RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
TRAPPC6B-202ENST00000347691 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
TRAPPC6B-202ENST00000347691 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
TRAPPC6B-202ENST00000347691 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
TRAPPC6B-202ENST00000347691 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC6B-202ENST00000347691 PANK1Q8TE04 598 aa12.9□□□□□ -0.34
TRAPPC6B-202ENST00000347691 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
TRAPPC6B-202ENST00000347691 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
TRAPPC6B-202ENST00000347691 CFAP70Q5T0N1 1121 aa12.9□□□□□ -0.34
TRAPPC6B-202ENST00000347691 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
TRAPPC6B-202ENST00000347691 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC6B-202ENST00000347691 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ADGRL1O94910 1474 aa12.89□□□□□ -0.35
TRAPPC6B-202ENST00000347691 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
TRAPPC6B-202ENST00000347691 NSD2O96028 1365 aa12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 FANCAO15360 1455 aa12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ZC3H13Q5T200 1668 aaKnown RBP12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
TRAPPC6B-202ENST00000347691 EIF5BO60841 1220 aaKnown RBP12.87□□□□□ -0.35
TRAPPC6B-202ENST00000347691 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ERCC6L2Q5T890 1561 aa12.87□□□□□ -0.35
TRAPPC6B-202ENST00000347691 TCP11L2Q8N4U5 519 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ADGRF5Q8IZF2 1346 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 MROH1Q8NDA8 1641 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 KIF3BO15066 747 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ANTXR1Q9H6X2 564 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ADGRB3O60242 1522 aa12.85□□□□□ -0.35
TRAPPC6B-202ENST00000347691 SEC24BO95487 1268 aa12.85□□□□□ -0.35
TRAPPC6B-202ENST00000347691 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-202ENST00000347691 MROH2AA6NES4 1674 aa12.84□□□□□ -0.35
TRAPPC6B-202ENST00000347691 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
TRAPPC6B-202ENST00000347691 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-202ENST00000347691 PLEKHG5O94827 1062 aa12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 POGKQ9P215 609 aa12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ADGRB2O60241 1585 aa12.82□□□□□ -0.36
TRAPPC6B-202ENST00000347691 PPLO60437 1756 aa12.82□□□□□ -0.36
TRAPPC6B-202ENST00000347691 NEUROD2Q15784 382 aa12.82□□□□□ -0.36
TRAPPC6B-202ENST00000347691 CHMP5Q9NZZ3 219 aa12.82□□□□□ -0.36
TRAPPC6B-202ENST00000347691 PPRC1Q5VV67 1664 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-202ENST00000347691 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 NOS1P29475 1434 aa12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ISY1Q9ULR0 285 aaKnown RBP12.81□□□□□ -0.36
TRAPPC6B-202ENST00000347691 RLBP1P12271 317 aa12.8□□□□□ -0.36
TRAPPC6B-202ENST00000347691 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-202ENST00000347691 DDX19BQ9UMR2 479 aa12.8□□□□□ -0.36
TRAPPC6B-202ENST00000347691 MTHFSP49914 203 aa12.8□□□□□ -0.36
TRAPPC6B-202ENST00000347691 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ABCC11Q96J66 1382 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 MCM4P33991 863 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 C22orf23Q9BZE7 217 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 ADGRB1O14514 1584 aa12.79□□□□□ -0.36
TRAPPC6B-202ENST00000347691 IL16Q14005 1332 aa12.78□□□□□ -0.36
TRAPPC6B-202ENST00000347691 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
TRAPPC6B-202ENST00000347691 PTMSP20962 102 aa12.78□□□□□ -0.36
TRAPPC6B-202ENST00000347691 HSCBQ8IWL3 235 aa12.78□□□□□ -0.36
TRAPPC6B-202ENST00000347691 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.36
TRAPPC6B-202ENST00000347691 PNNQ9H307 717 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6B-202ENST00000347691 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC6B-202ENST00000347691 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.377e-8■■□□□ 12.2
TRAPPC6B-202ENST00000347691 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
TRAPPC6B-202ENST00000347691 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
TRAPPC6B-202ENST00000347691 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-202ENST00000347691 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
TRAPPC6B-202ENST00000347691 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
TRAPPC6B-202ENST00000347691 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
TRAPPC6B-202ENST00000347691 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
TRAPPC6B-202ENST00000347691 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
TRAPPC6B-202ENST00000347691 MRE11P49959 708 aa12.75□□□□□ -0.37
TRAPPC6B-202ENST00000347691 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 GLI2P10070 1586 aa12.74□□□□□ -0.37
TRAPPC6B-202ENST00000347691 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
TRAPPC6B-202ENST00000347691 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TNNQ9UQP3 1299 aa12.73□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ARHGEF28Q8N1W1 1705 aaKnown RBP12.73□□□□□ -0.37
TRAPPC6B-202ENST00000347691 SNX21Q969T3 373 aa12.73□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TRAK2O60296 914 aa12.72□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms