RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 EVC2Q86UK5 1308 aa22.58■■□□□ 1.21
CEACAM1-202ENST00000344391 HSPA2P54652 639 aa22.58■■□□□ 1.21
CEACAM1-202ENST00000344391 MIER1Q8N108 512 aa22.58■■□□□ 1.21
CEACAM1-202ENST00000344391 MINK1Q8N4C8 1332 aaPredicted RBP22.57■■□□□ 1.2
CEACAM1-202ENST00000344391 PUS7Q96PZ0 661 aaKnown RBP22.57■■□□□ 1.2
CEACAM1-202ENST00000344391 MYOM1P52179 1685 aa22.57■■□□□ 1.2
CEACAM1-202ENST00000344391 PTCH1Q13635 1447 aa22.56■■□□□ 1.2
CEACAM1-202ENST00000344391 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.52■■□□□ 1.2
CEACAM1-202ENST00000344391 STRCQ7RTU9 1775 aa22.52■■□□□ 1.19
CEACAM1-202ENST00000344391 KCNA6P17658 529 aa22.51■■□□□ 1.19
CEACAM1-202ENST00000344391 ANP32CO43423 234 aa22.49■■□□□ 1.19
CEACAM1-202ENST00000344391 PANK3Q9H999 370 aa22.49■■□□□ 1.19
CEACAM1-202ENST00000344391 CABP2Q9NPB3 220 aa22.49■■□□□ 1.19
CEACAM1-202ENST00000344391 CDK19Q9BWU1 502 aa22.49■■□□□ 1.19
CEACAM1-202ENST00000344391 ADGRB2O60241 1585 aa22.48■■□□□ 1.19
CEACAM1-202ENST00000344391 SRPK2P78362 688 aaKnown RBP22.48■■□□□ 1.19
CEACAM1-202ENST00000344391 NWD1Q149M9 1564 aa22.47■■□□□ 1.19
CEACAM1-202ENST00000344391 WASLO00401 505 aaPredicted RBP22.46■■□□□ 1.19
CEACAM1-202ENST00000344391 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
CEACAM1-202ENST00000344391 ATAD2Q6PL18 1390 aa22.45■■□□□ 1.18
CEACAM1-202ENST00000344391 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
CEACAM1-202ENST00000344391 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
CEACAM1-202ENST00000344391 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
CEACAM1-202ENST00000344391 PRKRIP1Q9H875 184 aaPredicted RBP22.41■■□□□ 1.18
CEACAM1-202ENST00000344391 STRCP1A6NGW2 1772 aa22.37■■□□□ 1.17
CEACAM1-202ENST00000344391 NKTRP30414 1462 aaKnown RBP22.37■■□□□ 1.17
CEACAM1-202ENST00000344391 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
CEACAM1-202ENST00000344391 ANKRD36BQ8N2N9 1353 aa22.37■■□□□ 1.17
CEACAM1-202ENST00000344391 NUDT16Q96DE0 195 aaKnown RBP22.36■■□□□ 1.17
CEACAM1-202ENST00000344391 CARD14Q9BXL6 1004 aa22.36■■□□□ 1.17
CEACAM1-202ENST00000344391 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
CEACAM1-202ENST00000344391 ATP7BP35670 1465 aa22.35■■□□□ 1.17
CEACAM1-202ENST00000344391 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
CEACAM1-202ENST00000344391 CCER2I3L3R5 266 aa22.34■■□□□ 1.17
CEACAM1-202ENST00000344391 CABP1Q9NZU7 370 aa22.34■■□□□ 1.17
CEACAM1-202ENST00000344391 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.17
CEACAM1-202ENST00000344391 CCDC61Q9Y6R9 512 aa22.33■■□□□ 1.17
CEACAM1-202ENST00000344391 KTN1Q86UP2 1357 aaKnown RBP22.33■■□□□ 1.16
CEACAM1-202ENST00000344391 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.16
CEACAM1-202ENST00000344391 TOPAZ1Q8N9V7 1692 aa22.33■■□□□ 1.16
CEACAM1-202ENST00000344391 ADGRL3Q9HAR2 1447 aa22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 USP32Q8NFA0 1604 aa22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 FMN2Q9NZ56 1722 aa22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
CEACAM1-202ENST00000344391 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
CEACAM1-202ENST00000344391 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
CEACAM1-202ENST00000344391 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
CEACAM1-202ENST00000344391 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
CEACAM1-202ENST00000344391 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
CEACAM1-202ENST00000344391 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
CEACAM1-202ENST00000344391 RALBP1Q15311 655 aa22.3■■□□□ 1.16
CEACAM1-202ENST00000344391 PARD3Q8TEW0 1356 aa22.29■■□□□ 1.16
CEACAM1-202ENST00000344391 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
CEACAM1-202ENST00000344391 RGPD8O14715 1765 aaPredicted RBP22.28■■□□□ 1.16
CEACAM1-202ENST00000344391 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
CEACAM1-202ENST00000344391 ITSN1Q15811 1721 aa22.28■■□□□ 1.16
CEACAM1-202ENST00000344391 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
CEACAM1-202ENST00000344391 ANKARQ7Z5J8 1434 aa22.28■■□□□ 1.16
CEACAM1-202ENST00000344391 NUTM2FA1L443 756 aa22.27■■□□□ 1.16
CEACAM1-202ENST00000344391 CPSF1Q10570 1443 aaKnown RBP22.26■■□□□ 1.15
CEACAM1-202ENST00000344391 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
CEACAM1-202ENST00000344391 AKAP12Q02952 1782 aa22.26■■□□□ 1.15
CEACAM1-202ENST00000344391 PLEKHG3A1L390 1219 aa22.25■■□□□ 1.15
CEACAM1-202ENST00000344391 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
CEACAM1-202ENST00000344391 TMEM94Q12767 1356 aa22.24■■□□□ 1.15
CEACAM1-202ENST00000344391 MON2Q7Z3U7 1717 aa22.23■■□□□ 1.15
CEACAM1-202ENST00000344391 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
CEACAM1-202ENST00000344391 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
CEACAM1-202ENST00000344391 MYBBP1AQ9BQG0 1328 aaKnown RBP22.22■■□□□ 1.15
CEACAM1-202ENST00000344391 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
CEACAM1-202ENST00000344391 C19orf44Q9H6X5 657 aa22.21■■□□□ 1.15
CEACAM1-202ENST00000344391 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.15
CEACAM1-202ENST00000344391 NSD2O96028 1365 aa22.19■■□□□ 1.14
CEACAM1-202ENST00000344391 ACEP12821 1306 aa22.19■■□□□ 1.14
CEACAM1-202ENST00000344391 CCDC184Q52MB2 194 aa22.19■■□□□ 1.14
CEACAM1-202ENST00000344391 LRRC7Q96NW7 1537 aa22.19■■□□□ 1.14
CEACAM1-202ENST00000344391 EDC4Q6P2E9 1401 aaKnown RBP22.18■■□□□ 1.14
CEACAM1-202ENST00000344391 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
CEACAM1-202ENST00000344391 DCCP43146 1447 aa22.17■■□□□ 1.14
CEACAM1-202ENST00000344391 POLR3AO14802 1390 aaPredicted RBP22.17■■□□□ 1.14
CEACAM1-202ENST00000344391 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
CEACAM1-202ENST00000344391 PMFBP1Q8TBY8 1022 aa22.16■■□□□ 1.14
CEACAM1-202ENST00000344391 FYB1O15117 783 aa22.15■■□□□ 1.14
CEACAM1-202ENST00000344391 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
CEACAM1-202ENST00000344391 MRS2Q9HD23 443 aa22.15■■□□□ 1.14
CEACAM1-202ENST00000344391 NRKQ7Z2Y5 1582 aa22.14■■□□□ 1.14
CEACAM1-202ENST00000344391 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.13
CEACAM1-202ENST00000344391 USP6P35125 1406 aa22.13■■□□□ 1.13
CEACAM1-202ENST00000344391 PPP2R1AP30153 589 aa22.13■■□□□ 1.13
CEACAM1-202ENST00000344391 MORC1Q86VD1 984 aa22.13■■□□□ 1.13
CEACAM1-202ENST00000344391 NGDNQ8NEJ9 315 aaKnown RBP22.13■■□□□ 1.13
CEACAM1-202ENST00000344391 ATF3P18847 181 aa22.12■■□□□ 1.13
CEACAM1-202ENST00000344391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.12■■□□□ 1.13
CEACAM1-202ENST00000344391 PHF8Q9UPP1 1060 aa22.12■■□□□ 1.13
CEACAM1-202ENST00000344391 MSH6P52701 1360 aa22.12■■□□□ 1.13
CEACAM1-202ENST00000344391 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
CEACAM1-202ENST00000344391 SSH2Q76I76 1423 aa22.11■■□□□ 1.13
CEACAM1-202ENST00000344391 C1orf167Q5SNV9 1468 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms