RNA–Protein interactions for RNA: ENST00000343632.8

GGA1-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA1, Length 3,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-203ENST00000343632 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
GGA1-203ENST00000343632 USP32Q8NFA0 1604 aa23.56■■□□□ 1.36
GGA1-203ENST00000343632 PRAM1Q96QH2 718 aa23.55■■□□□ 1.36
GGA1-203ENST00000343632 ANKRD36BQ8N2N9 1353 aa23.53■■□□□ 1.36
GGA1-203ENST00000343632 B4GALNT3Q6L9W6 998 aa23.53■■□□□ 1.36
GGA1-203ENST00000343632 MORC1Q86VD1 984 aa23.53■■□□□ 1.36
GGA1-203ENST00000343632 POGKQ9P215 609 aa23.52■■□□□ 1.36
GGA1-203ENST00000343632 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
GGA1-203ENST00000343632 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
GGA1-203ENST00000343632 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
GGA1-203ENST00000343632 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
GGA1-203ENST00000343632 CGNL1Q0VF96 1302 aa23.51■■□□□ 1.35
GGA1-203ENST00000343632 SETD1AO15047 1707 aaKnown RBP23.49■■□□□ 1.35
GGA1-203ENST00000343632 POLR3AO14802 1390 aaPredicted RBP23.49■■□□□ 1.35
GGA1-203ENST00000343632 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
GGA1-203ENST00000343632 RRP1P56182 461 aaKnown RBP23.48■■□□□ 1.35
GGA1-203ENST00000343632 CCDC146Q8IYE0 955 aa23.48■■□□□ 1.35
GGA1-203ENST00000343632 NINLQ9Y2I6 1382 aa23.47■■□□□ 1.35
GGA1-203ENST00000343632 ZNF521Q96K83 1311 aa23.45■■□□□ 1.34
GGA1-203ENST00000343632 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
GGA1-203ENST00000343632 ATAD2Q6PL18 1390 aa23.45■■□□□ 1.34
GGA1-203ENST00000343632 TNRQ92752 1358 aa23.45■■□□□ 1.34
GGA1-203ENST00000343632 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
GGA1-203ENST00000343632 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
GGA1-203ENST00000343632 NSD2O96028 1365 aa23.43■■□□□ 1.34
GGA1-203ENST00000343632 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
GGA1-203ENST00000343632 SHPRHQ149N8 1683 aa23.42■■□□□ 1.34
GGA1-203ENST00000343632 APAF1O14727 1248 aa23.41■■□□□ 1.34
GGA1-203ENST00000343632 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
GGA1-203ENST00000343632 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
GGA1-203ENST00000343632 WAPLQ7Z5K2 1190 aa23.4■■□□□ 1.34
GGA1-203ENST00000343632 CD163L1Q9NR16 1453 aa23.39■■□□□ 1.34
GGA1-203ENST00000343632 GOLGA2Q08379 1002 aa23.39■■□□□ 1.34
GGA1-203ENST00000343632 MTHFSP49914 203 aa23.39■■□□□ 1.33
GGA1-203ENST00000343632 DUSP27Q5VZP5 1158 aa23.38■■□□□ 1.33
GGA1-203ENST00000343632 TERF2IPQ9NYB0 399 aa23.38■■□□□ 1.33
GGA1-203ENST00000343632 UBR1Q8IWV7 1749 aa23.37■■□□□ 1.33
GGA1-203ENST00000343632 METP08581 1390 aa23.37■■□□□ 1.33
GGA1-203ENST00000343632 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
GGA1-203ENST00000343632 HDGFP51858 240 aaKnown RBP23.35■■□□□ 1.33
GGA1-203ENST00000343632 TMEM2Q9UHN6 1383 aa23.34■■□□□ 1.33
GGA1-203ENST00000343632 SLFN5Q08AF3 891 aa23.34■■□□□ 1.33
GGA1-203ENST00000343632 EXOC6Q8TAG9 804 aa23.34■■□□□ 1.33
GGA1-203ENST00000343632 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
GGA1-203ENST00000343632 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
GGA1-203ENST00000343632 CABP1Q9NZU7 370 aa23.33■■□□□ 1.33
GGA1-203ENST00000343632 RBM19Q9Y4C8 960 aaKnown RBP23.33■■□□□ 1.32
GGA1-203ENST00000343632 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
GGA1-203ENST00000343632 PLIN1O60240 522 aa23.32■■□□□ 1.32
GGA1-203ENST00000343632 ANKRD26Q9UPS8 1709 aa23.31■■□□□ 1.32
GGA1-203ENST00000343632 FYB1O15117 783 aa23.31■■□□□ 1.32
GGA1-203ENST00000343632 NLRP1Q9C000 1473 aa23.31■■□□□ 1.32
GGA1-203ENST00000343632 CEBPAP49715 358 aaPredicted RBP23.3■■□□□ 1.32
GGA1-203ENST00000343632 NGEFQ8N5V2 710 aa23.3■■□□□ 1.32
GGA1-203ENST00000343632 TRMT2AQ8IZ69 625 aaKnown RBP23.3■■□□□ 1.32
GGA1-203ENST00000343632 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
GGA1-203ENST00000343632 TXNDC2Q86VQ3 553 aa23.3■■□□□ 1.32
GGA1-203ENST00000343632 KNDC1Q76NI1 1749 aa23.29■■□□□ 1.32
GGA1-203ENST00000343632 MED14O60244 1454 aa23.29■■□□□ 1.32
GGA1-203ENST00000343632 RUNDC1Q96C34 613 aa23.28■■□□□ 1.32
GGA1-203ENST00000343632 TECPR2O15040 1411 aa23.27■■□□□ 1.32
GGA1-203ENST00000343632 DMRT2Q9Y5R5 561 aa23.27■■□□□ 1.32
GGA1-203ENST00000343632 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 ATP7BP35670 1465 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 KIF20BQ96Q89 1820 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
GGA1-203ENST00000343632 C3P01024 1663 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 CPS1P31327 1500 aa23.25■■□□□ 1.31
GGA1-203ENST00000343632 E9PSI1 815 aa23.24■■□□□ 1.31
GGA1-203ENST00000343632 ADAMTS13Q76LX8 1427 aa23.24■■□□□ 1.31
GGA1-203ENST00000343632 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
GGA1-203ENST00000343632 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
GGA1-203ENST00000343632 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
GGA1-203ENST00000343632 LTKP29376 864 aa23.23■■□□□ 1.31
GGA1-203ENST00000343632 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
GGA1-203ENST00000343632 NKTRP30414 1462 aaKnown RBP23.23■■□□□ 1.31
GGA1-203ENST00000343632 RRP7AQ9Y3A4 280 aaKnown RBP23.22■■□□□ 1.31
GGA1-203ENST00000343632 FER1L4A9Z1Z3 1794 aa23.22■■□□□ 1.31
GGA1-203ENST00000343632 U2AF1L5P0DN76 240 aaPredicted RBP23.22■■□□□ 1.31
GGA1-203ENST00000343632 U2AF1Q01081 240 aaKnown RBP eCLIP23.22■■□□□ 1.31
GGA1-203ENST00000343632 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
GGA1-203ENST00000343632 PLEKHG1Q9ULL1 1385 aa23.21■■□□□ 1.31
GGA1-203ENST00000343632 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
GGA1-203ENST00000343632 CRBNQ96SW2 442 aa23.21■■□□□ 1.31
GGA1-203ENST00000343632 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
GGA1-203ENST00000343632 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
GGA1-203ENST00000343632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
GGA1-203ENST00000343632 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
GGA1-203ENST00000343632 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
GGA1-203ENST00000343632 CPSF1Q10570 1443 aaKnown RBP23.18■■□□□ 1.3
GGA1-203ENST00000343632 NUDT16Q96DE0 195 aaKnown RBP23.17■■□□□ 1.3
GGA1-203ENST00000343632 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
GGA1-203ENST00000343632 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
GGA1-203ENST00000343632 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
GGA1-203ENST00000343632 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
GGA1-203ENST00000343632 EDC4Q6P2E9 1401 aaKnown RBP23.14■■□□□ 1.29
GGA1-203ENST00000343632 EID1Q9Y6B2 187 aa23.14■■□□□ 1.29
GGA1-203ENST00000343632 SLIT1O75093 1534 aa23.14■■□□□ 1.29
GGA1-203ENST00000343632 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms