RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 NEXMIFQ5QGS0 1516 aa27.05■■□□□ 1.92
CDHR4-201ENST00000343366 PPLO60437 1756 aa27.04■■□□□ 1.92
CDHR4-201ENST00000343366 RGL3Q3MIN7 710 aa27.03■■□□□ 1.92
CDHR4-201ENST00000343366 DDX17Q92841 729 aaKnown RBP27.03■■□□□ 1.92
CDHR4-201ENST00000343366 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
CDHR4-201ENST00000343366 IFT172Q9UG01 1749 aa27.01■■□□□ 1.91
CDHR4-201ENST00000343366 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
CDHR4-201ENST00000343366 C8orf37Q96NL8 207 aa27■■□□□ 1.91
CDHR4-201ENST00000343366 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
CDHR4-201ENST00000343366 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
CDHR4-201ENST00000343366 NEUROD1Q13562 356 aa26.98■■□□□ 1.91
CDHR4-201ENST00000343366 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
CDHR4-201ENST00000343366 COL22A1Q8NFW1 1626 aaPredicted RBP26.98■■□□□ 1.91
CDHR4-201ENST00000343366 MYOM2P54296 1465 aa26.96■■□□□ 1.91
CDHR4-201ENST00000343366 PTCH1Q13635 1447 aa26.96■■□□□ 1.91
CDHR4-201ENST00000343366 SOS2Q07890 1332 aaPredicted RBP26.95■■□□□ 1.91
CDHR4-201ENST00000343366 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
CDHR4-201ENST00000343366 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
CDHR4-201ENST00000343366 ATAD2Q6PL18 1390 aa26.9■■□□□ 1.9
CDHR4-201ENST00000343366 ATRNO75882 1429 aa26.9■■□□□ 1.9
CDHR4-201ENST00000343366 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.9
CDHR4-201ENST00000343366 MARF1Q9Y4F3 1742 aaKnown RBP26.88■■□□□ 1.89
CDHR4-201ENST00000343366 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 ADAMTS2O95450 1211 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 NGLY1Q96IV0 654 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
CDHR4-201ENST00000343366 ORAI2Q96SN7 254 aa26.85■■□□□ 1.89
CDHR4-201ENST00000343366 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
CDHR4-201ENST00000343366 USP21Q9UK80 565 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 TRPC5Q9UL62 973 aaPredicted RBP26.83■■□□□ 1.89
CDHR4-201ENST00000343366 KDM2AQ9Y2K7 1162 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 ADGRF5Q8IZF2 1346 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
CDHR4-201ENST00000343366 PXDNQ92626 1479 aa26.8■■□□□ 1.88
CDHR4-201ENST00000343366 CDC42BPGQ6DT37 1551 aa26.8■■□□□ 1.88
CDHR4-201ENST00000343366 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
CDHR4-201ENST00000343366 KIAA1210Q9ULL0 1709 aa26.78■■□□□ 1.88
CDHR4-201ENST00000343366 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
CDHR4-201ENST00000343366 GLI3P10071 1580 aa26.71■■□□□ 1.87
CDHR4-201ENST00000343366 CCDC125Q86Z20 511 aa26.7■■□□□ 1.86
CDHR4-201ENST00000343366 ZRANB1Q9UGI0 708 aa26.7■■□□□ 1.86
CDHR4-201ENST00000343366 NPHP3Q7Z494 1330 aa26.68■■□□□ 1.86
CDHR4-201ENST00000343366 CFAP70Q5T0N1 1121 aa26.67■■□□□ 1.86
CDHR4-201ENST00000343366 BRWD3Q6RI45 1802 aa26.67■■□□□ 1.86
CDHR4-201ENST00000343366 SLIT2O94813 1529 aa26.66■■□□□ 1.86
CDHR4-201ENST00000343366 TECPR2O15040 1411 aa26.65■■□□□ 1.86
CDHR4-201ENST00000343366 GJD4Q96KN9 370 aaPredicted RBP26.65■■□□□ 1.86
CDHR4-201ENST00000343366 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
CDHR4-201ENST00000343366 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
CDHR4-201ENST00000343366 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
CDHR4-201ENST00000343366 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
CDHR4-201ENST00000343366 LRPPRCP42704 1394 aaKnown RBP26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ADGRB1O14514 1584 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 USP32Q8NFA0 1604 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
CDHR4-201ENST00000343366 BLMP54132 1417 aaPredicted RBP26.59■■□□□ 1.85
CDHR4-201ENST00000343366 YTHDC2Q9H6S0 1430 aaKnown RBP26.59■■□□□ 1.85
CDHR4-201ENST00000343366 KIF1AQ12756 1690 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 FOXO3O43524 673 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 NBPF8Q3BBV2 869 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 SIRT1Q96EB6 747 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 ROCK2O75116 1388 aaKnown RBP26.58■■□□□ 1.84
CDHR4-201ENST00000343366 LRP5O75197 1615 aa26.57■■□□□ 1.84
CDHR4-201ENST00000343366 XPCQ01831 940 aaPredicted RBP26.56■■□□□ 1.84
CDHR4-201ENST00000343366 TMEM132EQ6IEE7 984 aa26.56■■□□□ 1.84
CDHR4-201ENST00000343366 GPRASP1Q5JY77 1395 aa26.55■■□□□ 1.84
CDHR4-201ENST00000343366 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
CDHR4-201ENST00000343366 ZEB1P37275 1124 aaPredicted RBP26.54■■□□□ 1.84
CDHR4-201ENST00000343366 UNC5CLQ8IV45 518 aa26.54■■□□□ 1.84
CDHR4-201ENST00000343366 SPATA31A3Q5VYP0 1347 aa26.54■■□□□ 1.84
CDHR4-201ENST00000343366 ABCA3Q99758 1704 aa26.53■■□□□ 1.84
CDHR4-201ENST00000343366 NWD2Q9ULI1 1742 aa26.53■■□□□ 1.84
CDHR4-201ENST00000343366 PLCH1Q4KWH8 1693 aa26.52■■□□□ 1.84
CDHR4-201ENST00000343366 NBPF1Q3BBV0 1214 aa26.51■■□□□ 1.83
CDHR4-201ENST00000343366 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
CDHR4-201ENST00000343366 PLEKHH1Q9ULM0 1364 aa26.5■■□□□ 1.83
CDHR4-201ENST00000343366 EIF3AQ14152 1382 aaKnown RBP26.49■■□□□ 1.83
CDHR4-201ENST00000343366 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
CDHR4-201ENST00000343366 STK26Q9P289 416 aa26.49■■□□□ 1.83
CDHR4-201ENST00000343366 CARD11Q9BXL7 1154 aa26.48■■□□□ 1.83
CDHR4-201ENST00000343366 ONECUT3O60422 494 aaPredicted RBP26.47■■□□□ 1.83
CDHR4-201ENST00000343366 DEFB132Q7Z7B7 95 aa26.47■■□□□ 1.83
CDHR4-201ENST00000343366 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
CDHR4-201ENST00000343366 ARHGEF28Q8N1W1 1705 aaKnown RBP26.45■■□□□ 1.82
CDHR4-201ENST00000343366 TNS3Q68CZ2 1445 aa26.44■■□□□ 1.82
CDHR4-201ENST00000343366 NUTM2FA1L443 756 aa26.43■■□□□ 1.82
CDHR4-201ENST00000343366 POGKQ9P215 609 aa26.43■■□□□ 1.82
CDHR4-201ENST00000343366 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
CDHR4-201ENST00000343366 VPS72Q15906 364 aa26.42■■□□□ 1.82
CDHR4-201ENST00000343366 SLC24A1O60721 1099 aa26.41■■□□□ 1.82
CDHR4-201ENST00000343366 SEPT12Q8IYM1 358 aa26.41■■□□□ 1.82
CDHR4-201ENST00000343366 PRAM1Q96QH2 718 aa26.39■■□□□ 1.82
CDHR4-201ENST00000343366 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
CDHR4-201ENST00000343366 SBNO1A3KN83 1393 aa26.37■■□□□ 1.81
CDHR4-201ENST00000343366 CENPJQ9HC77 1338 aaPredicted RBP26.37■■□□□ 1.81
CDHR4-201ENST00000343366 TRPM3Q9HCF6 1732 aaPredicted RBP26.35■■□□□ 1.81
CDHR4-201ENST00000343366 CABLES1Q8TDN4 633 aa26.33■■□□□ 1.81
CDHR4-201ENST00000343366 KRT27Q7Z3Y8 459 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms