RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
SSX2IP-201ENST00000342203 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 TMEM57Q8N5G2 664 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 ERBINQ96RT1 1412 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 RABEP1Q15276 862 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 NECTIN2Q92692 538 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 TSPY26PQ9H489 355 aa15.27■□□□□ 0.03
SSX2IP-201ENST00000342203 MINK1Q8N4C8 1332 aaPredicted RBP15.26■□□□□ 0.03
SSX2IP-201ENST00000342203 DHX29Q7Z478 1369 aaKnown RBP15.26■□□□□ 0.03
SSX2IP-201ENST00000342203 NPHP1O15259 732 aa15.26■□□□□ 0.03
SSX2IP-201ENST00000342203 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
SSX2IP-201ENST00000342203 FIBPO43427 364 aa15.25■□□□□ 0.03
SSX2IP-201ENST00000342203 MBD3O95983 291 aa15.25■□□□□ 0.03
SSX2IP-201ENST00000342203 FBXW7Q969H0 707 aa15.25■□□□□ 0.03
SSX2IP-201ENST00000342203 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
SSX2IP-201ENST00000342203 GOLGA6L19H0YKK7 550 aa15.24■□□□□ 0.03
SSX2IP-201ENST00000342203 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
SSX2IP-201ENST00000342203 BECN2A8MW95 431 aa15.24■□□□□ 0.03
SSX2IP-201ENST00000342203 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
SSX2IP-201ENST00000342203 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 HMGN5P82970 282 aaKnown RBP15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 PRG4Q92954 1404 aaPredicted RBP15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 SSH1Q8WYL5 1049 aa15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 RBM27Q9P2N5 1060 aaKnown RBP15.23■□□□□ 0.03
SSX2IP-201ENST00000342203 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
SSX2IP-201ENST00000342203 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
SSX2IP-201ENST00000342203 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
SSX2IP-201ENST00000342203 SMC3Q9UQE7 1217 aa15.22■□□□□ 0.03
SSX2IP-201ENST00000342203 EHBP1L1Q8N3D4 1523 aa15.22■□□□□ 0.03
SSX2IP-201ENST00000342203 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
SSX2IP-201ENST00000342203 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.21■□□□□ 0.03
SSX2IP-201ENST00000342203 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
SSX2IP-201ENST00000342203 WDR63Q8IWG1 891 aa15.21■□□□□ 0.03
SSX2IP-201ENST00000342203 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.03
SSX2IP-201ENST00000342203 LMOD3Q0VAK6 560 aa15.2■□□□□ 0.02
SSX2IP-201ENST00000342203 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
SSX2IP-201ENST00000342203 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
SSX2IP-201ENST00000342203 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 RLBP1P12271 317 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 HTATSF1O43719 755 aaKnown RBP15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 GCC1Q96CN9 775 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 ABCC5O15440 1437 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
SSX2IP-201ENST00000342203 PRKAR2BP31323 418 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 KDM2BQ8NHM5 1336 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 MLECQ14165 292 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 TRIM5Q9C035 493 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 NINLQ9Y2I6 1382 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
SSX2IP-201ENST00000342203 TRIM27P14373 513 aa15.17■□□□□ 0.02
SSX2IP-201ENST00000342203 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
SSX2IP-201ENST00000342203 FOSBP53539 338 aa15.17■□□□□ 0.02
SSX2IP-201ENST00000342203 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
SSX2IP-201ENST00000342203 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 H3BQV1 296 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 IFFO2Q5TF58 517 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 GNAI1P63096 354 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 PDCL2Q8N4E4 241 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 ZNF830Q96NB3 372 aaPredicted RBP15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 CWC22Q9HCG8 908 aaKnown RBP15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 SF3A1Q15459 793 aaKnown RBP15.16■□□□□ 0.02
SSX2IP-201ENST00000342203 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
SSX2IP-201ENST00000342203 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
SSX2IP-201ENST00000342203 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
SSX2IP-201ENST00000342203 ROCK1Q13464 1354 aa15.15■□□□□ 0.02
SSX2IP-201ENST00000342203 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
SSX2IP-201ENST00000342203 NCAPD3P42695 1498 aa15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 TWISTNBQ3B726 338 aaPredicted RBP15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 IGSF3O75054 1194 aa15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 KLHL40Q2TBA0 621 aa15.14■□□□□ 0.01
SSX2IP-201ENST00000342203 TBC1D9Q6ZT07 1266 aa15.13■□□□□ 0.01
SSX2IP-201ENST00000342203 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
SSX2IP-201ENST00000342203 AFAP1Q8N556 730 aa15.13■□□□□ 0.01
SSX2IP-201ENST00000342203 FAM184AQ8NB25 1140 aa15.13■□□□□ 0.01
SSX2IP-201ENST00000342203 PER1O15534 1290 aaPredicted RBP15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 SMARCA5O60264 1052 aaPredicted RBP15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 FAM177BA6PVY3 158 aa15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 ERC2O15083 957 aa15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 ZSCAN23Q3MJ62 389 aa15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 A0A0G2JS52 829 aa15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 ERICH4A6NGS2 130 aa15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 EPRSP07814 1512 aaKnown RBP15.12■□□□□ 0.01
SSX2IP-201ENST00000342203 GAS2L2Q8NHY3 880 aa15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 TPM4P67936 248 aa15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
SSX2IP-201ENST00000342203 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms