RNA–Protein interactions for RNA: ENST00000341408.5

VCX-201, Transcript of variable charge X-linked, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX, Length 677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX-201ENST00000341408 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
VCX-201ENST00000341408 NBPF1Q3BBV0 1214 aa22.3■■□□□ 1.16
VCX-201ENST00000341408 METP08581 1390 aa22.29■■□□□ 1.16
VCX-201ENST00000341408 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
VCX-201ENST00000341408 AFF2P51816 1311 aa22.27■■□□□ 1.16
VCX-201ENST00000341408 TRPM1Q7Z4N2 1603 aa22.25■■□□□ 1.15
VCX-201ENST00000341408 STK26Q9P289 416 aa22.25■■□□□ 1.15
VCX-201ENST00000341408 LRRC59Q96AG4 307 aaKnown RBP22.24■■□□□ 1.15
VCX-201ENST00000341408 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
VCX-201ENST00000341408 LAMC1P11047 1609 aa22.24■■□□□ 1.15
VCX-201ENST00000341408 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
VCX-201ENST00000341408 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
VCX-201ENST00000341408 CDK12Q9NYV4 1490 aaPredicted RBP22.22■■□□□ 1.15
VCX-201ENST00000341408 ZEB1P37275 1124 aaPredicted RBP22.22■■□□□ 1.15
VCX-201ENST00000341408 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
VCX-201ENST00000341408 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
VCX-201ENST00000341408 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
VCX-201ENST00000341408 DCCP43146 1447 aa22.21■■□□□ 1.15
VCX-201ENST00000341408 RALGAPBQ86X10 1494 aa22.2■■□□□ 1.14
VCX-201ENST00000341408 ADGRB1O14514 1584 aa22.2■■□□□ 1.14
VCX-201ENST00000341408 RBM6P78332 1123 aaKnown RBP22.19■■□□□ 1.14
VCX-201ENST00000341408 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
VCX-201ENST00000341408 CARD11Q9BXL7 1154 aa22.18■■□□□ 1.14
VCX-201ENST00000341408 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
VCX-201ENST00000341408 LRPPRCP42704 1394 aaKnown RBP22.16■■□□□ 1.14
VCX-201ENST00000341408 NGLY1Q96IV0 654 aa22.15■■□□□ 1.14
VCX-201ENST00000341408 MST1RQ04912 1400 aa22.14■■□□□ 1.14
VCX-201ENST00000341408 DDX17Q92841 729 aaKnown RBP22.14■■□□□ 1.13
VCX-201ENST00000341408 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
VCX-201ENST00000341408 ABCC11Q96J66 1382 aa22.12■■□□□ 1.13
VCX-201ENST00000341408 ADAMTS2O95450 1211 aa22.12■■□□□ 1.13
VCX-201ENST00000341408 XRN1Q8IZH2 1706 aaKnown RBP22.11■■□□□ 1.13
VCX-201ENST00000341408 NHSL1Q5SYE7 1610 aa22.11■■□□□ 1.13
VCX-201ENST00000341408 WAPLQ7Z5K2 1190 aa22.11■■□□□ 1.13
VCX-201ENST00000341408 PNPLA6Q8IY17 1366 aa22.11■■□□□ 1.13
VCX-201ENST00000341408 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
VCX-201ENST00000341408 RGS12O14924 1447 aa22.1■■□□□ 1.13
VCX-201ENST00000341408 SAFB2Q14151 953 aaKnown RBP eCLIP22.09■■□□□ 1.13
VCX-201ENST00000341408 PRAM1Q96QH2 718 aa22.08■■□□□ 1.13
VCX-201ENST00000341408 POGKQ9P215 609 aa22.08■■□□□ 1.13
VCX-201ENST00000341408 PLEKHH1Q9ULM0 1364 aa22.08■■□□□ 1.12
VCX-201ENST00000341408 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
VCX-201ENST00000341408 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
VCX-201ENST00000341408 TECPR2O15040 1411 aa22.06■■□□□ 1.12
VCX-201ENST00000341408 USP21Q9UK80 565 aa22.05■■□□□ 1.12
VCX-201ENST00000341408 ARHGEF28Q8N1W1 1705 aaKnown RBP22.05■■□□□ 1.12
VCX-201ENST00000341408 ATAD2Q6PL18 1390 aa22.04■■□□□ 1.12
VCX-201ENST00000341408 SIRT1Q96EB6 747 aa22.04■■□□□ 1.12
VCX-201ENST00000341408 DLC1Q96QB1 1528 aa22.04■■□□□ 1.12
VCX-201ENST00000341408 PTCH1Q13635 1447 aa22.04■■□□□ 1.12
VCX-201ENST00000341408 USP47Q96K76 1375 aa22.03■■□□□ 1.12
VCX-201ENST00000341408 TRPC5Q9UL62 973 aaPredicted RBP22.02■■□□□ 1.12
VCX-201ENST00000341408 ST20-MTHFSA0A0A6YYL1 179 aa22.01■■□□□ 1.11
VCX-201ENST00000341408 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
VCX-201ENST00000341408 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
VCX-201ENST00000341408 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
VCX-201ENST00000341408 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
VCX-201ENST00000341408 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
VCX-201ENST00000341408 HSPA5P11021 654 aaKnown RBP22■■□□□ 1.11
VCX-201ENST00000341408 ORAI2Q96SN7 254 aa22■■□□□ 1.11
VCX-201ENST00000341408 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
VCX-201ENST00000341408 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
VCX-201ENST00000341408 EIF4G2P78344 907 aaKnown RBP eCLIP21.99■■□□□ 1.11
VCX-201ENST00000341408 NALCNQ8IZF0 1738 aa21.98■■□□□ 1.11
VCX-201ENST00000341408 SOS2Q07890 1332 aaPredicted RBP21.98■■□□□ 1.11
VCX-201ENST00000341408 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
VCX-201ENST00000341408 FNBP4Q8N3X1 1017 aaPredicted RBP21.96■■□□□ 1.11
VCX-201ENST00000341408 CCDC125Q86Z20 511 aa21.92■■□□□ 1.1
VCX-201ENST00000341408 TESK2Q96S53 571 aa21.91■■□□□ 1.1
VCX-201ENST00000341408 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
VCX-201ENST00000341408 ATRNO75882 1429 aa21.89■■□□□ 1.09
VCX-201ENST00000341408 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
VCX-201ENST00000341408 NPHP3Q7Z494 1330 aa21.87■■□□□ 1.09
VCX-201ENST00000341408 WASLO00401 505 aaPredicted RBP21.87■■□□□ 1.09
VCX-201ENST00000341408 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
VCX-201ENST00000341408 CABP2Q9NPB3 220 aa21.85■■□□□ 1.09
VCX-201ENST00000341408 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
VCX-201ENST00000341408 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
VCX-201ENST00000341408 FOXO3O43524 673 aa21.84■■□□□ 1.09
VCX-201ENST00000341408 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
VCX-201ENST00000341408 GJD4Q96KN9 370 aaPredicted RBP21.84■■□□□ 1.09
VCX-201ENST00000341408 SBNO2Q9Y2G9 1366 aa21.84■■□□□ 1.09
VCX-201ENST00000341408 ADGRB2O60241 1585 aa21.83■■□□□ 1.09
VCX-201ENST00000341408 TMF1P82094 1093 aa21.83■■□□□ 1.09
VCX-201ENST00000341408 XPCQ01831 940 aaPredicted RBP21.83■■□□□ 1.09
VCX-201ENST00000341408 COL22A1Q8NFW1 1626 aaPredicted RBP21.82■■□□□ 1.08
VCX-201ENST00000341408 CDC42BPGQ6DT37 1551 aa21.82■■□□□ 1.08
VCX-201ENST00000341408 EP400Q96L91 3159 aa21.81■■□□□ 1.08
VCX-201ENST00000341408 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
VCX-201ENST00000341408 POLR3GLQ9BT43 218 aa21.81■■□□□ 1.08
VCX-201ENST00000341408 BCL9LQ86UU0 1499 aa21.81■■□□□ 1.08
VCX-201ENST00000341408 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
VCX-201ENST00000341408 PRR36Q9H6K5 1346 aa21.79■■□□□ 1.08
VCX-201ENST00000341408 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
VCX-201ENST00000341408 NUDT16Q96DE0 195 aaKnown RBP21.78■■□□□ 1.08
VCX-201ENST00000341408 RGPD8O14715 1765 aaPredicted RBP21.76■■□□□ 1.07
VCX-201ENST00000341408 UNC5CLQ8IV45 518 aa21.76■■□□□ 1.07
VCX-201ENST00000341408 PXDNQ92626 1479 aa21.76■■□□□ 1.07
VCX-201ENST00000341408 MARF1Q9Y4F3 1742 aaKnown RBP21.75■■□□□ 1.07
VCX-201ENST00000341408 SF3B2Q13435 895 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms