RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 WAPLQ7Z5K2 1190 aa26.01■■□□□ 1.75
CKLF-202ENST00000345436 ORAI2Q96SN7 254 aa26.01■■□□□ 1.75
CKLF-202ENST00000345436 SHPRHQ149N8 1683 aa25.99■■□□□ 1.75
CKLF-202ENST00000345436 YTHDC2Q9H6S0 1430 aaKnown RBP25.99■■□□□ 1.75
CKLF-202ENST00000345436 MYOM2P54296 1465 aa25.98■■□□□ 1.75
CKLF-202ENST00000345436 NPHP3Q7Z494 1330 aa25.98■■□□□ 1.75
CKLF-202ENST00000345436 CFAP70Q5T0N1 1121 aa25.98■■□□□ 1.75
CKLF-202ENST00000345436 DDX17Q92841 729 aaKnown RBP25.98■■□□□ 1.75
CKLF-202ENST00000345436 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
CKLF-202ENST00000345436 NHSL1Q5SYE7 1610 aa25.96■■□□□ 1.75
CKLF-202ENST00000345436 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.75
CKLF-202ENST00000345436 DCAF11Q8TEB1 546 aa25.95■■□□□ 1.74
CKLF-202ENST00000345436 NRXN1Q9ULB1 1477 aa25.94■■□□□ 1.74
CKLF-202ENST00000345436 KDM2AQ9Y2K7 1162 aa25.94■■□□□ 1.74
CKLF-202ENST00000345436 LRP6O75581 1613 aa25.93■■□□□ 1.74
CKLF-202ENST00000345436 POGKQ9P215 609 aa25.93■■□□□ 1.74
CKLF-202ENST00000345436 CDC42BPGQ6DT37 1551 aa25.93■■□□□ 1.74
CKLF-202ENST00000345436 PNPLA6Q8IY17 1366 aa25.93■■□□□ 1.74
CKLF-202ENST00000345436 LAMC1P11047 1609 aa25.9■■□□□ 1.74
CKLF-202ENST00000345436 NUTM2FA1L443 756 aa25.89■■□□□ 1.74
CKLF-202ENST00000345436 FOXO3O43524 673 aa25.89■■□□□ 1.74
CKLF-202ENST00000345436 RXRBP28702 533 aa25.89■■□□□ 1.74
CKLF-202ENST00000345436 C8orf37Q96NL8 207 aa25.89■■□□□ 1.74
CKLF-202ENST00000345436 PRAM1Q96QH2 718 aa25.88■■□□□ 1.73
CKLF-202ENST00000345436 AFF2P51816 1311 aa25.88■■□□□ 1.73
CKLF-202ENST00000345436 PLEKHH1Q9ULM0 1364 aa25.87■■□□□ 1.73
CKLF-202ENST00000345436 NGLY1Q96IV0 654 aa25.87■■□□□ 1.73
CKLF-202ENST00000345436 KNDC1Q76NI1 1749 aa25.87■■□□□ 1.73
CKLF-202ENST00000345436 ADAMTS2O95450 1211 aa25.85■■□□□ 1.73
CKLF-202ENST00000345436 PSME1Q06323 249 aa25.83■■□□□ 1.73
CKLF-202ENST00000345436 SAFB2Q14151 953 aaKnown RBP eCLIP25.83■■□□□ 1.73
CKLF-202ENST00000345436 TRAK1Q9UPV9 953 aa25.83■■□□□ 1.73
CKLF-202ENST00000345436 QTRT2Q9H974 415 aaKnown RBP25.81■■□□□ 1.72
CKLF-202ENST00000345436 PHF8Q9UPP1 1060 aa25.8■■□□□ 1.72
CKLF-202ENST00000345436 DLC1Q96QB1 1528 aa25.79■■□□□ 1.72
CKLF-202ENST00000345436 XPCQ01831 940 aaPredicted RBP25.78■■□□□ 1.72
CKLF-202ENST00000345436 KRT28Q7Z3Y7 464 aa25.78■■□□□ 1.72
CKLF-202ENST00000345436 EIF3AQ14152 1382 aaKnown RBP25.78■■□□□ 1.72
CKLF-202ENST00000345436 RBM6P78332 1123 aaKnown RBP25.77■■□□□ 1.72
CKLF-202ENST00000345436 USP21Q9UK80 565 aa25.75■■□□□ 1.71
CKLF-202ENST00000345436 PXDNQ92626 1479 aa25.74■■□□□ 1.71
CKLF-202ENST00000345436 TRPC5Q9UL62 973 aaPredicted RBP25.73■■□□□ 1.71
CKLF-202ENST00000345436 FMN2Q9NZ56 1722 aa25.72■■□□□ 1.71
CKLF-202ENST00000345436 SPATA31A3Q5VYP0 1347 aa25.72■■□□□ 1.71
CKLF-202ENST00000345436 HAP1P54257 671 aaPredicted RBP25.72■■□□□ 1.71
CKLF-202ENST00000345436 FNBP4Q8N3X1 1017 aaPredicted RBP25.72■■□□□ 1.71
CKLF-202ENST00000345436 CDK12Q9NYV4 1490 aaPredicted RBP25.72■■□□□ 1.71
CKLF-202ENST00000345436 ANKARQ7Z5J8 1434 aa25.71■■□□□ 1.71
CKLF-202ENST00000345436 KIF1AQ12756 1690 aa25.71■■□□□ 1.71
CKLF-202ENST00000345436 MINK1Q8N4C8 1332 aaPredicted RBP25.71■■□□□ 1.71
CKLF-202ENST00000345436 ADGRB1O14514 1584 aa25.71■■□□□ 1.71
CKLF-202ENST00000345436 HIRIP3Q9BW71 556 aaPredicted RBP25.7■■□□□ 1.7
CKLF-202ENST00000345436 WASLO00401 505 aaPredicted RBP25.69■■□□□ 1.7
CKLF-202ENST00000345436 COL22A1Q8NFW1 1626 aaPredicted RBP25.67■■□□□ 1.7
CKLF-202ENST00000345436 LMOD2Q6P5Q4 547 aa25.67■■□□□ 1.7
CKLF-202ENST00000345436 PMFBP1Q8TBY8 1022 aa25.66■■□□□ 1.7
CKLF-202ENST00000345436 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
CKLF-202ENST00000345436 GPRASP1Q5JY77 1395 aa25.66■■□□□ 1.7
CKLF-202ENST00000345436 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
CKLF-202ENST00000345436 TNS3Q68CZ2 1445 aa25.63■■□□□ 1.69
CKLF-202ENST00000345436 NGDNQ8NEJ9 315 aaKnown RBP25.62■■□□□ 1.69
CKLF-202ENST00000345436 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
CKLF-202ENST00000345436 UPF1Q92900 1129 aaKnown RBP eCLIP25.6■■□□□ 1.69
CKLF-202ENST00000345436 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
CKLF-202ENST00000345436 NUDT16Q96DE0 195 aaKnown RBP25.57■■□□□ 1.68
CKLF-202ENST00000345436 TULP4Q9NRJ4 1543 aa25.57■■□□□ 1.68
CKLF-202ENST00000345436 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
CKLF-202ENST00000345436 ATRNO75882 1429 aa25.55■■□□□ 1.68
CKLF-202ENST00000345436 GJD4Q96KN9 370 aaPredicted RBP25.55■■□□□ 1.68
CKLF-202ENST00000345436 PAK3O75914 559 aaPredicted RBP25.54■■□□□ 1.68
CKLF-202ENST00000345436 PLEKHG5O94827 1062 aa25.54■■□□□ 1.68
CKLF-202ENST00000345436 L3MBTL2Q969R5 705 aa25.54■■□□□ 1.68
CKLF-202ENST00000345436 PRR36Q9H6K5 1346 aa25.54■■□□□ 1.68
CKLF-202ENST00000345436 NEUROD1Q13562 356 aa25.53■■□□□ 1.68
CKLF-202ENST00000345436 NBPF1Q3BBV0 1214 aa25.53■■□□□ 1.68
CKLF-202ENST00000345436 CCDC61Q9Y6R9 512 aa25.53■■□□□ 1.68
CKLF-202ENST00000345436 KIAA1210Q9ULL0 1709 aa25.53■■□□□ 1.68
CKLF-202ENST00000345436 RGPD8O14715 1765 aaPredicted RBP25.53■■□□□ 1.68
CKLF-202ENST00000345436 RGS12O14924 1447 aa25.53■■□□□ 1.68
CKLF-202ENST00000345436 CABLES1Q8TDN4 633 aa25.52■■□□□ 1.68
CKLF-202ENST00000345436 BCL9LQ86UU0 1499 aa25.52■■□□□ 1.68
CKLF-202ENST00000345436 ATAD2Q6PL18 1390 aa25.5■■□□□ 1.67
CKLF-202ENST00000345436 CENPJQ9HC77 1338 aaPredicted RBP25.5■■□□□ 1.67
CKLF-202ENST00000345436 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
CKLF-202ENST00000345436 USP32Q8NFA0 1604 aa25.48■■□□□ 1.67
CKLF-202ENST00000345436 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
CKLF-202ENST00000345436 ARHGEF28Q8N1W1 1705 aaKnown RBP25.46■■□□□ 1.67
CKLF-202ENST00000345436 MARF1Q9Y4F3 1742 aaKnown RBP25.46■■□□□ 1.67
CKLF-202ENST00000345436 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
CKLF-202ENST00000345436 SLIT2O94813 1529 aa25.46■■□□□ 1.67
CKLF-202ENST00000345436 PLEKHG3A1L390 1219 aa25.45■■□□□ 1.66
CKLF-202ENST00000345436 VPS72Q15906 364 aa25.44■■□□□ 1.66
CKLF-202ENST00000345436 FAM83GA6ND36 823 aa25.43■■□□□ 1.66
CKLF-202ENST00000345436 NBPF8Q3BBV2 869 aa25.43■■□□□ 1.66
CKLF-202ENST00000345436 ATP7BP35670 1465 aa25.42■■□□□ 1.66
CKLF-202ENST00000345436 CCDC125Q86Z20 511 aa25.42■■□□□ 1.66
CKLF-202ENST00000345436 ACEP12821 1306 aa25.41■■□□□ 1.66
CKLF-202ENST00000345436 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
CKLF-202ENST00000345436 ITSN1Q15811 1721 aa25.4■■□□□ 1.66
CKLF-202ENST00000345436 POLR3AO14802 1390 aaPredicted RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 246.4 ms