RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
PKN1-202ENST00000342216 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
PKN1-202ENST00000342216 ATP2B3Q16720 1220 aa18.72■□□□□ 0.59
PKN1-202ENST00000342216 GOLGA6L22H0YM25 854 aa18.71■□□□□ 0.59
PKN1-202ENST00000342216 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
PKN1-202ENST00000342216 MCTP1Q6DN14 999 aa18.71■□□□□ 0.59
PKN1-202ENST00000342216 TMEM51Q9NW97 253 aa18.71■□□□□ 0.59
PKN1-202ENST00000342216 GRIN2AQ12879 1464 aa18.71■□□□□ 0.59
PKN1-202ENST00000342216 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
PKN1-202ENST00000342216 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
PKN1-202ENST00000342216 COL17A1Q9UMD9 1497 aaPredicted RBP18.7■□□□□ 0.58
PKN1-202ENST00000342216 KLHL40Q2TBA0 621 aa18.7■□□□□ 0.58
PKN1-202ENST00000342216 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
PKN1-202ENST00000342216 ZNF710Q8N1W2 664 aa18.7■□□□□ 0.58
PKN1-202ENST00000342216 CSPP1Q1MSJ5 1256 aa18.69■□□□□ 0.58
PKN1-202ENST00000342216 BAG4O95429 457 aaKnown RBP18.69■□□□□ 0.58
PKN1-202ENST00000342216 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
PKN1-202ENST00000342216 RNF214Q8ND24 703 aa18.68■□□□□ 0.58
PKN1-202ENST00000342216 GAS2L2Q8NHY3 880 aa18.68■□□□□ 0.58
PKN1-202ENST00000342216 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
PKN1-202ENST00000342216 TMF1P82094 1093 aa18.68■□□□□ 0.58
PKN1-202ENST00000342216 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
PKN1-202ENST00000342216 PDLIM2Q96JY6 352 aa18.67■□□□□ 0.58
PKN1-202ENST00000342216 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
PKN1-202ENST00000342216 ERBINQ96RT1 1412 aa18.67■□□□□ 0.58
PKN1-202ENST00000342216 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
PKN1-202ENST00000342216 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
PKN1-202ENST00000342216 SNX21Q969T3 373 aa18.65■□□□□ 0.58
PKN1-202ENST00000342216 CHAMP1Q96JM3 812 aa18.65■□□□□ 0.58
PKN1-202ENST00000342216 ZNF830Q96NB3 372 aaPredicted RBP18.65■□□□□ 0.58
PKN1-202ENST00000342216 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
PKN1-202ENST00000342216 PTMAP06454 111 aaKnown RBP18.65■□□□□ 0.58
PKN1-202ENST00000342216 PTMSP20962 102 aa18.65■□□□□ 0.58
PKN1-202ENST00000342216 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
PKN1-202ENST00000342216 GTPBP4Q9BZE4 634 aaKnown RBP18.64■□□□□ 0.57
PKN1-202ENST00000342216 ZNF445P59923 1031 aa18.64■□□□□ 0.57
PKN1-202ENST00000342216 KIF20AO95235 890 aa18.63■□□□□ 0.57
PKN1-202ENST00000342216 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
PKN1-202ENST00000342216 C17orf53Q8N3J3 647 aaPredicted RBP18.63■□□□□ 0.57
PKN1-202ENST00000342216 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
PKN1-202ENST00000342216 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
PKN1-202ENST00000342216 MYRIPQ8NFW9 859 aa18.62■□□□□ 0.57
PKN1-202ENST00000342216 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
PKN1-202ENST00000342216 K7ELQ4 463 aaPredicted RBP18.62■□□□□ 0.57
PKN1-202ENST00000342216 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
PKN1-202ENST00000342216 KIF2CQ99661 725 aa18.62■□□□□ 0.57
PKN1-202ENST00000342216 PRAG1Q86YV5 1406 aa18.61■□□□□ 0.57
PKN1-202ENST00000342216 ANKRD50Q9ULJ7 1429 aa18.61■□□□□ 0.57
PKN1-202ENST00000342216 LETM1O95202 739 aaPredicted RBP18.61■□□□□ 0.57
PKN1-202ENST00000342216 PKP1Q13835 747 aa18.61■□□□□ 0.57
PKN1-202ENST00000342216 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
PKN1-202ENST00000342216 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
PKN1-202ENST00000342216 MAGI1Q96QZ7 1491 aaPredicted RBP18.6■□□□□ 0.57
PKN1-202ENST00000342216 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
PKN1-202ENST00000342216 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
PKN1-202ENST00000342216 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
PKN1-202ENST00000342216 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
PKN1-202ENST00000342216 SYCE3A1L190 88 aa18.6■□□□□ 0.57
PKN1-202ENST00000342216 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
PKN1-202ENST00000342216 KIAA0556O60303 1618 aa18.59■□□□□ 0.57
PKN1-202ENST00000342216 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
PKN1-202ENST00000342216 IPO4Q8TEX9 1081 aaKnown RBP18.59■□□□□ 0.57
PKN1-202ENST00000342216 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
PKN1-202ENST00000342216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
PKN1-202ENST00000342216 FTSJ3Q8IY81 847 aaKnown RBP18.59■□□□□ 0.57
PKN1-202ENST00000342216 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
PKN1-202ENST00000342216 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.56
PKN1-202ENST00000342216 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
PKN1-202ENST00000342216 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
PKN1-202ENST00000342216 U2AF2P26368 475 aaKnown RBP eCLIP18.57■□□□□ 0.56
PKN1-202ENST00000342216 FOXD4L5Q5VV16 416 aaPredicted RBP18.57■□□□□ 0.56
PKN1-202ENST00000342216 PAXIP1Q6ZW49 1069 aaPredicted RBP18.57■□□□□ 0.56
PKN1-202ENST00000342216 FOXD4L4Q8WXT5 416 aaPredicted RBP18.57■□□□□ 0.56
PKN1-202ENST00000342216 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
PKN1-202ENST00000342216 GPT2Q8TD30 523 aa18.56■□□□□ 0.56
PKN1-202ENST00000342216 NSFL1CQ9UNZ2 370 aaKnown RBP18.56■□□□□ 0.56
PKN1-202ENST00000342216 ZNF771Q7L3S4 317 aaPredicted RBP18.55■□□□□ 0.56
PKN1-202ENST00000342216 KDM5DQ9BY66 1539 aa18.55■□□□□ 0.56
PKN1-202ENST00000342216 MCM5P33992 734 aa18.55■□□□□ 0.56
PKN1-202ENST00000342216 TMEM63CQ9P1W3 806 aa18.54■□□□□ 0.56
PKN1-202ENST00000342216 CDK11BP21127 795 aaKnown RBP18.54■□□□□ 0.56
PKN1-202ENST00000342216 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
PKN1-202ENST00000342216 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
PKN1-202ENST00000342216 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
PKN1-202ENST00000342216 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
PKN1-202ENST00000342216 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
PKN1-202ENST00000342216 SCAPERQ9BY12 1400 aa18.52■□□□□ 0.56
PKN1-202ENST00000342216 PDCL2Q8N4E4 241 aa18.52■□□□□ 0.56
PKN1-202ENST00000342216 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
PKN1-202ENST00000342216 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
PKN1-202ENST00000342216 TTC12Q9H892 705 aaPredicted RBP18.5■□□□□ 0.55
PKN1-202ENST00000342216 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
PKN1-202ENST00000342216 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
PKN1-202ENST00000342216 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
PKN1-202ENST00000342216 NUP160Q12769 1436 aa18.49■□□□□ 0.55
PKN1-202ENST00000342216 CLEC17AQ6ZS10 378 aa18.48■□□□□ 0.55
PKN1-202ENST00000342216 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
PKN1-202ENST00000342216 NOLC1Q14978 699 aaKnown RBP eCLIP18.48■□□□□ 0.55
PKN1-202ENST00000342216 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
PKN1-202ENST00000342216 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms