RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 IQGAP3Q86VI3 1631 aa16.76■□□□□ 0.27
COL22A1-202ENST00000341807 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
COL22A1-202ENST00000341807 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
COL22A1-202ENST00000341807 HSP90AA1P07900 732 aaKnown RBP16.74■□□□□ 0.27
COL22A1-202ENST00000341807 FANCAO15360 1455 aa16.74■□□□□ 0.27
COL22A1-202ENST00000341807 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
COL22A1-202ENST00000341807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL22A1-202ENST00000341807 ADGRL1O94910 1474 aa16.72■□□□□ 0.27
COL22A1-202ENST00000341807 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
COL22A1-202ENST00000341807 NPC1L1Q9UHC9 1359 aa16.72■□□□□ 0.27
COL22A1-202ENST00000341807 RIPK4P57078 832 aa16.72■□□□□ 0.27
COL22A1-202ENST00000341807 ERVK-7P63135 1459 aa16.71■□□□□ 0.27
COL22A1-202ENST00000341807 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.26
COL22A1-202ENST00000341807 RAPGEF3O95398 923 aa16.7■□□□□ 0.26
COL22A1-202ENST00000341807 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
COL22A1-202ENST00000341807 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
COL22A1-202ENST00000341807 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
COL22A1-202ENST00000341807 FBLN1P23142 703 aa16.69■□□□□ 0.26
COL22A1-202ENST00000341807 LNPKQ9C0E8 428 aa16.69■□□□□ 0.26
COL22A1-202ENST00000341807 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
COL22A1-202ENST00000341807 PLXNC1O60486 1568 aa16.69■□□□□ 0.26
COL22A1-202ENST00000341807 SSH1Q8WYL5 1049 aa16.68■□□□□ 0.26
COL22A1-202ENST00000341807 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
COL22A1-202ENST00000341807 NOB1Q9ULX3 412 aaKnown RBP16.68■□□□□ 0.26
COL22A1-202ENST00000341807 CFAP65Q6ZU64 1925 aaKnown RBP16.68■□□□□ 0.26
COL22A1-202ENST00000341807 C22orf23Q9BZE7 217 aa16.68■□□□□ 0.26
COL22A1-202ENST00000341807 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 ABCC1P33527 1531 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 SYNMO15061 1565 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 USP19O94966 1318 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 PTPRTO14522 1441 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
COL22A1-202ENST00000341807 TRPM2O94759 1503 aa16.66■□□□□ 0.26
COL22A1-202ENST00000341807 HMOX1P09601 288 aa16.66■□□□□ 0.26
COL22A1-202ENST00000341807 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
COL22A1-202ENST00000341807 CHD1O14646 1710 aa16.66■□□□□ 0.26
COL22A1-202ENST00000341807 TRIM27P14373 513 aa16.66■□□□□ 0.26
COL22A1-202ENST00000341807 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
COL22A1-202ENST00000341807 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
COL22A1-202ENST00000341807 TMEM57Q8N5G2 664 aa16.64■□□□□ 0.26
COL22A1-202ENST00000341807 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.26
COL22A1-202ENST00000341807 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.26
COL22A1-202ENST00000341807 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
COL22A1-202ENST00000341807 LAMC1P11047 1609 aa16.64■□□□□ 0.25
COL22A1-202ENST00000341807 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
COL22A1-202ENST00000341807 PRAM1Q96QH2 718 aa16.64■□□□□ 0.25
COL22A1-202ENST00000341807 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
COL22A1-202ENST00000341807 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
COL22A1-202ENST00000341807 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
COL22A1-202ENST00000341807 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
COL22A1-202ENST00000341807 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
COL22A1-202ENST00000341807 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
COL22A1-202ENST00000341807 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
COL22A1-202ENST00000341807 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
COL22A1-202ENST00000341807 APBB1O00213 710 aa16.62■□□□□ 0.25
COL22A1-202ENST00000341807 MLECQ14165 292 aa16.61■□□□□ 0.25
COL22A1-202ENST00000341807 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
COL22A1-202ENST00000341807 IDI1Q13907 227 aa16.61■□□□□ 0.25
COL22A1-202ENST00000341807 L1TD1Q5T7N2 865 aaKnown RBP16.6■□□□□ 0.25
COL22A1-202ENST00000341807 CABP1Q9NZU7 370 aa16.6■□□□□ 0.25
COL22A1-202ENST00000341807 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
COL22A1-202ENST00000341807 SOX12O15370 315 aa16.59■□□□□ 0.25
COL22A1-202ENST00000341807 PRKAR2BP31323 418 aa16.59■□□□□ 0.25
COL22A1-202ENST00000341807 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
COL22A1-202ENST00000341807 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
COL22A1-202ENST00000341807 AAMPQ13685 434 aa16.59■□□□□ 0.25
COL22A1-202ENST00000341807 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
COL22A1-202ENST00000341807 CHMP5Q9NZZ3 219 aa16.57■□□□□ 0.24
COL22A1-202ENST00000341807 IQGAP1P46940 1657 aa16.56■□□□□ 0.24
COL22A1-202ENST00000341807 FYB1O15117 783 aa16.56■□□□□ 0.24
COL22A1-202ENST00000341807 ASXL2Q76L83 1435 aa16.56■□□□□ 0.24
COL22A1-202ENST00000341807 MCM4P33991 863 aa16.56■□□□□ 0.24
COL22A1-202ENST00000341807 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
COL22A1-202ENST00000341807 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
COL22A1-202ENST00000341807 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
COL22A1-202ENST00000341807 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
COL22A1-202ENST00000341807 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
COL22A1-202ENST00000341807 RPGRIP1LQ68CZ1 1315 aa16.54■□□□□ 0.24
COL22A1-202ENST00000341807 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
COL22A1-202ENST00000341807 TRAK2O60296 914 aa16.54■□□□□ 0.24
COL22A1-202ENST00000341807 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
COL22A1-202ENST00000341807 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
COL22A1-202ENST00000341807 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
COL22A1-202ENST00000341807 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
COL22A1-202ENST00000341807 NPATQ14207 1427 aa16.53■□□□□ 0.24
COL22A1-202ENST00000341807 WAPLQ7Z5K2 1190 aa16.53■□□□□ 0.24
COL22A1-202ENST00000341807 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
COL22A1-202ENST00000341807 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.24
COL22A1-202ENST00000341807 CLASP1Q7Z460 1538 aa16.52■□□□□ 0.23
COL22A1-202ENST00000341807 ABCA6Q8N139 1617 aa16.52■□□□□ 0.23
COL22A1-202ENST00000341807 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
COL22A1-202ENST00000341807 NCLP19338 710 aaKnown RBP16.51■□□□□ 0.23
COL22A1-202ENST00000341807 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
COL22A1-202ENST00000341807 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
COL22A1-202ENST00000341807 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
COL22A1-202ENST00000341807 PANK2Q9BZ23 570 aa16.51■□□□□ 0.23
COL22A1-202ENST00000341807 TET3O43151 1660 aa16.5■□□□□ 0.23
COL22A1-202ENST00000341807 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
COL22A1-202ENST00000341807 MYOM2P54296 1465 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms