RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 EVC2Q86UK5 1308 aa18.69■□□□□ 0.58
ATF3-202ENST00000341491 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
ATF3-202ENST00000341491 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
ATF3-202ENST00000341491 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
ATF3-202ENST00000341491 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
ATF3-202ENST00000341491 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
ATF3-202ENST00000341491 SETD1BQ9UPS6 1966 aaKnown RBP18.67■□□□□ 0.58
ATF3-202ENST00000341491 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
ATF3-202ENST00000341491 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
ATF3-202ENST00000341491 AMER1Q5JTC6 1135 aaPredicted RBP18.66■□□□□ 0.58
ATF3-202ENST00000341491 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
ATF3-202ENST00000341491 NSD3Q9BZ95 1437 aa18.65■□□□□ 0.58
ATF3-202ENST00000341491 CDK19Q9BWU1 502 aa18.65■□□□□ 0.58
ATF3-202ENST00000341491 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
ATF3-202ENST00000341491 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
ATF3-202ENST00000341491 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
ATF3-202ENST00000341491 CPS1P31327 1500 aa18.65■□□□□ 0.58
ATF3-202ENST00000341491 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.58
ATF3-202ENST00000341491 MYT1Q01538 1121 aa18.64■□□□□ 0.58
ATF3-202ENST00000341491 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.64■□□□□ 0.58
ATF3-202ENST00000341491 MED14O60244 1454 aa18.64■□□□□ 0.57
ATF3-202ENST00000341491 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
ATF3-202ENST00000341491 RALBP1Q15311 655 aa18.62■□□□□ 0.57
ATF3-202ENST00000341491 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
ATF3-202ENST00000341491 RBM33Q96EV2 1170 aaKnown RBP18.61■□□□□ 0.57
ATF3-202ENST00000341491 A0A1W2PP64 1363 aa18.6■□□□□ 0.57
ATF3-202ENST00000341491 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
ATF3-202ENST00000341491 TECPR2O15040 1411 aa18.59■□□□□ 0.57
ATF3-202ENST00000341491 CD163L1Q9NR16 1453 aa18.58■□□□□ 0.56
ATF3-202ENST00000341491 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
ATF3-202ENST00000341491 CABP1Q9NZU7 370 aa18.57■□□□□ 0.56
ATF3-202ENST00000341491 PPP2R1AP30153 589 aa18.56■□□□□ 0.56
ATF3-202ENST00000341491 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
ATF3-202ENST00000341491 XRN1Q8IZH2 1706 aaKnown RBP18.55■□□□□ 0.56
ATF3-202ENST00000341491 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
ATF3-202ENST00000341491 KCNA6P17658 529 aa18.55■□□□□ 0.56
ATF3-202ENST00000341491 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
ATF3-202ENST00000341491 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
ATF3-202ENST00000341491 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
ATF3-202ENST00000341491 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
ATF3-202ENST00000341491 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
ATF3-202ENST00000341491 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
ATF3-202ENST00000341491 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
ATF3-202ENST00000341491 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
ATF3-202ENST00000341491 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
ATF3-202ENST00000341491 DIP2AQ14689 1571 aa18.53■□□□□ 0.56
ATF3-202ENST00000341491 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
ATF3-202ENST00000341491 HSPA2P54652 639 aa18.53■□□□□ 0.56
ATF3-202ENST00000341491 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
ATF3-202ENST00000341491 PPIP5K1Q6PFW1 1433 aa18.51■□□□□ 0.55
ATF3-202ENST00000341491 GGNBP2Q9H3C7 697 aa18.5■□□□□ 0.55
ATF3-202ENST00000341491 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
ATF3-202ENST00000341491 ATP7BP35670 1465 aa18.49■□□□□ 0.55
ATF3-202ENST00000341491 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
ATF3-202ENST00000341491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATF3-202ENST00000341491 NUDT16Q96DE0 195 aaKnown RBP18.49■□□□□ 0.55
ATF3-202ENST00000341491 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
ATF3-202ENST00000341491 NPHP4O75161 1426 aaPredicted RBP18.48■□□□□ 0.55
ATF3-202ENST00000341491 ADGRB2O60241 1585 aa18.48■□□□□ 0.55
ATF3-202ENST00000341491 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
ATF3-202ENST00000341491 NALCNQ8IZF0 1738 aa18.48■□□□□ 0.55
ATF3-202ENST00000341491 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
ATF3-202ENST00000341491 PUS7Q96PZ0 661 aaKnown RBP18.47■□□□□ 0.55
ATF3-202ENST00000341491 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
ATF3-202ENST00000341491 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
ATF3-202ENST00000341491 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
ATF3-202ENST00000341491 CGNL1Q0VF96 1302 aa18.46■□□□□ 0.55
ATF3-202ENST00000341491 FBLN1P23142 703 aa18.45■□□□□ 0.54
ATF3-202ENST00000341491 ZRANB1Q9UGI0 708 aa18.45■□□□□ 0.54
ATF3-202ENST00000341491 TOPAZ1Q8N9V7 1692 aa18.45■□□□□ 0.54
ATF3-202ENST00000341491 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
ATF3-202ENST00000341491 SIRT1Q96EB6 747 aa18.44■□□□□ 0.54
ATF3-202ENST00000341491 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
ATF3-202ENST00000341491 ANKRD26Q9UPS8 1709 aa18.44■□□□□ 0.54
ATF3-202ENST00000341491 CDC42BPGQ6DT37 1551 aa18.44■□□□□ 0.54
ATF3-202ENST00000341491 HDGFL2Q7Z4V5 671 aaPredicted RBP18.44■□□□□ 0.54
ATF3-202ENST00000341491 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
ATF3-202ENST00000341491 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
ATF3-202ENST00000341491 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
ATF3-202ENST00000341491 FYB1O15117 783 aa18.42■□□□□ 0.54
ATF3-202ENST00000341491 ADAMTS8Q9UP79 889 aa18.41■□□□□ 0.54
ATF3-202ENST00000341491 NME9Q86XW9 330 aa18.4■□□□□ 0.54
ATF3-202ENST00000341491 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
ATF3-202ENST00000341491 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
ATF3-202ENST00000341491 CCDC61Q9Y6R9 512 aa18.4■□□□□ 0.54
ATF3-202ENST00000341491 CCDC146Q8IYE0 955 aa18.39■□□□□ 0.53
ATF3-202ENST00000341491 CPSF1Q10570 1443 aaKnown RBP18.39■□□□□ 0.53
ATF3-202ENST00000341491 FMN2Q9NZ56 1722 aa18.38■□□□□ 0.53
ATF3-202ENST00000341491 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
ATF3-202ENST00000341491 MTHFSP49914 203 aa18.37■□□□□ 0.53
ATF3-202ENST00000341491 ACEP12821 1306 aa18.37■□□□□ 0.53
ATF3-202ENST00000341491 LMTK3Q96Q04 1460 aa18.36■□□□□ 0.53
ATF3-202ENST00000341491 PIK3R4Q99570 1358 aa18.36■□□□□ 0.53
ATF3-202ENST00000341491 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATF3-202ENST00000341491 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
ATF3-202ENST00000341491 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
ATF3-202ENST00000341491 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
ATF3-202ENST00000341491 C14orf37Q86TY3 774 aa18.34■□□□□ 0.53
ATF3-202ENST00000341491 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
ATF3-202ENST00000341491 NSD2O96028 1365 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms