RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CABP2Q9NPB3 220 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 ABCC3O15438 1527 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 TULP4Q9NRJ4 1543 aa7.97□□□□□ -1.13
CLCN3-201ENST00000347613 CAMSAP1Q5T5Y3 1602 aa7.96□□□□□ -1.13
CLCN3-201ENST00000347613 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
CLCN3-201ENST00000347613 HECW2Q9P2P5 1572 aa7.96□□□□□ -1.14
CLCN3-201ENST00000347613 NPC1L1Q9UHC9 1359 aa7.96□□□□□ -1.14
CLCN3-201ENST00000347613 IDI1Q13907 227 aa7.96□□□□□ -1.14
CLCN3-201ENST00000347613 FBXO31Q5XUX0 539 aaPredicted RBP7.96□□□□□ -1.14
CLCN3-201ENST00000347613 WWC1Q8IX03 1113 aa7.96□□□□□ -1.14
CLCN3-201ENST00000347613 ARHGEF28Q8N1W1 1705 aaKnown RBP7.96□□□□□ -1.14
CLCN3-201ENST00000347613 PANK1Q8TE04 598 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 GLI2P10070 1586 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 RLBP1P12271 317 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 NEXMIFQ5QGS0 1516 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 LAS1LQ9Y4W2 734 aaKnown RBP7.95□□□□□ -1.14
CLCN3-201ENST00000347613 PIK3C2BO00750 1634 aa7.95□□□□□ -1.14
CLCN3-201ENST00000347613 MLH3Q9UHC1 1453 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 TCERG1O14776 1098 aaKnown RBP7.94□□□□□ -1.14
CLCN3-201ENST00000347613 MTHFSP49914 203 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 BCL2L13Q9BXK5 485 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 STK26Q9P289 416 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 SETBP1Q9Y6X0 1596 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
CLCN3-201ENST00000347613 DIP2CQ9Y2E4 1556 aa7.94□□□□□ -1.14
CLCN3-201ENST00000347613 EIF3AQ14152 1382 aaKnown RBP7.94□□□□□ -1.14
CLCN3-201ENST00000347613 SEC24BO95487 1268 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 TAOK2Q9UL54 1235 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 RIMBP3CA6NJZ7 1639 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 RIMBP3BA6NNM3 1639 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 RIMBP3Q9UFD9 1639 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 NKTRP30414 1462 aaKnown RBP7.93□□□□□ -1.14
CLCN3-201ENST00000347613 RICTORQ6R327 1708 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 IQSEC2Q5JU85 1478 aa7.93□□□□□ -1.14
CLCN3-201ENST00000347613 CDCA8Q53HL2 280 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 TCP11L2Q8N4U5 519 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 RGS3P49796 1198 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 COG6Q9Y2V7 657 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 POLR3AO14802 1390 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-201ENST00000347613 MORC1Q86VD1 984 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 STAC3Q96MF2 364 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 ZBTB47Q9UFB7 747 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-201ENST00000347613 KIF13AQ9H1H9 1805 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 SBNO2Q9Y2G9 1366 aa7.92□□□□□ -1.14
CLCN3-201ENST00000347613 CD163L1Q9NR16 1453 aa7.91□□□□□ -1.14
CLCN3-201ENST00000347613 ANP32AP39687 249 aaKnown RBP7.91□□□□□ -1.14
CLCN3-201ENST00000347613 PHF23Q9BUL5 403 aaPredicted RBP7.91□□□□□ -1.14
CLCN3-201ENST00000347613 GGNBP2Q9H3C7 697 aa7.91□□□□□ -1.14
CLCN3-201ENST00000347613 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
CLCN3-201ENST00000347613 USP19O94966 1318 aa7.9□□□□□ -1.14
CLCN3-201ENST00000347613 TSR2Q969E8 191 aaKnown RBP7.9□□□□□ -1.14
CLCN3-201ENST00000347613 A0A1W2PP64 1363 aa7.9□□□□□ -1.14
CLCN3-201ENST00000347613 MS4A1P11836 297 aa7.9□□□□□ -1.15
CLCN3-201ENST00000347613 TMEM131LA2VDJ0 1609 aa7.89□□□□□ -1.15
CLCN3-201ENST00000347613 FRAT1Q92837 279 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-201ENST00000347613 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
CLCN3-201ENST00000347613 PTPRMP28827 1452 aa7.89□□□□□ -1.15
CLCN3-201ENST00000347613 MINK1Q8N4C8 1332 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-201ENST00000347613 NCKAP5LQ9HCH0 1330 aa7.89□□□□□ -1.15
CLCN3-201ENST00000347613 RARSP54136 660 aaKnown RBP7.89□□□□□ -1.15
CLCN3-201ENST00000347613 E9PSI1 815 aa7.89□□□□□ -1.15
CLCN3-201ENST00000347613 NPM1P06748 294 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLCN3-201ENST00000347613 PLEKHF1Q96S99 279 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 NLRP1Q9C000 1473 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 PREX1Q8TCU6 1659 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 CENPQQ7L2Z9 268 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-201ENST00000347613 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 TSPOAP1O95153 1857 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 FYB1O15117 783 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 PRAM1Q96QH2 718 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 TRIM35Q9UPQ4 493 aa7.88□□□□□ -1.15
CLCN3-201ENST00000347613 ZRANB1Q9UGI0 708 aa7.87□□□□□ -1.15
CLCN3-201ENST00000347613 COL3A1P02461 1466 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-201ENST00000347613 RUNDC1Q96C34 613 aa7.87□□□□□ -1.15
CLCN3-201ENST00000347613 USP32Q8NFA0 1604 aa7.87□□□□□ -1.15
CLCN3-201ENST00000347613 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
CLCN3-201ENST00000347613 U2AF1L5P0DN76 240 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-201ENST00000347613 U2AF1Q01081 240 aaKnown RBP eCLIP7.85□□□□□ -1.158e-8■■■■□ 19.8
CLCN3-201ENST00000347613 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
CLCN3-201ENST00000347613 CFAP74Q9C0B2 1584 aa7.85□□□□□ -1.15
CLCN3-201ENST00000347613 SRPK2P78362 688 aaKnown RBP7.85□□□□□ -1.15
CLCN3-201ENST00000347613 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
CLCN3-201ENST00000347613 CGNL1Q0VF96 1302 aa7.85□□□□□ -1.15
CLCN3-201ENST00000347613 VGFO15240 615 aaPredicted RBP7.84□□□□□ -1.15
CLCN3-201ENST00000347613 RPGRIP1LQ68CZ1 1315 aa7.84□□□□□ -1.15
CLCN3-201ENST00000347613 EVC2Q86UK5 1308 aa7.84□□□□□ -1.15
CLCN3-201ENST00000347613 ALKQ9UM73 1620 aa7.84□□□□□ -1.15
CLCN3-201ENST00000347613 FAM161AQ3B820 660 aa7.84□□□□□ -1.15
CLCN3-201ENST00000347613 VIRMAQ69YN4 1812 aaKnown RBP7.84□□□□□ -1.15
CLCN3-201ENST00000347613 NEO1Q92859 1461 aa7.84□□□□□ -1.15
CLCN3-201ENST00000347613 ABCC11Q96J66 1382 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 NEFMP07197 916 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 ARHGAP31Q2M1Z3 1444 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 THUMPD2Q9BTF0 503 aaKnown RBP7.83□□□□□ -1.16
CLCN3-201ENST00000347613 CDK19Q9BWU1 502 aa7.83□□□□□ -1.16
CLCN3-201ENST00000347613 YTHDC2Q9H6S0 1430 aaKnown RBP7.83□□□□□ -1.16
CLCN3-201ENST00000347613 SETD1AO15047 1707 aaKnown RBP7.83□□□□□ -1.16
CLCN3-201ENST00000347613 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
CLCN3-201ENST00000347613 EXOSC9Q06265 439 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms