RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 PTMSP20962 102 aa18.66■□□□□ 0.58
PCDHB13-201ENST00000341948 CCDC61Q9Y6R9 512 aa18.66■□□□□ 0.58
PCDHB13-201ENST00000341948 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
PCDHB13-201ENST00000341948 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
PCDHB13-201ENST00000341948 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
PCDHB13-201ENST00000341948 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
PCDHB13-201ENST00000341948 AKNAQ7Z591 1439 aa18.65■□□□□ 0.58
PCDHB13-201ENST00000341948 RIC3Q7Z5B4 369 aa18.64■□□□□ 0.57
PCDHB13-201ENST00000341948 RILPL2Q969X0 211 aa18.64■□□□□ 0.57
PCDHB13-201ENST00000341948 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
PCDHB13-201ENST00000341948 DEKP35659 375 aaKnown RBP18.64■□□□□ 0.57
PCDHB13-201ENST00000341948 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
PCDHB13-201ENST00000341948 ATAD2Q6PL18 1390 aa18.63■□□□□ 0.57
PCDHB13-201ENST00000341948 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
PCDHB13-201ENST00000341948 SMG6Q86US8 1419 aaKnown RBP18.62■□□□□ 0.57
PCDHB13-201ENST00000341948 RTN4Q9NQC3 1192 aaKnown RBP18.62■□□□□ 0.57
PCDHB13-201ENST00000341948 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
PCDHB13-201ENST00000341948 KLHL34Q8N239 644 aa18.62■□□□□ 0.57
PCDHB13-201ENST00000341948 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 NCOA1Q15788 1441 aa18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 DDX54Q8TDD1 881 aaKnown RBP18.61■□□□□ 0.57
PCDHB13-201ENST00000341948 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
PCDHB13-201ENST00000341948 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
PCDHB13-201ENST00000341948 FAM161AQ3B820 660 aa18.6■□□□□ 0.57
PCDHB13-201ENST00000341948 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
PCDHB13-201ENST00000341948 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
PCDHB13-201ENST00000341948 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
PCDHB13-201ENST00000341948 PDE4AP27815 886 aa18.59■□□□□ 0.57
PCDHB13-201ENST00000341948 G3BP1Q13283 466 aaKnown RBP eCLIP18.59■□□□□ 0.57
PCDHB13-201ENST00000341948 NOL8Q76FK4 1167 aaKnown RBP18.59■□□□□ 0.57
PCDHB13-201ENST00000341948 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.57
PCDHB13-201ENST00000341948 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
PCDHB13-201ENST00000341948 VPS37DQ86XT2 251 aa18.58■□□□□ 0.56
PCDHB13-201ENST00000341948 RRS1Q15050 365 aaKnown RBP18.58■□□□□ 0.56
PCDHB13-201ENST00000341948 ATP10BO94823 1461 aa18.57■□□□□ 0.56
PCDHB13-201ENST00000341948 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
PCDHB13-201ENST00000341948 IFIT2P09913 472 aaKnown RBP18.57■□□□□ 0.56
PCDHB13-201ENST00000341948 GZF1Q9H116 711 aaPredicted RBP18.57■□□□□ 0.56
PCDHB13-201ENST00000341948 ST18O60284 1047 aa18.56■□□□□ 0.56
PCDHB13-201ENST00000341948 MSNP26038 577 aaKnown RBP18.56■□□□□ 0.56
PCDHB13-201ENST00000341948 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
PCDHB13-201ENST00000341948 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
PCDHB13-201ENST00000341948 LRRFIP1Q32MZ4 808 aaKnown RBP18.55■□□□□ 0.56
PCDHB13-201ENST00000341948 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
PCDHB13-201ENST00000341948 CLSTN1O94985 981 aa18.54■□□□□ 0.56
PCDHB13-201ENST00000341948 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
PCDHB13-201ENST00000341948 CCDC30Q5VVM6 783 aa18.54■□□□□ 0.56
PCDHB13-201ENST00000341948 FOXO3O43524 673 aa18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 CABP4P57796 275 aa18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 DRC7Q8IY82 874 aa18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 THOC2Q8NI27 1593 aaKnown RBP18.53■□□□□ 0.56
PCDHB13-201ENST00000341948 PLCH2O75038 1416 aa18.52■□□□□ 0.56
PCDHB13-201ENST00000341948 FBXW7Q969H0 707 aa18.52■□□□□ 0.55
PCDHB13-201ENST00000341948 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 CHAF1AQ13111 956 aaPredicted RBP18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 KCNH5Q8NCM2 988 aa18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
PCDHB13-201ENST00000341948 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
PCDHB13-201ENST00000341948 TEX14Q8IWB6 1497 aa18.5■□□□□ 0.55
PCDHB13-201ENST00000341948 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
PCDHB13-201ENST00000341948 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
PCDHB13-201ENST00000341948 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
PCDHB13-201ENST00000341948 TWISTNBQ3B726 338 aaPredicted RBP18.49■□□□□ 0.55
PCDHB13-201ENST00000341948 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
PCDHB13-201ENST00000341948 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
PCDHB13-201ENST00000341948 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
PCDHB13-201ENST00000341948 APPP05067 770 aa18.48■□□□□ 0.55
PCDHB13-201ENST00000341948 HDGFL1Q5TGJ6 251 aa18.48■□□□□ 0.55
PCDHB13-201ENST00000341948 RUFY2Q8WXA3 655 aa18.48■□□□□ 0.55
PCDHB13-201ENST00000341948 TNRQ92752 1358 aa18.47■□□□□ 0.55
PCDHB13-201ENST00000341948 KIF6Q6ZMV9 814 aa18.47■□□□□ 0.55
PCDHB13-201ENST00000341948 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
PCDHB13-201ENST00000341948 AMOTL1Q8IY63 956 aa18.47■□□□□ 0.55
PCDHB13-201ENST00000341948 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 NSD3Q9BZ95 1437 aa18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 CSPP1Q1MSJ5 1256 aa18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.55
PCDHB13-201ENST00000341948 PNISRQ8TF01 805 aaKnown RBP18.46■□□□□ 0.54
PCDHB13-201ENST00000341948 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
PCDHB13-201ENST00000341948 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
PCDHB13-201ENST00000341948 NOS1P29475 1434 aa18.45■□□□□ 0.54
PCDHB13-201ENST00000341948 GOLGA6L3A6NEY3 463 aa18.44■□□□□ 0.54
PCDHB13-201ENST00000341948 ADAMTS2O95450 1211 aa18.44■□□□□ 0.54
PCDHB13-201ENST00000341948 AAMPQ13685 434 aa18.44■□□□□ 0.54
PCDHB13-201ENST00000341948 GNAI3P08754 354 aa18.44■□□□□ 0.54
PCDHB13-201ENST00000341948 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
PCDHB13-201ENST00000341948 LNPKQ9C0E8 428 aa18.43■□□□□ 0.54
PCDHB13-201ENST00000341948 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
PCDHB13-201ENST00000341948 NME9Q86XW9 330 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms