RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
CT55-202ENST00000344129 AMOTL2Q9Y2J4 779 aa17.5■□□□□ 0.39
CT55-202ENST00000344129 MYOM1P52179 1685 aa17.48■□□□□ 0.39
CT55-202ENST00000344129 PANK3Q9H999 370 aa17.48■□□□□ 0.39
CT55-202ENST00000344129 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
CT55-202ENST00000344129 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
CT55-202ENST00000344129 SIRT1Q96EB6 747 aa17.46■□□□□ 0.39
CT55-202ENST00000344129 LMTK3Q96Q04 1460 aa17.46■□□□□ 0.38
CT55-202ENST00000344129 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
CT55-202ENST00000344129 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
CT55-202ENST00000344129 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
CT55-202ENST00000344129 XRN1Q8IZH2 1706 aaKnown RBP17.44■□□□□ 0.38
CT55-202ENST00000344129 PIK3R4Q99570 1358 aa17.43■□□□□ 0.38
CT55-202ENST00000344129 KCNA6P17658 529 aa17.43■□□□□ 0.38
CT55-202ENST00000344129 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.42■□□□□ 0.38
CT55-202ENST00000344129 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
CT55-202ENST00000344129 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
CT55-202ENST00000344129 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
CT55-202ENST00000344129 CHD2O14647 1828 aaKnown RBP17.41■□□□□ 0.38
CT55-202ENST00000344129 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
CT55-202ENST00000344129 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
CT55-202ENST00000344129 WASLO00401 505 aaPredicted RBP17.39■□□□□ 0.37
CT55-202ENST00000344129 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
CT55-202ENST00000344129 ATAD2Q6PL18 1390 aa17.37■□□□□ 0.37
CT55-202ENST00000344129 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
CT55-202ENST00000344129 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
CT55-202ENST00000344129 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
CT55-202ENST00000344129 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
CT55-202ENST00000344129 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
CT55-202ENST00000344129 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
CT55-202ENST00000344129 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
CT55-202ENST00000344129 NUTM2FA1L443 756 aa17.33■□□□□ 0.37
CT55-202ENST00000344129 CABP1Q9NZU7 370 aa17.33■□□□□ 0.37
CT55-202ENST00000344129 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.36
CT55-202ENST00000344129 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.36
CT55-202ENST00000344129 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
CT55-202ENST00000344129 YTHDC1Q96MU7 727 aaKnown RBP17.32■□□□□ 0.36
CT55-202ENST00000344129 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
CT55-202ENST00000344129 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
CT55-202ENST00000344129 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
CT55-202ENST00000344129 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
CT55-202ENST00000344129 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
CT55-202ENST00000344129 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
CT55-202ENST00000344129 PPIP5K1Q6PFW1 1433 aa17.3■□□□□ 0.36
CT55-202ENST00000344129 ATP7BP35670 1465 aa17.3■□□□□ 0.36
CT55-202ENST00000344129 CD163L1Q9NR16 1453 aa17.3■□□□□ 0.36
CT55-202ENST00000344129 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
CT55-202ENST00000344129 RALBP1Q15311 655 aa17.29■□□□□ 0.36
CT55-202ENST00000344129 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
CT55-202ENST00000344129 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
CT55-202ENST00000344129 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
CT55-202ENST00000344129 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
CT55-202ENST00000344129 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
CT55-202ENST00000344129 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.36
CT55-202ENST00000344129 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.35
CT55-202ENST00000344129 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
CT55-202ENST00000344129 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
CT55-202ENST00000344129 MRS2Q9HD23 443 aa17.25■□□□□ 0.35
CT55-202ENST00000344129 ADGRL3Q9HAR2 1447 aa17.25■□□□□ 0.35
CT55-202ENST00000344129 TOPAZ1Q8N9V7 1692 aa17.24■□□□□ 0.35
CT55-202ENST00000344129 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
CT55-202ENST00000344129 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
CT55-202ENST00000344129 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
CT55-202ENST00000344129 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
CT55-202ENST00000344129 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
CT55-202ENST00000344129 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
CT55-202ENST00000344129 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.35
CT55-202ENST00000344129 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
CT55-202ENST00000344129 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
CT55-202ENST00000344129 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
CT55-202ENST00000344129 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
CT55-202ENST00000344129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.2■□□□□ 0.34
CT55-202ENST00000344129 ACEP12821 1306 aa17.2■□□□□ 0.34
CT55-202ENST00000344129 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
CT55-202ENST00000344129 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
CT55-202ENST00000344129 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
CT55-202ENST00000344129 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
CT55-202ENST00000344129 ANKARQ7Z5J8 1434 aa17.19■□□□□ 0.34
CT55-202ENST00000344129 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
CT55-202ENST00000344129 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
CT55-202ENST00000344129 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
CT55-202ENST00000344129 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
CT55-202ENST00000344129 FYB1O15117 783 aa17.17■□□□□ 0.34
CT55-202ENST00000344129 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
CT55-202ENST00000344129 BRD4O60885 1362 aaPredicted RBP17.17■□□□□ 0.34
CT55-202ENST00000344129 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
CT55-202ENST00000344129 NGDNQ8NEJ9 315 aaKnown RBP17.16■□□□□ 0.34
CT55-202ENST00000344129 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
CT55-202ENST00000344129 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
CT55-202ENST00000344129 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
CT55-202ENST00000344129 NSD2O96028 1365 aa17.15■□□□□ 0.34
CT55-202ENST00000344129 KIF20BQ96Q89 1820 aa17.15■□□□□ 0.34
CT55-202ENST00000344129 NME9Q86XW9 330 aa17.14■□□□□ 0.33
CT55-202ENST00000344129 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
CT55-202ENST00000344129 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
CT55-202ENST00000344129 USP6P35125 1406 aa17.13■□□□□ 0.33
CT55-202ENST00000344129 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
CT55-202ENST00000344129 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
CT55-202ENST00000344129 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
CT55-202ENST00000344129 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms