RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 ZMYM3Q14202 1370 aa24.67■■□□□ 1.54
RBM38-202ENST00000344785 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
RBM38-202ENST00000344785 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
RBM38-202ENST00000344785 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
RBM38-202ENST00000344785 TNNT2P45379 298 aaPredicted RBP24.64■■□□□ 1.54
RBM38-202ENST00000344785 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.53
RBM38-202ENST00000344785 RCAN3Q9UKA8 241 aa24.63■■□□□ 1.53
RBM38-202ENST00000344785 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
RBM38-202ENST00000344785 MORC1Q86VD1 984 aa24.61■■□□□ 1.53
RBM38-202ENST00000344785 ANKRD36BQ8N2N9 1353 aa24.6■■□□□ 1.53
RBM38-202ENST00000344785 ZNF521Q96K83 1311 aa24.6■■□□□ 1.53
RBM38-202ENST00000344785 SRPK2P78362 688 aaKnown RBP24.6■■□□□ 1.53
RBM38-202ENST00000344785 RRP1P56182 461 aaKnown RBP24.59■■□□□ 1.53
RBM38-202ENST00000344785 POGKQ9P215 609 aa24.59■■□□□ 1.53
RBM38-202ENST00000344785 ESF1Q9H501 851 aaKnown RBP24.57■■□□□ 1.52
RBM38-202ENST00000344785 WAPLQ7Z5K2 1190 aa24.57■■□□□ 1.52
RBM38-202ENST00000344785 CGNL1Q0VF96 1302 aa24.57■■□□□ 1.52
RBM38-202ENST00000344785 POLR3AO14802 1390 aaPredicted RBP24.56■■□□□ 1.52
RBM38-202ENST00000344785 A0A1W2PP64 1363 aa24.56■■□□□ 1.52
RBM38-202ENST00000344785 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
RBM38-202ENST00000344785 APAF1O14727 1248 aa24.55■■□□□ 1.52
RBM38-202ENST00000344785 SETD1AO15047 1707 aaKnown RBP24.54■■□□□ 1.52
RBM38-202ENST00000344785 CDK19Q9BWU1 502 aa24.53■■□□□ 1.52
RBM38-202ENST00000344785 DUSP27Q5VZP5 1158 aa24.52■■□□□ 1.52
RBM38-202ENST00000344785 CD163L1Q9NR16 1453 aa24.52■■□□□ 1.52
RBM38-202ENST00000344785 NRXN3Q9Y4C0 1643 aa24.52■■□□□ 1.52
RBM38-202ENST00000344785 MTHFSP49914 203 aa24.52■■□□□ 1.52
RBM38-202ENST00000344785 SPINK5Q9NQ38 1064 aaPredicted RBP24.52■■□□□ 1.52
RBM38-202ENST00000344785 METP08581 1390 aa24.51■■□□□ 1.51
RBM38-202ENST00000344785 PLIN1O60240 522 aa24.5■■□□□ 1.51
RBM38-202ENST00000344785 TNRQ92752 1358 aa24.5■■□□□ 1.51
RBM38-202ENST00000344785 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
RBM38-202ENST00000344785 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
RBM38-202ENST00000344785 RBM19Q9Y4C8 960 aaKnown RBP24.49■■□□□ 1.51
RBM38-202ENST00000344785 DMRT2Q9Y5R5 561 aa24.48■■□□□ 1.51
RBM38-202ENST00000344785 ATAD2Q6PL18 1390 aa24.48■■□□□ 1.51
RBM38-202ENST00000344785 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
RBM38-202ENST00000344785 CEBPAP49715 358 aaPredicted RBP24.47■■□□□ 1.51
RBM38-202ENST00000344785 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
RBM38-202ENST00000344785 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
RBM38-202ENST00000344785 CABP1Q9NZU7 370 aa24.46■■□□□ 1.51
RBM38-202ENST00000344785 NINLQ9Y2I6 1382 aa24.46■■□□□ 1.51
RBM38-202ENST00000344785 SLFN5Q08AF3 891 aa24.46■■□□□ 1.51
RBM38-202ENST00000344785 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
RBM38-202ENST00000344785 CCDC136Q96JN2 1154 aa24.45■■□□□ 1.5
RBM38-202ENST00000344785 FYB1O15117 783 aa24.44■■□□□ 1.5
RBM38-202ENST00000344785 NSD2O96028 1365 aa24.44■■□□□ 1.5
RBM38-202ENST00000344785 TRMT2AQ8IZ69 625 aaKnown RBP24.44■■□□□ 1.5
RBM38-202ENST00000344785 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
RBM38-202ENST00000344785 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
RBM38-202ENST00000344785 NLRP1Q9C000 1473 aa24.42■■□□□ 1.5
RBM38-202ENST00000344785 TERF2IPQ9NYB0 399 aa24.42■■□□□ 1.5
RBM38-202ENST00000344785 TMEM2Q9UHN6 1383 aa24.41■■□□□ 1.5
RBM38-202ENST00000344785 UBR1Q8IWV7 1749 aa24.4■■□□□ 1.5
RBM38-202ENST00000344785 C20orf194Q5TEA3 1177 aa24.39■■□□□ 1.49
RBM38-202ENST00000344785 LTKP29376 864 aa24.38■■□□□ 1.49
RBM38-202ENST00000344785 RRP7AQ9Y3A4 280 aaKnown RBP24.37■■□□□ 1.49
RBM38-202ENST00000344785 WWC1Q8IX03 1113 aa24.36■■□□□ 1.49
RBM38-202ENST00000344785 NCKAP5LQ9HCH0 1330 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 RUNDC1Q96C34 613 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 HDGFL2Q7Z4V5 671 aaPredicted RBP24.35■■□□□ 1.49
RBM38-202ENST00000344785 TCP11L2Q8N4U5 519 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 CFAP53Q96M91 514 aa24.35■■□□□ 1.49
RBM38-202ENST00000344785 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
RBM38-202ENST00000344785 CRBNQ96SW2 442 aa24.33■■□□□ 1.49
RBM38-202ENST00000344785 ADAMTS13Q76LX8 1427 aa24.33■■□□□ 1.49
RBM38-202ENST00000344785 IQSEC2Q5JU85 1478 aa24.33■■□□□ 1.49
RBM38-202ENST00000344785 FBLN1P23142 703 aa24.33■■□□□ 1.48
RBM38-202ENST00000344785 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.48
RBM38-202ENST00000344785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.32■■□□□ 1.48
RBM38-202ENST00000344785 TECPR2O15040 1411 aa24.31■■□□□ 1.48
RBM38-202ENST00000344785 E9PSI1 815 aa24.3■■□□□ 1.48
RBM38-202ENST00000344785 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
RBM38-202ENST00000344785 TRHP20396 242 aaPredicted RBP24.3■■□□□ 1.48
RBM38-202ENST00000344785 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
RBM38-202ENST00000344785 MED14O60244 1454 aa24.3■■□□□ 1.48
RBM38-202ENST00000344785 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
RBM38-202ENST00000344785 NGEFQ8N5V2 710 aa24.29■■□□□ 1.48
RBM38-202ENST00000344785 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
RBM38-202ENST00000344785 COL3A1P02461 1466 aaPredicted RBP24.29■■□□□ 1.48
RBM38-202ENST00000344785 NKTRP30414 1462 aaKnown RBP24.28■■□□□ 1.48
RBM38-202ENST00000344785 ANKRD26Q9UPS8 1709 aa24.28■■□□□ 1.48
RBM38-202ENST00000344785 FAM135BQ49AJ0 1406 aa24.28■■□□□ 1.48
RBM38-202ENST00000344785 SIRT1Q96EB6 747 aa24.27■■□□□ 1.48
RBM38-202ENST00000344785 NUDT16Q96DE0 195 aaKnown RBP24.27■■□□□ 1.48
RBM38-202ENST00000344785 C3P01024 1663 aa24.27■■□□□ 1.48
RBM38-202ENST00000344785 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
RBM38-202ENST00000344785 BCAR3O75815 825 aa24.26■■□□□ 1.47
RBM38-202ENST00000344785 ATP7BP35670 1465 aa24.26■■□□□ 1.47
RBM38-202ENST00000344785 CPSF1Q10570 1443 aaKnown RBP24.26■■□□□ 1.47
RBM38-202ENST00000344785 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
RBM38-202ENST00000344785 KNDC1Q76NI1 1749 aa24.26■■□□□ 1.47
RBM38-202ENST00000344785 CPS1P31327 1500 aa24.25■■□□□ 1.47
RBM38-202ENST00000344785 ZRANB1Q9UGI0 708 aa24.25■■□□□ 1.47
RBM38-202ENST00000344785 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
RBM38-202ENST00000344785 PLEKHG1Q9ULL1 1385 aa24.24■■□□□ 1.47
RBM38-202ENST00000344785 U2SURPO15042 1029 aaKnown RBP24.23■■□□□ 1.47
RBM38-202ENST00000344785 PLEKHF1Q96S99 279 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms