RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
SEMA6C-201ENST00000341697 HSP90B1P14625 803 aaKnown RBP24.24■■□□□ 1.47
SEMA6C-201ENST00000341697 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
SEMA6C-201ENST00000341697 SLKQ9H2G2 1235 aaPredicted RBP24.23■■□□□ 1.47
SEMA6C-201ENST00000341697 GOLGA6L6A8MZA4 724 aa24.23■■□□□ 1.47
SEMA6C-201ENST00000341697 NUP153P49790 1475 aaKnown RBP24.22■■□□□ 1.47
SEMA6C-201ENST00000341697 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
SEMA6C-201ENST00000341697 TATP17735 454 aaPredicted RBP24.22■■□□□ 1.47
SEMA6C-201ENST00000341697 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
SEMA6C-201ENST00000341697 SULT6B1Q6IMI4 303 aa24.21■■□□□ 1.47
SEMA6C-201ENST00000341697 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
SEMA6C-201ENST00000341697 TOMM22Q9NS69 142 aa24.2■■□□□ 1.46
SEMA6C-201ENST00000341697 HTATSF1O43719 755 aaKnown RBP24.2■■□□□ 1.46
SEMA6C-201ENST00000341697 CEBPAP49715 358 aaPredicted RBP24.2■■□□□ 1.46
SEMA6C-201ENST00000341697 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.46
SEMA6C-201ENST00000341697 WAPLQ7Z5K2 1190 aa24.2■■□□□ 1.46
SEMA6C-201ENST00000341697 LRRFIP1Q32MZ4 808 aaKnown RBP24.19■■□□□ 1.46
SEMA6C-201ENST00000341697 ST18O60284 1047 aa24.19■■□□□ 1.46
SEMA6C-201ENST00000341697 AIMP1Q12904 312 aaKnown RBP24.19■■□□□ 1.46
SEMA6C-201ENST00000341697 G3BP1Q13283 466 aaKnown RBP eCLIP24.19■■□□□ 1.46
SEMA6C-201ENST00000341697 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
SEMA6C-201ENST00000341697 IFIT2P09913 472 aaKnown RBP24.18■■□□□ 1.46
SEMA6C-201ENST00000341697 FAM161AQ3B820 660 aa24.18■■□□□ 1.46
SEMA6C-201ENST00000341697 PTMSP20962 102 aa24.18■■□□□ 1.46
SEMA6C-201ENST00000341697 AAMPQ13685 434 aa24.17■■□□□ 1.46
SEMA6C-201ENST00000341697 ADGRF5Q8IZF2 1346 aa24.17■■□□□ 1.46
SEMA6C-201ENST00000341697 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
SEMA6C-201ENST00000341697 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
SEMA6C-201ENST00000341697 TEX14Q8IWB6 1497 aa24.16■■□□□ 1.46
SEMA6C-201ENST00000341697 NRDCO43847 1150 aa24.16■■□□□ 1.46
SEMA6C-201ENST00000341697 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
SEMA6C-201ENST00000341697 DIAPH3Q9NSV4 1193 aa24.16■■□□□ 1.46
SEMA6C-201ENST00000341697 CTTNBP2Q8WZ74 1663 aa24.16■■□□□ 1.46
SEMA6C-201ENST00000341697 WDR7Q9Y4E6 1490 aa24.15■■□□□ 1.46
SEMA6C-201ENST00000341697 DNTTIP2Q5QJE6 756 aaKnown RBP24.15■■□□□ 1.46
SEMA6C-201ENST00000341697 TOM1L2Q6ZVM7 507 aa24.15■■□□□ 1.46
SEMA6C-201ENST00000341697 NOL8Q76FK4 1167 aaKnown RBP24.14■■□□□ 1.46
SEMA6C-201ENST00000341697 KIAA0556O60303 1618 aa24.14■■□□□ 1.46
SEMA6C-201ENST00000341697 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.45
SEMA6C-201ENST00000341697 PRDM11Q9NQV5 511 aa24.13■■□□□ 1.45
SEMA6C-201ENST00000341697 CDCA7LQ96GN5 454 aa24.13■■□□□ 1.45
SEMA6C-201ENST00000341697 RUFY2Q8WXA3 655 aa24.13■■□□□ 1.45
SEMA6C-201ENST00000341697 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
SEMA6C-201ENST00000341697 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 WDR62O43379 1518 aa24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 KDM5BQ9UGL1 1544 aa24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 PANK1Q8TE04 598 aa24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 AMOTL2Q9Y2J4 779 aa24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 PNISRQ8TF01 805 aaKnown RBP24.12■■□□□ 1.45
SEMA6C-201ENST00000341697 UBTFL1P0CB47 393 aaPredicted RBP24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 XPCQ01831 940 aaPredicted RBP24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 TWISTNBQ3B726 338 aaPredicted RBP24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 PDE4AP27815 886 aa24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 IPO9Q96P70 1041 aaKnown RBP24.11■■□□□ 1.45
SEMA6C-201ENST00000341697 SPG7Q9UQ90 795 aa24.1■■□□□ 1.45
SEMA6C-201ENST00000341697 KIF3AQ9Y496 699 aa24.1■■□□□ 1.45
SEMA6C-201ENST00000341697 NOS1P29475 1434 aa24.09■■□□□ 1.45
SEMA6C-201ENST00000341697 NUTM2BA6NNL0 878 aaPredicted RBP24.09■■□□□ 1.45
SEMA6C-201ENST00000341697 NUTM2EB1AL46 878 aaPredicted RBP24.09■■□□□ 1.45
SEMA6C-201ENST00000341697 NUTM2AQ8IVF1 878 aaPredicted RBP24.09■■□□□ 1.45
SEMA6C-201ENST00000341697 KCNH5Q8NCM2 988 aa24.09■■□□□ 1.45
SEMA6C-201ENST00000341697 RPRD2Q5VT52 1461 aaKnown RBP24.08■■□□□ 1.45
SEMA6C-201ENST00000341697 TSHZ2Q9NRE2 1034 aa24.08■■□□□ 1.45
SEMA6C-201ENST00000341697 VPS37DQ86XT2 251 aa24.08■■□□□ 1.44
SEMA6C-201ENST00000341697 ITSN2Q9NZM3 1697 aa24.08■■□□□ 1.44
SEMA6C-201ENST00000341697 REC8O95072 547 aa24.07■■□□□ 1.44
SEMA6C-201ENST00000341697 RBM42Q9BTD8 480 aaKnown RBP24.07■■□□□ 1.44
SEMA6C-201ENST00000341697 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
SEMA6C-201ENST00000341697 FCHSD2O94868 740 aa24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 GNAI3P08754 354 aa24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 WDR63Q8IWG1 891 aa24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 NOL10Q9BSC4 688 aaKnown RBP24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 DUOX2Q9NRD8 1548 aa24.06■■□□□ 1.44
SEMA6C-201ENST00000341697 CABP4P57796 275 aa24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 L1TD1Q5T7N2 865 aaKnown RBP24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 FOXD4L1Q9NU39 408 aa24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 A2MP01023 1474 aa24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 WASLO00401 505 aaPredicted RBP24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
SEMA6C-201ENST00000341697 CHMP4CQ96CF2 233 aa24.04■■□□□ 1.44
SEMA6C-201ENST00000341697 TNRQ92752 1358 aa24.04■■□□□ 1.44
SEMA6C-201ENST00000341697 DDX54Q8TDD1 881 aaKnown RBP24.04■■□□□ 1.44
SEMA6C-201ENST00000341697 TSR2Q969E8 191 aaKnown RBP24.04■■□□□ 1.44
SEMA6C-201ENST00000341697 SYAP1Q96A49 352 aaPredicted RBP24.04■■□□□ 1.44
SEMA6C-201ENST00000341697 ZC3H6P61129 1189 aaKnown RBP24.03■■□□□ 1.44
SEMA6C-201ENST00000341697 PIP4K2BP78356 416 aa24.03■■□□□ 1.44
SEMA6C-201ENST00000341697 NUP160Q12769 1436 aa24.03■■□□□ 1.44
SEMA6C-201ENST00000341697 HDGFL1Q5TGJ6 251 aa24.03■■□□□ 1.44
SEMA6C-201ENST00000341697 ERC2O15083 957 aa24.02■■□□□ 1.44
SEMA6C-201ENST00000341697 CSPP1Q1MSJ5 1256 aa24.02■■□□□ 1.44
SEMA6C-201ENST00000341697 LNPKQ9C0E8 428 aa24.02■■□□□ 1.44
SEMA6C-201ENST00000341697 CCDC34Q96HJ3 373 aa24.02■■□□□ 1.44
SEMA6C-201ENST00000341697 PHF8Q9UPP1 1060 aa24.02■■□□□ 1.44
SEMA6C-201ENST00000341697 ZKSCAN1P17029 563 aaPredicted RBP24.01■■□□□ 1.43
SEMA6C-201ENST00000341697 SCAF11Q99590 1463 aaKnown RBP24.01■■□□□ 1.43
SEMA6C-201ENST00000341697 KIF6Q6ZMV9 814 aa24.01■■□□□ 1.43
SEMA6C-201ENST00000341697 AMOTL1Q8IY63 956 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms