RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 TOM1O60784 492 aa31.28■■■□□ 2.6
RBM38-201ENST00000342690 DCCP43146 1447 aa31.28■■■□□ 2.6
RBM38-201ENST00000342690 POGKQ9P215 609 aa31.25■■■□□ 2.59
RBM38-201ENST00000342690 SAFB2Q14151 953 aaKnown RBP eCLIP31.24■■■□□ 2.59
RBM38-201ENST00000342690 CDC42BPGQ6DT37 1551 aa31.23■■■□□ 2.59
RBM38-201ENST00000342690 ATF3P18847 181 aa31.22■■■□□ 2.59
RBM38-201ENST00000342690 CADPS2Q86UW7 1296 aa31.21■■■□□ 2.59
RBM38-201ENST00000342690 ADGRB2O60241 1585 aa31.19■■■□□ 2.58
RBM38-201ENST00000342690 CARD11Q9BXL7 1154 aa31.19■■■□□ 2.58
RBM38-201ENST00000342690 PIP4K2BP78356 416 aa31.18■■■□□ 2.58
RBM38-201ENST00000342690 MST1RQ04912 1400 aa31.17■■■□□ 2.58
RBM38-201ENST00000342690 ZEB1P37275 1124 aaPredicted RBP31.16■■■□□ 2.58
RBM38-201ENST00000342690 SCAF1Q9H7N4 1312 aaKnown RBP31.16■■■□□ 2.58
RBM38-201ENST00000342690 SLAIN2Q9P270 581 aa31.15■■■□□ 2.58
RBM38-201ENST00000342690 QRICH2Q9H0J4 1663 aa31.15■■■□□ 2.58
RBM38-201ENST00000342690 FMN2Q9NZ56 1722 aa31.14■■■□□ 2.58
RBM38-201ENST00000342690 MINK1Q8N4C8 1332 aaPredicted RBP31.14■■■□□ 2.58
RBM38-201ENST00000342690 CENPJQ9HC77 1338 aaPredicted RBP31.13■■■□□ 2.57
RBM38-201ENST00000342690 ROBO1Q9Y6N7 1651 aa31.13■■■□□ 2.57
RBM38-201ENST00000342690 EIF3AQ14152 1382 aaKnown RBP31.12■■■□□ 2.57
RBM38-201ENST00000342690 HIRIP3Q9BW71 556 aaPredicted RBP31.11■■■□□ 2.57
RBM38-201ENST00000342690 ILDR1Q86SU0 546 aaPredicted RBP31.1■■■□□ 2.57
RBM38-201ENST00000342690 C1orf167Q5SNV9 1468 aa31.09■■■□□ 2.57
RBM38-201ENST00000342690 NUTM2FA1L443 756 aa31.04■■■□□ 2.56
RBM38-201ENST00000342690 USP32Q8NFA0 1604 aa31.02■■■□□ 2.56
RBM38-201ENST00000342690 WASLO00401 505 aaPredicted RBP31.02■■■□□ 2.56
RBM38-201ENST00000342690 BRINP3Q76B58 766 aa31.02■■■□□ 2.56
RBM38-201ENST00000342690 TULP4Q9NRJ4 1543 aa31.01■■■□□ 2.55
RBM38-201ENST00000342690 USP47Q96K76 1375 aa31.01■■■□□ 2.55
RBM38-201ENST00000342690 RGPD8O14715 1765 aaPredicted RBP31■■■□□ 2.55
RBM38-201ENST00000342690 ANKARQ7Z5J8 1434 aa30.98■■■□□ 2.55
RBM38-201ENST00000342690 ORAI2Q96SN7 254 aa30.98■■■□□ 2.55
RBM38-201ENST00000342690 SBNO2Q9Y2G9 1366 aa30.97■■■□□ 2.55
RBM38-201ENST00000342690 CDK19Q9BWU1 502 aa30.95■■■□□ 2.55
RBM38-201ENST00000342690 PRR36Q9H6K5 1346 aa30.95■■■□□ 2.54
RBM38-201ENST00000342690 NHSL1Q5SYE7 1610 aa30.95■■■□□ 2.54
RBM38-201ENST00000342690 AHDC1Q5TGY3 1603 aaPredicted RBP30.95■■■□□ 2.54
RBM38-201ENST00000342690 ST20-MTHFSA0A0A6YYL1 179 aa30.94■■■□□ 2.54
RBM38-201ENST00000342690 HSPA1LP34931 641 aa30.94■■■□□ 2.54
RBM38-201ENST00000342690 ATP7BP35670 1465 aa30.94■■■□□ 2.54
RBM38-201ENST00000342690 ESCO1Q5FWF5 840 aa30.93■■■□□ 2.54
RBM38-201ENST00000342690 PHLPP1O60346 1717 aa30.93■■■□□ 2.54
RBM38-201ENST00000342690 KIF1AQ12756 1690 aa30.91■■■□□ 2.54
RBM38-201ENST00000342690 TOPAZ1Q8N9V7 1692 aa30.9■■■□□ 2.54
RBM38-201ENST00000342690 TESK2Q96S53 571 aa30.89■■■□□ 2.54
RBM38-201ENST00000342690 EVC2Q86UK5 1308 aa30.89■■■□□ 2.54
RBM38-201ENST00000342690 ITSN1Q15811 1721 aa30.89■■■□□ 2.54
RBM38-201ENST00000342690 COL16A1Q07092 1604 aaPredicted RBP30.87■■■□□ 2.53
RBM38-201ENST00000342690 SRPK2P78362 688 aaKnown RBP30.87■■■□□ 2.53
RBM38-201ENST00000342690 DDX17Q92841 729 aaKnown RBP30.87■■■□□ 2.53
RBM38-201ENST00000342690 CABP2Q9NPB3 220 aa30.87■■■□□ 2.53
RBM38-201ENST00000342690 NUDT16Q96DE0 195 aaKnown RBP30.86■■■□□ 2.53
RBM38-201ENST00000342690 EIF4G2P78344 907 aaKnown RBP eCLIP30.85■■■□□ 2.53
RBM38-201ENST00000342690 PHF8Q9UPP1 1060 aa30.85■■■□□ 2.53
RBM38-201ENST00000342690 FOXO3O43524 673 aa30.8■■■□□ 2.52
RBM38-201ENST00000342690 PMFBP1Q8TBY8 1022 aa30.8■■■□□ 2.52
RBM38-201ENST00000342690 NPHP3Q7Z494 1330 aa30.79■■■□□ 2.52
RBM38-201ENST00000342690 HSPA5P11021 654 aaKnown RBP30.79■■■□□ 2.52
RBM38-201ENST00000342690 CCDC61Q9Y6R9 512 aa30.79■■■□□ 2.52
RBM38-201ENST00000342690 SOS2Q07890 1332 aaPredicted RBP30.77■■■□□ 2.52
RBM38-201ENST00000342690 PXDNQ92626 1479 aa30.77■■■□□ 2.52
RBM38-201ENST00000342690 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
RBM38-201ENST00000342690 DISP3Q9P2K9 1392 aa30.77■■■□□ 2.52
RBM38-201ENST00000342690 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
RBM38-201ENST00000342690 SLC24A1O60721 1099 aa30.74■■■□□ 2.51
RBM38-201ENST00000342690 XPCQ01831 940 aaPredicted RBP30.74■■■□□ 2.51
RBM38-201ENST00000342690 PLEKHG3A1L390 1219 aa30.72■■■□□ 2.51
RBM38-201ENST00000342690 TMF1P82094 1093 aa30.72■■■□□ 2.51
RBM38-201ENST00000342690 POLR3AO14802 1390 aaPredicted RBP30.7■■■□□ 2.51
RBM38-201ENST00000342690 NGDNQ8NEJ9 315 aaKnown RBP30.7■■■□□ 2.51
RBM38-201ENST00000342690 KRT28Q7Z3Y7 464 aa30.69■■■□□ 2.5
RBM38-201ENST00000342690 PUS7Q96PZ0 661 aaKnown RBP30.69■■■□□ 2.5
RBM38-201ENST00000342690 CABP1Q9NZU7 370 aa30.69■■■□□ 2.5
RBM38-201ENST00000342690 SHPRHQ149N8 1683 aa30.68■■■□□ 2.5
RBM38-201ENST00000342690 ACEP12821 1306 aa30.68■■■□□ 2.5
RBM38-201ENST00000342690 JCADQ9P266 1359 aa30.67■■■□□ 2.5
RBM38-201ENST00000342690 TRPM3Q9HCF6 1732 aaPredicted RBP30.67■■■□□ 2.5
RBM38-201ENST00000342690 LRRC59Q96AG4 307 aaKnown RBP30.67■■■□□ 2.5
RBM38-201ENST00000342690 PSME1Q06323 249 aa30.66■■■□□ 2.5
RBM38-201ENST00000342690 AKAP12Q02952 1782 aa30.63■■■□□ 2.49
RBM38-201ENST00000342690 SBNO1A3KN83 1393 aa30.63■■■□□ 2.49
RBM38-201ENST00000342690 PNPLA6Q8IY17 1366 aa30.63■■■□□ 2.49
RBM38-201ENST00000342690 TNS3Q68CZ2 1445 aa30.62■■■□□ 2.49
RBM38-201ENST00000342690 SPATA31A3Q5VYP0 1347 aa30.61■■■□□ 2.49
RBM38-201ENST00000342690 CDCA8Q53HL2 280 aa30.6■■■□□ 2.49
RBM38-201ENST00000342690 CD163L1Q9NR16 1453 aa30.59■■■□□ 2.49
RBM38-201ENST00000342690 TMC1Q8TDI8 760 aa30.59■■■□□ 2.49
RBM38-201ENST00000342690 ALS2Q96Q42 1657 aa30.58■■■□□ 2.49
RBM38-201ENST00000342690 COL22A1Q8NFW1 1626 aaPredicted RBP30.58■■■□□ 2.49
RBM38-201ENST00000342690 CPSF1Q10570 1443 aaKnown RBP30.58■■■□□ 2.49
RBM38-201ENST00000342690 SLC12A5Q9H2X9 1139 aa30.58■■■□□ 2.49
RBM38-201ENST00000342690 USP6P35125 1406 aa30.57■■■□□ 2.48
RBM38-201ENST00000342690 MYOM1P52179 1685 aa30.57■■■□□ 2.48
RBM38-201ENST00000342690 NINLQ9Y2I6 1382 aa30.56■■■□□ 2.48
RBM38-201ENST00000342690 MON2Q7Z3U7 1717 aa30.56■■■□□ 2.48
RBM38-201ENST00000342690 NRKQ7Z2Y5 1582 aa30.54■■■□□ 2.48
RBM38-201ENST00000342690 C11orf95C9JLR9 678 aaPredicted RBP30.53■■■□□ 2.48
RBM38-201ENST00000342690 SPATA31A6Q5VVP1 1343 aa30.52■■■□□ 2.48
RBM38-201ENST00000342690 PAK3O75914 559 aaPredicted RBP30.52■■■□□ 2.48
RBM38-201ENST00000342690 SSH2Q76I76 1423 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms