RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 NEXMIFQ5QGS0 1516 aa27.05■■□□□ 1.92
CDHR4-201ENST00000343366 PPLO60437 1756 aa27.04■■□□□ 1.92
CDHR4-201ENST00000343366 RGL3Q3MIN7 710 aa27.03■■□□□ 1.92
CDHR4-201ENST00000343366 DDX17Q92841 729 aaKnown RBP27.03■■□□□ 1.92
CDHR4-201ENST00000343366 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
CDHR4-201ENST00000343366 IFT172Q9UG01 1749 aa27.01■■□□□ 1.91
CDHR4-201ENST00000343366 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
CDHR4-201ENST00000343366 C8orf37Q96NL8 207 aa27■■□□□ 1.91
CDHR4-201ENST00000343366 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
CDHR4-201ENST00000343366 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
CDHR4-201ENST00000343366 NEUROD1Q13562 356 aa26.98■■□□□ 1.91
CDHR4-201ENST00000343366 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
CDHR4-201ENST00000343366 COL22A1Q8NFW1 1626 aaPredicted RBP26.98■■□□□ 1.91
CDHR4-201ENST00000343366 MYOM2P54296 1465 aa26.96■■□□□ 1.91
CDHR4-201ENST00000343366 PTCH1Q13635 1447 aa26.96■■□□□ 1.91
CDHR4-201ENST00000343366 SOS2Q07890 1332 aaPredicted RBP26.95■■□□□ 1.91
CDHR4-201ENST00000343366 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
CDHR4-201ENST00000343366 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
CDHR4-201ENST00000343366 ATAD2Q6PL18 1390 aa26.9■■□□□ 1.9
CDHR4-201ENST00000343366 ATRNO75882 1429 aa26.9■■□□□ 1.9
CDHR4-201ENST00000343366 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.9
CDHR4-201ENST00000343366 MARF1Q9Y4F3 1742 aaKnown RBP26.88■■□□□ 1.89
CDHR4-201ENST00000343366 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 ROBO2Q9HCK4 1378 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 ADAMTS2O95450 1211 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 NGLY1Q96IV0 654 aa26.87■■□□□ 1.89
CDHR4-201ENST00000343366 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
CDHR4-201ENST00000343366 ORAI2Q96SN7 254 aa26.85■■□□□ 1.89
CDHR4-201ENST00000343366 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
CDHR4-201ENST00000343366 USP21Q9UK80 565 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 TRPC5Q9UL62 973 aaPredicted RBP26.83■■□□□ 1.89
CDHR4-201ENST00000343366 KDM2AQ9Y2K7 1162 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 ADGRF5Q8IZF2 1346 aa26.83■■□□□ 1.89
CDHR4-201ENST00000343366 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
CDHR4-201ENST00000343366 PXDNQ92626 1479 aa26.8■■□□□ 1.88
CDHR4-201ENST00000343366 CDC42BPGQ6DT37 1551 aa26.8■■□□□ 1.88
CDHR4-201ENST00000343366 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
CDHR4-201ENST00000343366 KIAA1210Q9ULL0 1709 aa26.78■■□□□ 1.88
CDHR4-201ENST00000343366 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
CDHR4-201ENST00000343366 GLI3P10071 1580 aa26.71■■□□□ 1.87
CDHR4-201ENST00000343366 CCDC125Q86Z20 511 aa26.7■■□□□ 1.86
CDHR4-201ENST00000343366 ZRANB1Q9UGI0 708 aa26.7■■□□□ 1.86
CDHR4-201ENST00000343366 NPHP3Q7Z494 1330 aa26.68■■□□□ 1.86
CDHR4-201ENST00000343366 CFAP70Q5T0N1 1121 aa26.67■■□□□ 1.86
CDHR4-201ENST00000343366 BRWD3Q6RI45 1802 aa26.67■■□□□ 1.86
CDHR4-201ENST00000343366 SLIT2O94813 1529 aa26.66■■□□□ 1.86
CDHR4-201ENST00000343366 TECPR2O15040 1411 aa26.65■■□□□ 1.86
CDHR4-201ENST00000343366 GJD4Q96KN9 370 aaPredicted RBP26.65■■□□□ 1.86
CDHR4-201ENST00000343366 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
CDHR4-201ENST00000343366 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
CDHR4-201ENST00000343366 RALGAPBQ86X10 1494 aa26.62■■□□□ 1.85
CDHR4-201ENST00000343366 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
CDHR4-201ENST00000343366 LRPPRCP42704 1394 aaKnown RBP26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ADGRB1O14514 1584 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ESCO1Q5FWF5 840 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 USP32Q8NFA0 1604 aa26.6■■□□□ 1.85
CDHR4-201ENST00000343366 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
CDHR4-201ENST00000343366 BLMP54132 1417 aaPredicted RBP26.59■■□□□ 1.85
CDHR4-201ENST00000343366 YTHDC2Q9H6S0 1430 aaKnown RBP26.59■■□□□ 1.85
CDHR4-201ENST00000343366 KIF1AQ12756 1690 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 FOXO3O43524 673 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 NBPF8Q3BBV2 869 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 SIRT1Q96EB6 747 aa26.58■■□□□ 1.85
CDHR4-201ENST00000343366 ROCK2O75116 1388 aaKnown RBP26.58■■□□□ 1.84
CDHR4-201ENST00000343366 LRP5O75197 1615 aa26.57■■□□□ 1.84
CDHR4-201ENST00000343366 XPCQ01831 940 aaPredicted RBP26.56■■□□□ 1.84
CDHR4-201ENST00000343366 TMEM132EQ6IEE7 984 aa26.56■■□□□ 1.84
CDHR4-201ENST00000343366 GPRASP1Q5JY77 1395 aa26.55■■□□□ 1.84
CDHR4-201ENST00000343366 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
CDHR4-201ENST00000343366 ZEB1P37275 1124 aaPredicted RBP26.54■■□□□ 1.84
CDHR4-201ENST00000343366 UNC5CLQ8IV45 518 aa26.54■■□□□ 1.84
CDHR4-201ENST00000343366 SPATA31A3Q5VYP0 1347 aa26.54■■□□□ 1.84
CDHR4-201ENST00000343366 ABCA3Q99758 1704 aa26.53■■□□□ 1.84
CDHR4-201ENST00000343366 NWD2Q9ULI1 1742 aa26.53■■□□□ 1.84
CDHR4-201ENST00000343366 PLCH1Q4KWH8 1693 aa26.52■■□□□ 1.84
CDHR4-201ENST00000343366 NBPF1Q3BBV0 1214 aa26.51■■□□□ 1.83
CDHR4-201ENST00000343366 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
CDHR4-201ENST00000343366 PLEKHH1Q9ULM0 1364 aa26.5■■□□□ 1.83
CDHR4-201ENST00000343366 EIF3AQ14152 1382 aaKnown RBP26.49■■□□□ 1.83
CDHR4-201ENST00000343366 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
CDHR4-201ENST00000343366 STK26Q9P289 416 aa26.49■■□□□ 1.83
CDHR4-201ENST00000343366 CARD11Q9BXL7 1154 aa26.48■■□□□ 1.83
CDHR4-201ENST00000343366 ONECUT3O60422 494 aaPredicted RBP26.47■■□□□ 1.83
CDHR4-201ENST00000343366 DEFB132Q7Z7B7 95 aa26.47■■□□□ 1.83
CDHR4-201ENST00000343366 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
CDHR4-201ENST00000343366 ARHGEF28Q8N1W1 1705 aaKnown RBP26.45■■□□□ 1.82
CDHR4-201ENST00000343366 TNS3Q68CZ2 1445 aa26.44■■□□□ 1.82
CDHR4-201ENST00000343366 NUTM2FA1L443 756 aa26.43■■□□□ 1.82
CDHR4-201ENST00000343366 POGKQ9P215 609 aa26.43■■□□□ 1.82
CDHR4-201ENST00000343366 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
CDHR4-201ENST00000343366 VPS72Q15906 364 aa26.42■■□□□ 1.82
CDHR4-201ENST00000343366 SLC24A1O60721 1099 aa26.41■■□□□ 1.82
CDHR4-201ENST00000343366 SEPT12Q8IYM1 358 aa26.41■■□□□ 1.82
CDHR4-201ENST00000343366 PRAM1Q96QH2 718 aa26.39■■□□□ 1.82
CDHR4-201ENST00000343366 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
CDHR4-201ENST00000343366 SBNO1A3KN83 1393 aa26.37■■□□□ 1.81
CDHR4-201ENST00000343366 CENPJQ9HC77 1338 aaPredicted RBP26.37■■□□□ 1.81
CDHR4-201ENST00000343366 TRPM3Q9HCF6 1732 aaPredicted RBP26.35■■□□□ 1.81
CDHR4-201ENST00000343366 CABLES1Q8TDN4 633 aa26.33■■□□□ 1.81
CDHR4-201ENST00000343366 KRT27Q7Z3Y8 459 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms