RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 SIRT1Q96EB6 747 aa26.8■■□□□ 1.88
GTF3C5-201ENST00000342018 CHD2O14647 1828 aaKnown RBP26.79■■□□□ 1.88
GTF3C5-201ENST00000342018 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
GTF3C5-201ENST00000342018 EVC2Q86UK5 1308 aa26.79■■□□□ 1.88
GTF3C5-201ENST00000342018 TULP4Q9NRJ4 1543 aa26.76■■□□□ 1.87
GTF3C5-201ENST00000342018 PTCH1Q13635 1447 aa26.76■■□□□ 1.87
GTF3C5-201ENST00000342018 CABP2Q9NPB3 220 aa26.75■■□□□ 1.87
GTF3C5-201ENST00000342018 SRPK2P78362 688 aaKnown RBP26.75■■□□□ 1.87
GTF3C5-201ENST00000342018 RBM33Q96EV2 1170 aaKnown RBP26.73■■□□□ 1.87
GTF3C5-201ENST00000342018 CDK19Q9BWU1 502 aa26.72■■□□□ 1.87
GTF3C5-201ENST00000342018 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.86
GTF3C5-201ENST00000342018 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
GTF3C5-201ENST00000342018 TMC1Q8TDI8 760 aa26.69■■□□□ 1.86
GTF3C5-201ENST00000342018 WASLO00401 505 aaPredicted RBP26.68■■□□□ 1.86
GTF3C5-201ENST00000342018 NWD1Q149M9 1564 aa26.66■■□□□ 1.86
GTF3C5-201ENST00000342018 PROSER2Q86WR7 435 aaPredicted RBP26.66■■□□□ 1.86
GTF3C5-201ENST00000342018 PANK3Q9H999 370 aa26.65■■□□□ 1.86
GTF3C5-201ENST00000342018 C14orf37Q86TY3 774 aa26.64■■□□□ 1.86
GTF3C5-201ENST00000342018 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
GTF3C5-201ENST00000342018 MYOM1P52179 1685 aa26.63■■□□□ 1.85
GTF3C5-201ENST00000342018 NUTM2FA1L443 756 aa26.63■■□□□ 1.85
GTF3C5-201ENST00000342018 SLC12A5Q9H2X9 1139 aa26.63■■□□□ 1.85
GTF3C5-201ENST00000342018 CNGB1Q14028 1251 aaPredicted RBP26.62■■□□□ 1.85
GTF3C5-201ENST00000342018 PUS7Q96PZ0 661 aaKnown RBP26.62■■□□□ 1.85
GTF3C5-201ENST00000342018 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
GTF3C5-201ENST00000342018 ZNF335Q9H4Z2 1342 aaPredicted RBP26.6■■□□□ 1.85
GTF3C5-201ENST00000342018 ADGRB2O60241 1585 aa26.6■■□□□ 1.85
GTF3C5-201ENST00000342018 ATAD2Q6PL18 1390 aa26.6■■□□□ 1.85
GTF3C5-201ENST00000342018 NKTRP30414 1462 aaKnown RBP26.59■■□□□ 1.85
GTF3C5-201ENST00000342018 MIER1Q8N108 512 aa26.59■■□□□ 1.85
GTF3C5-201ENST00000342018 NUDT16Q96DE0 195 aaKnown RBP26.57■■□□□ 1.84
GTF3C5-201ENST00000342018 NALCNQ8IZF0 1738 aa26.56■■□□□ 1.84
GTF3C5-201ENST00000342018 ANP32CO43423 234 aa26.55■■□□□ 1.84
GTF3C5-201ENST00000342018 CABP1Q9NZU7 370 aa26.55■■□□□ 1.84
GTF3C5-201ENST00000342018 TMEM94Q12767 1356 aa26.54■■□□□ 1.84
GTF3C5-201ENST00000342018 PRR36Q9H6K5 1346 aa26.53■■□□□ 1.84
GTF3C5-201ENST00000342018 ADGRL3Q9HAR2 1447 aa26.53■■□□□ 1.84
GTF3C5-201ENST00000342018 CCDC61Q9Y6R9 512 aa26.51■■□□□ 1.83
GTF3C5-201ENST00000342018 ATP7BP35670 1465 aa26.5■■□□□ 1.83
GTF3C5-201ENST00000342018 PPIP5K1Q6PFW1 1433 aa26.5■■□□□ 1.83
GTF3C5-201ENST00000342018 PER1O15534 1290 aaPredicted RBP26.5■■□□□ 1.83
GTF3C5-201ENST00000342018 KNSTRNQ9Y448 316 aa26.5■■□□□ 1.83
GTF3C5-201ENST00000342018 NINLQ9Y2I6 1382 aa26.5■■□□□ 1.83
GTF3C5-201ENST00000342018 CARD14Q9BXL6 1004 aa26.48■■□□□ 1.83
GTF3C5-201ENST00000342018 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
GTF3C5-201ENST00000342018 ANKRD36BQ8N2N9 1353 aa26.47■■□□□ 1.83
GTF3C5-201ENST00000342018 TERF2IPQ9NYB0 399 aa26.47■■□□□ 1.83
GTF3C5-201ENST00000342018 FMN2Q9NZ56 1722 aa26.46■■□□□ 1.83
GTF3C5-201ENST00000342018 HDGFL2Q7Z4V5 671 aaPredicted RBP26.45■■□□□ 1.83
GTF3C5-201ENST00000342018 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.83
GTF3C5-201ENST00000342018 A0A1W2PP64 1363 aa26.45■■□□□ 1.83
GTF3C5-201ENST00000342018 USP32Q8NFA0 1604 aa26.45■■□□□ 1.82
GTF3C5-201ENST00000342018 CC2D1BQ5T0F9 858 aaKnown RBP26.44■■□□□ 1.82
GTF3C5-201ENST00000342018 NSD3Q9BZ95 1437 aa26.44■■□□□ 1.82
GTF3C5-201ENST00000342018 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
GTF3C5-201ENST00000342018 RGPD8O14715 1765 aaPredicted RBP26.43■■□□□ 1.82
GTF3C5-201ENST00000342018 PMFBP1Q8TBY8 1022 aa26.43■■□□□ 1.82
GTF3C5-201ENST00000342018 CD163L1Q9NR16 1453 aa26.42■■□□□ 1.82
GTF3C5-201ENST00000342018 PRKRIP1Q9H875 184 aaPredicted RBP26.41■■□□□ 1.82
GTF3C5-201ENST00000342018 ATF3P18847 181 aa26.41■■□□□ 1.82
GTF3C5-201ENST00000342018 ANKARQ7Z5J8 1434 aa26.41■■□□□ 1.82
GTF3C5-201ENST00000342018 NCOA3Q9Y6Q9 1424 aa26.41■■□□□ 1.82
GTF3C5-201ENST00000342018 TOPAZ1Q8N9V7 1692 aa26.4■■□□□ 1.82
GTF3C5-201ENST00000342018 MSH6P52701 1360 aa26.39■■□□□ 1.82
GTF3C5-201ENST00000342018 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
GTF3C5-201ENST00000342018 KTN1Q86UP2 1357 aaKnown RBP26.38■■□□□ 1.81
GTF3C5-201ENST00000342018 AMER1Q5JTC6 1135 aaPredicted RBP26.38■■□□□ 1.81
GTF3C5-201ENST00000342018 ACEP12821 1306 aa26.37■■□□□ 1.81
GTF3C5-201ENST00000342018 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
GTF3C5-201ENST00000342018 PLEKHG3A1L390 1219 aa26.37■■□□□ 1.81
GTF3C5-201ENST00000342018 ESCO1Q5FWF5 840 aa26.37■■□□□ 1.81
GTF3C5-201ENST00000342018 NGDNQ8NEJ9 315 aaKnown RBP26.36■■□□□ 1.81
GTF3C5-201ENST00000342018 CPSF1Q10570 1443 aaKnown RBP26.35■■□□□ 1.81
GTF3C5-201ENST00000342018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.34■■□□□ 1.81
GTF3C5-201ENST00000342018 CGNL1Q0VF96 1302 aa26.34■■□□□ 1.81
GTF3C5-201ENST00000342018 CADPS2Q86UW7 1296 aa26.33■■□□□ 1.81
GTF3C5-201ENST00000342018 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
GTF3C5-201ENST00000342018 PHF8Q9UPP1 1060 aa26.32■■□□□ 1.8
GTF3C5-201ENST00000342018 DCCP43146 1447 aa26.32■■□□□ 1.8
GTF3C5-201ENST00000342018 ZNF692Q9BU19 519 aaPredicted RBP26.31■■□□□ 1.8
GTF3C5-201ENST00000342018 RALBP1Q15311 655 aa26.3■■□□□ 1.8
GTF3C5-201ENST00000342018 AKAP12Q02952 1782 aa26.3■■□□□ 1.8
GTF3C5-201ENST00000342018 C1orf167Q5SNV9 1468 aa26.3■■□□□ 1.8
GTF3C5-201ENST00000342018 MST1RQ04912 1400 aa26.28■■□□□ 1.8
GTF3C5-201ENST00000342018 EDC4Q6P2E9 1401 aaKnown RBP26.28■■□□□ 1.8
GTF3C5-201ENST00000342018 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
GTF3C5-201ENST00000342018 PARD3Q8TEW0 1356 aa26.27■■□□□ 1.8
GTF3C5-201ENST00000342018 MON2Q7Z3U7 1717 aa26.27■■□□□ 1.8
GTF3C5-201ENST00000342018 GGNBP2Q9H3C7 697 aa26.27■■□□□ 1.8
GTF3C5-201ENST00000342018 POLR3AO14802 1390 aaPredicted RBP26.27■■□□□ 1.8
GTF3C5-201ENST00000342018 NPC1L1Q9UHC9 1359 aa26.27■■□□□ 1.8
GTF3C5-201ENST00000342018 USP6P35125 1406 aa26.25■■□□□ 1.79
GTF3C5-201ENST00000342018 FYB1O15117 783 aa26.25■■□□□ 1.79
GTF3C5-201ENST00000342018 MORC1Q86VD1 984 aa26.25■■□□□ 1.79
GTF3C5-201ENST00000342018 TNNT2P45379 298 aaPredicted RBP26.24■■□□□ 1.79
GTF3C5-201ENST00000342018 CCER2I3L3R5 266 aa26.23■■□□□ 1.79
GTF3C5-201ENST00000342018 FOXO3O43524 673 aa26.23■■□□□ 1.79
GTF3C5-201ENST00000342018 NME9Q86XW9 330 aa26.23■■□□□ 1.79
GTF3C5-201ENST00000342018 MYBBP1AQ9BQG0 1328 aaKnown RBP26.23■■□□□ 1.79
GTF3C5-201ENST00000342018 TTC21BQ7Z4L5 1316 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms