RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 POLR3AO14802 1390 aaPredicted RBP31.04■■■□□ 2.56
NELFB-201ENST00000343053 MTHFSP49914 203 aa31.04■■■□□ 2.56
NELFB-201ENST00000343053 CLUAP1Q96AJ1 413 aa31.03■■■□□ 2.56
NELFB-201ENST00000343053 SHPRHQ149N8 1683 aa31.03■■■□□ 2.56
NELFB-201ENST00000343053 QRICH2Q9H0J4 1663 aa31.03■■■□□ 2.56
NELFB-201ENST00000343053 NPATQ14207 1427 aa31.02■■■□□ 2.56
NELFB-201ENST00000343053 ADGRB3O60242 1522 aa31.01■■■□□ 2.55
NELFB-201ENST00000343053 NRXN1Q9ULB1 1477 aa31■■■□□ 2.55
NELFB-201ENST00000343053 SLC24A1O60721 1099 aa31■■■□□ 2.55
NELFB-201ENST00000343053 MYO3AQ8NEV4 1616 aa31■■■□□ 2.55
NELFB-201ENST00000343053 CGNL1Q0VF96 1302 aa30.99■■■□□ 2.55
NELFB-201ENST00000343053 SEC24BO95487 1268 aa30.99■■■□□ 2.55
NELFB-201ENST00000343053 RLBP1P12271 317 aa30.99■■■□□ 2.55
NELFB-201ENST00000343053 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
NELFB-201ENST00000343053 RUNDC1Q96C34 613 aa30.99■■■□□ 2.55
NELFB-201ENST00000343053 C14orf93Q9H972 538 aaKnown RBP30.97■■■□□ 2.55
NELFB-201ENST00000343053 SBNO2Q9Y2G9 1366 aa30.96■■■□□ 2.55
NELFB-201ENST00000343053 PDE3AQ14432 1141 aa30.96■■■□□ 2.55
NELFB-201ENST00000343053 RARSP54136 660 aaKnown RBP30.96■■■□□ 2.55
NELFB-201ENST00000343053 CABP2Q9NPB3 220 aa30.95■■■□□ 2.54
NELFB-201ENST00000343053 ZNF518AQ6AHZ1 1483 aa30.95■■■□□ 2.54
NELFB-201ENST00000343053 PPLO60437 1756 aa30.93■■■□□ 2.54
NELFB-201ENST00000343053 U2AF1L5P0DN76 240 aaPredicted RBP30.92■■■□□ 2.54
NELFB-201ENST00000343053 U2AF1Q01081 240 aaKnown RBP eCLIP30.92■■■□□ 2.54
NELFB-201ENST00000343053 ZC3H13Q5T200 1668 aaKnown RBP30.92■■■□□ 2.54
NELFB-201ENST00000343053 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
NELFB-201ENST00000343053 FRAT2O75474 233 aaPredicted RBP30.91■■■□□ 2.54
NELFB-201ENST00000343053 STK26Q9P289 416 aa30.91■■■□□ 2.54
NELFB-201ENST00000343053 PCDHB15Q9Y5E8 787 aa30.91■■■□□ 2.54
NELFB-201ENST00000343053 SETBP1Q9Y6X0 1596 aa30.89■■■□□ 2.54
NELFB-201ENST00000343053 USP19O94966 1318 aa30.88■■■□□ 2.53
NELFB-201ENST00000343053 IQSEC2Q5JU85 1478 aa30.88■■■□□ 2.53
NELFB-201ENST00000343053 NGEFQ8N5V2 710 aa30.88■■■□□ 2.53
NELFB-201ENST00000343053 FRMPD1Q5SYB0 1578 aa30.87■■■□□ 2.53
NELFB-201ENST00000343053 CFAP53Q96M91 514 aa30.87■■■□□ 2.53
NELFB-201ENST00000343053 TSR2Q969E8 191 aaKnown RBP30.87■■■□□ 2.53
NELFB-201ENST00000343053 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
NELFB-201ENST00000343053 RAPGEF3O95398 923 aa30.86■■■□□ 2.53
NELFB-201ENST00000343053 GSE1Q14687 1217 aa30.86■■■□□ 2.53
NELFB-201ENST00000343053 U2SURPO15042 1029 aaKnown RBP30.84■■■□□ 2.53
NELFB-201ENST00000343053 NPM1P06748 294 aaKnown RBP eCLIP30.83■■■□□ 2.53
NELFB-201ENST00000343053 BRPF3Q9ULD4 1205 aa30.83■■■□□ 2.53
NELFB-201ENST00000343053 VIRMAQ69YN4 1812 aaKnown RBP30.83■■■□□ 2.53
NELFB-201ENST00000343053 GLI2P10070 1586 aa30.83■■■□□ 2.53
NELFB-201ENST00000343053 GGNBP2Q9H3C7 697 aa30.82■■■□□ 2.52
NELFB-201ENST00000343053 CD109Q6YHK3 1445 aa30.82■■■□□ 2.52
NELFB-201ENST00000343053 EVC2Q86UK5 1308 aa30.81■■■□□ 2.52
NELFB-201ENST00000343053 TULP4Q9NRJ4 1543 aa30.81■■■□□ 2.52
NELFB-201ENST00000343053 POGZQ7Z3K3 1410 aa30.81■■■□□ 2.52
NELFB-201ENST00000343053 NINLQ9Y2I6 1382 aa30.81■■■□□ 2.52
NELFB-201ENST00000343053 MAPK8IP3Q9UPT6 1336 aa30.8■■■□□ 2.52
NELFB-201ENST00000343053 SLKQ9H2G2 1235 aaPredicted RBP30.8■■■□□ 2.52
NELFB-201ENST00000343053 PHF23Q9BUL5 403 aaPredicted RBP30.8■■■□□ 2.52
NELFB-201ENST00000343053 SIGLEC1Q9BZZ2 1709 aa30.79■■■□□ 2.52
NELFB-201ENST00000343053 PDZRN3Q9UPQ7 1066 aa30.79■■■□□ 2.52
NELFB-201ENST00000343053 SRPK2P78362 688 aaKnown RBP30.79■■■□□ 2.52
NELFB-201ENST00000343053 WDR63Q8IWG1 891 aa30.78■■■□□ 2.52
NELFB-201ENST00000343053 ABCC3O15438 1527 aa30.77■■■□□ 2.52
NELFB-201ENST00000343053 HECW2Q9P2P5 1572 aa30.75■■■□□ 2.51
NELFB-201ENST00000343053 ANKRD36BQ8N2N9 1353 aa30.75■■■□□ 2.51
NELFB-201ENST00000343053 PMFBP1Q8TBY8 1022 aa30.75■■■□□ 2.51
NELFB-201ENST00000343053 ARHGEF28Q8N1W1 1705 aaKnown RBP30.74■■■□□ 2.51
NELFB-201ENST00000343053 MINK1Q8N4C8 1332 aaPredicted RBP30.74■■■□□ 2.51
NELFB-201ENST00000343053 FTSJ3Q8IY81 847 aaKnown RBP30.73■■■□□ 2.51
NELFB-201ENST00000343053 MYH16Q9H6N6 1097 aa30.73■■■□□ 2.51
NELFB-201ENST00000343053 CAMSAP1Q5T5Y3 1602 aa30.72■■■□□ 2.51
NELFB-201ENST00000343053 A0A1W2PP64 1363 aa30.72■■■□□ 2.51
NELFB-201ENST00000343053 VGFO15240 615 aaPredicted RBP30.71■■■□□ 2.51
NELFB-201ENST00000343053 IDI1Q13907 227 aa30.71■■■□□ 2.51
NELFB-201ENST00000343053 EXOSC9Q06265 439 aaKnown RBP30.7■■■□□ 2.51
NELFB-201ENST00000343053 SMC4Q9NTJ3 1288 aa30.7■■■□□ 2.51
NELFB-201ENST00000343053 RPGRIP1LQ68CZ1 1315 aa30.7■■■□□ 2.5
NELFB-201ENST00000343053 USP32Q8NFA0 1604 aa30.68■■■□□ 2.5
NELFB-201ENST00000343053 NLRP1Q9C000 1473 aa30.68■■■□□ 2.5
NELFB-201ENST00000343053 MVPQ14764 893 aaKnown RBP30.68■■■□□ 2.5
NELFB-201ENST00000343053 SPRYD3Q8NCJ5 442 aa30.68■■■□□ 2.5
NELFB-201ENST00000343053 MLH3Q9UHC1 1453 aa30.67■■■□□ 2.5
NELFB-201ENST00000343053 NEXMIFQ5QGS0 1516 aa30.67■■■□□ 2.5
NELFB-201ENST00000343053 CCDC27Q2M243 656 aa30.67■■■□□ 2.5
NELFB-201ENST00000343053 ZKSCAN2Q63HK3 967 aa30.66■■■□□ 2.5
NELFB-201ENST00000343053 DZIP1LQ8IYY4 767 aaKnown RBP30.65■■■□□ 2.5
NELFB-201ENST00000343053 RWDD1Q9H446 243 aaPredicted RBP30.65■■■□□ 2.5
NELFB-201ENST00000343053 FBLN1P23142 703 aa30.64■■■□□ 2.5
NELFB-201ENST00000343053 ITPRIPQ8IWB1 547 aa30.64■■■□□ 2.5
NELFB-201ENST00000343053 TMPOP42166 694 aaKnown RBP30.62■■■□□ 2.49
NELFB-201ENST00000343053 PRAM1Q96QH2 718 aa30.62■■■□□ 2.49
NELFB-201ENST00000343053 SSH1Q8WYL5 1049 aa30.62■■■□□ 2.49
NELFB-201ENST00000343053 TRIM27P14373 513 aa30.61■■■□□ 2.49
NELFB-201ENST00000343053 ANO8Q9HCE9 1232 aaPredicted RBP30.61■■■□□ 2.49
NELFB-201ENST00000343053 TRIM35Q9UPQ4 493 aa30.61■■■□□ 2.49
NELFB-201ENST00000343053 MYO5BQ9ULV0 1848 aa30.61■■■□□ 2.49
NELFB-201ENST00000343053 BECN1Q14457 450 aa30.6■■■□□ 2.49
NELFB-201ENST00000343053 UPF2Q9HAU5 1272 aaKnown RBP30.6■■■□□ 2.49
NELFB-201ENST00000343053 POGKQ9P215 609 aa30.6■■■□□ 2.49
NELFB-201ENST00000343053 PLEKHF1Q96S99 279 aa30.59■■■□□ 2.49
NELFB-201ENST00000343053 NSD2O96028 1365 aa30.58■■■□□ 2.49
NELFB-201ENST00000343053 ADGRB2O60241 1585 aa30.58■■■□□ 2.49
NELFB-201ENST00000343053 FYB1O15117 783 aa30.58■■■□□ 2.49
NELFB-201ENST00000343053 ABCC11Q96J66 1382 aa30.58■■■□□ 2.49
NELFB-201ENST00000343053 RIPK4P57078 832 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms