RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 NOL10Q9BSC4 688 aaKnown RBP20.88■□□□□ 0.93
ARID1B-202ENST00000346085 ZKSCAN1P17029 563 aaPredicted RBP20.88■□□□□ 0.93
ARID1B-202ENST00000346085 FILIP1LQ4L180 1135 aa20.88■□□□□ 0.93
ARID1B-202ENST00000346085 RNF214Q8ND24 703 aa20.87■□□□□ 0.93
ARID1B-202ENST00000346085 GOLGA6L9A6NEM1 432 aa20.87■□□□□ 0.93
ARID1B-202ENST00000346085 DZIP1Q86YF9 867 aaKnown RBP20.87■□□□□ 0.93
ARID1B-202ENST00000346085 PAF1Q8N7H5 531 aa20.87■□□□□ 0.93
ARID1B-202ENST00000346085 ZNHIT6Q9NWK9 470 aaKnown RBP20.87■□□□□ 0.93
ARID1B-202ENST00000346085 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
ARID1B-202ENST00000346085 LRRFIP1Q32MZ4 808 aaKnown RBP20.87■□□□□ 0.93
ARID1B-202ENST00000346085 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
ARID1B-202ENST00000346085 SYNE3Q6ZMZ3 975 aa20.86■□□□□ 0.93
ARID1B-202ENST00000346085 TCEAL9Q9UHQ7 104 aa20.86■□□□□ 0.93
ARID1B-202ENST00000346085 SEPT14Q6ZU15 432 aa20.85■□□□□ 0.93
ARID1B-202ENST00000346085 KINO60870 393 aaKnown RBP20.85■□□□□ 0.93
ARID1B-202ENST00000346085 BRD2P25440 801 aaKnown RBP20.85■□□□□ 0.93
ARID1B-202ENST00000346085 PIP4K2AP48426 406 aaPredicted RBP20.85■□□□□ 0.93
ARID1B-202ENST00000346085 SMC3Q9UQE7 1217 aa20.85■□□□□ 0.93
ARID1B-202ENST00000346085 TXLNAP40222 546 aa20.85■□□□□ 0.93
ARID1B-202ENST00000346085 PLEKHD1A6NEE1 506 aa20.84■□□□□ 0.93
ARID1B-202ENST00000346085 CCDC192P0DO97 292 aa20.84■□□□□ 0.93
ARID1B-202ENST00000346085 RNF187Q5TA31 235 aaPredicted RBP20.84■□□□□ 0.93
ARID1B-202ENST00000346085 GIGYF2Q6Y7W6 1299 aaKnown RBP20.84■□□□□ 0.93
ARID1B-202ENST00000346085 FBXW7Q969H0 707 aa20.84■□□□□ 0.93
ARID1B-202ENST00000346085 ZFYVE27Q5T4F4 411 aa20.84■□□□□ 0.93
ARID1B-202ENST00000346085 SPC24Q8NBT2 197 aa20.84■□□□□ 0.93
ARID1B-202ENST00000346085 IBSPP21815 317 aaPredicted RBP20.83■□□□□ 0.93
ARID1B-202ENST00000346085 TTC31Q49AM3 519 aaPredicted RBP20.83■□□□□ 0.93
ARID1B-202ENST00000346085 GTF2F1P35269 517 aaKnown RBP eCLIP20.83■□□□□ 0.925e-14■■■■□ 22.8
ARID1B-202ENST00000346085 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
ARID1B-202ENST00000346085 PPP4R3BQ5MIZ7 849 aa20.82■□□□□ 0.92
ARID1B-202ENST00000346085 MIPOL1Q8TD10 442 aa20.82■□□□□ 0.92
ARID1B-202ENST00000346085 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.82■□□□□ 0.92
ARID1B-202ENST00000346085 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
ARID1B-202ENST00000346085 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
ARID1B-202ENST00000346085 VPS37CA5D8V6 355 aaPredicted RBP20.81■□□□□ 0.92
ARID1B-202ENST00000346085 SDF4Q9BRK5 362 aa20.81■□□□□ 0.92
ARID1B-202ENST00000346085 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.81■□□□□ 0.925e-7■■■■■ 42.9
ARID1B-202ENST00000346085 V9GYY5 206 aaPredicted RBP20.81■□□□□ 0.92
ARID1B-202ENST00000346085 CPLX1O14810 134 aa20.8■□□□□ 0.92
ARID1B-202ENST00000346085 SPECC1LQ69YQ0 1117 aa20.8■□□□□ 0.92
ARID1B-202ENST00000346085 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
ARID1B-202ENST00000346085 MORC1Q86VD1 984 aa20.8■□□□□ 0.92
ARID1B-202ENST00000346085 FILIP1Q7Z7B0 1213 aa20.8■□□□□ 0.92
ARID1B-202ENST00000346085 CEP83Q9Y592 693 aa20.79■□□□□ 0.92
ARID1B-202ENST00000346085 HSPA4P34932 840 aa20.79■□□□□ 0.92
ARID1B-202ENST00000346085 RRP7BPQ9NSQ0 103 aa20.79■□□□□ 0.92
ARID1B-202ENST00000346085 SMC1AQ14683 1233 aaKnown RBP20.79■□□□□ 0.92
ARID1B-202ENST00000346085 PSMD1Q99460 953 aa20.79■□□□□ 0.92
ARID1B-202ENST00000346085 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
ARID1B-202ENST00000346085 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
ARID1B-202ENST00000346085 C6orf163Q5TEZ5 329 aa20.78■□□□□ 0.92
ARID1B-202ENST00000346085 TRIM34Q9BYJ4 488 aa20.78■□□□□ 0.92
ARID1B-202ENST00000346085 DDX46Q7L014 1031 aaKnown RBP20.78■□□□□ 0.92
ARID1B-202ENST00000346085 RSRC1Q96IZ7 334 aaKnown RBP20.78■□□□□ 0.92
ARID1B-202ENST00000346085 MAGEC2Q9UBF1 373 aaPredicted RBP20.78■□□□□ 0.92
ARID1B-202ENST00000346085 NAP1L3Q99457 506 aaPredicted RBP20.78■□□□□ 0.92
ARID1B-202ENST00000346085 LRRFIP2Q9Y608 721 aaKnown RBP20.78■□□□□ 0.92
ARID1B-202ENST00000346085 GOLIM4O00461 696 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 RILPL2Q969X0 211 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 PPFIBP1Q86W92 1011 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 CBFA2T2O43439 604 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 KRI1Q8N9T8 703 aaKnown RBP20.77■□□□□ 0.92
ARID1B-202ENST00000346085 POTEB2H3BUK9 544 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 KIF18AQ8NI77 898 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 C22orf23Q9BZE7 217 aa20.77■□□□□ 0.92
ARID1B-202ENST00000346085 SAFBQ15424 915 aaKnown RBP eCLIP20.76■□□□□ 0.91
ARID1B-202ENST00000346085 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
ARID1B-202ENST00000346085 A0A1B0GUA9 196 aa20.76■□□□□ 0.91
ARID1B-202ENST00000346085 RRP1P56182 461 aaKnown RBP20.76■□□□□ 0.91
ARID1B-202ENST00000346085 TOMM22Q9NS69 142 aa20.76■□□□□ 0.91
ARID1B-202ENST00000346085 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
ARID1B-202ENST00000346085 GBP6Q6ZN66 633 aa20.76■□□□□ 0.91
ARID1B-202ENST00000346085 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
ARID1B-202ENST00000346085 ZFYP08048 801 aaPredicted RBP20.76■□□□□ 0.91
ARID1B-202ENST00000346085 ANKRD18BA2A2Z9 1011 aa20.75■□□□□ 0.91
ARID1B-202ENST00000346085 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
ARID1B-202ENST00000346085 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
ARID1B-202ENST00000346085 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
ARID1B-202ENST00000346085 PDCP20941 246 aa20.74■□□□□ 0.91
ARID1B-202ENST00000346085 KRT222Q8N1A0 295 aa20.74■□□□□ 0.91
ARID1B-202ENST00000346085 ANO2Q9NQ90 1003 aa20.74■□□□□ 0.91
ARID1B-202ENST00000346085 RGL3Q3MIN7 710 aa20.73■□□□□ 0.91
ARID1B-202ENST00000346085 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
ARID1B-202ENST00000346085 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
ARID1B-202ENST00000346085 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
ARID1B-202ENST00000346085 MYZAPP0CAP1 466 aa20.72■□□□□ 0.91
ARID1B-202ENST00000346085 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
ARID1B-202ENST00000346085 JAKMIP3Q5VZ66 844 aa20.72■□□□□ 0.91
ARID1B-202ENST00000346085 SYCP1Q15431 976 aa20.71■□□□□ 0.91
ARID1B-202ENST00000346085 DNAJC21Q5F1R6 531 aaKnown RBP20.71■□□□□ 0.91
ARID1B-202ENST00000346085 ARID4AP29374 1257 aaPredicted RBP20.71■□□□□ 0.91
ARID1B-202ENST00000346085 CCDC160A6NGH7 325 aa20.71■□□□□ 0.91
ARID1B-202ENST00000346085 LMAN1P49257 510 aa20.7■□□□□ 0.9
ARID1B-202ENST00000346085 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
ARID1B-202ENST00000346085 MCM5P33992 734 aa20.7■□□□□ 0.9
ARID1B-202ENST00000346085 NUP133Q8WUM0 1156 aa20.7■□□□□ 0.9
ARID1B-202ENST00000346085 MSL1Q68DK7 614 aa20.7■□□□□ 0.9
ARID1B-202ENST00000346085 SERPINC1P01008 464 aa20.7■□□□□ 0.9
ARID1B-202ENST00000346085 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms