RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 LAMC1P11047 1609 aa19.37■□□□□ 0.69
NECTIN1-203ENST00000341398 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
NECTIN1-203ENST00000341398 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
NECTIN1-203ENST00000341398 ADAMTS2O95450 1211 aa19.35■□□□□ 0.69
NECTIN1-203ENST00000341398 RBM6P78332 1123 aaKnown RBP19.35■□□□□ 0.69
NECTIN1-203ENST00000341398 SPATA31E1Q6ZUB1 1445 aa19.35■□□□□ 0.69
NECTIN1-203ENST00000341398 UPF1Q92900 1129 aaKnown RBP eCLIP19.34■□□□□ 0.692e-10■■■■■ 38.3
NECTIN1-203ENST00000341398 SRCAPQ6ZRS2 3230 aa19.34■□□□□ 0.69
NECTIN1-203ENST00000341398 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.68
NECTIN1-203ENST00000341398 IFT172Q9UG01 1749 aa19.33■□□□□ 0.68
NECTIN1-203ENST00000341398 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
NECTIN1-203ENST00000341398 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
NECTIN1-203ENST00000341398 TMEM132EQ6IEE7 984 aa19.32■□□□□ 0.68
NECTIN1-203ENST00000341398 CDC42BPGQ6DT37 1551 aa19.31■□□□□ 0.68
NECTIN1-203ENST00000341398 TECPR2O15040 1411 aa19.31■□□□□ 0.68
NECTIN1-203ENST00000341398 FOXO3O43524 673 aa19.3■□□□□ 0.68
NECTIN1-203ENST00000341398 USP21Q9UK80 565 aa19.3■□□□□ 0.68
NECTIN1-203ENST00000341398 SIRT1Q96EB6 747 aa19.29■□□□□ 0.68
NECTIN1-203ENST00000341398 PIK3C2GO75747 1445 aa19.28■□□□□ 0.68
NECTIN1-203ENST00000341398 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
NECTIN1-203ENST00000341398 TRPC5Q9UL62 973 aaPredicted RBP19.28■□□□□ 0.68
NECTIN1-203ENST00000341398 KNDC1Q76NI1 1749 aa19.27■□□□□ 0.68
NECTIN1-203ENST00000341398 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
NECTIN1-203ENST00000341398 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
NECTIN1-203ENST00000341398 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
NECTIN1-203ENST00000341398 FNBP4Q8N3X1 1017 aaPredicted RBP19.26■□□□□ 0.67
NECTIN1-203ENST00000341398 COL22A1Q8NFW1 1626 aaPredicted RBP19.25■□□□□ 0.67
NECTIN1-203ENST00000341398 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
NECTIN1-203ENST00000341398 PXDNQ92626 1479 aa19.22■□□□□ 0.67
NECTIN1-203ENST00000341398 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
NECTIN1-203ENST00000341398 RGS12O14924 1447 aa19.22■□□□□ 0.67
NECTIN1-203ENST00000341398 PSME1Q06323 249 aa19.21■□□□□ 0.67
NECTIN1-203ENST00000341398 CFAP70Q5T0N1 1121 aa19.21■□□□□ 0.67
NECTIN1-203ENST00000341398 FMN2Q9NZ56 1722 aa19.21■□□□□ 0.67
NECTIN1-203ENST00000341398 KRT28Q7Z3Y7 464 aa19.2■□□□□ 0.66
NECTIN1-203ENST00000341398 RAB3GAP2Q9H2M9 1393 aa19.2■□□□□ 0.66
NECTIN1-203ENST00000341398 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
NECTIN1-203ENST00000341398 MARF1Q9Y4F3 1742 aaKnown RBP19.2■□□□□ 0.66
NECTIN1-203ENST00000341398 MYOM2P54296 1465 aa19.2■□□□□ 0.66
NECTIN1-203ENST00000341398 POGKQ9P215 609 aa19.19■□□□□ 0.66
NECTIN1-203ENST00000341398 NRXN1Q9ULB1 1477 aa19.18■□□□□ 0.66
NECTIN1-203ENST00000341398 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
NECTIN1-203ENST00000341398 SPATA31A3Q5VYP0 1347 aa19.18■□□□□ 0.66
NECTIN1-203ENST00000341398 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
NECTIN1-203ENST00000341398 HAP1P54257 671 aaPredicted RBP19.17■□□□□ 0.66
NECTIN1-203ENST00000341398 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
NECTIN1-203ENST00000341398 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
NECTIN1-203ENST00000341398 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
NECTIN1-203ENST00000341398 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
NECTIN1-203ENST00000341398 ATRNO75882 1429 aa19.16■□□□□ 0.66
NECTIN1-203ENST00000341398 HRCP23327 699 aa19.14■□□□□ 0.65
NECTIN1-203ENST00000341398 GJD4Q96KN9 370 aaPredicted RBP19.14■□□□□ 0.65
NECTIN1-203ENST00000341398 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
NECTIN1-203ENST00000341398 BCL9LQ86UU0 1499 aa19.12■□□□□ 0.65
NECTIN1-203ENST00000341398 LMOD2Q6P5Q4 547 aa19.12■□□□□ 0.65
NECTIN1-203ENST00000341398 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
NECTIN1-203ENST00000341398 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
NECTIN1-203ENST00000341398 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
NECTIN1-203ENST00000341398 TRAK1Q9UPV9 953 aa19.11■□□□□ 0.65
NECTIN1-203ENST00000341398 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
NECTIN1-203ENST00000341398 TNS3Q68CZ2 1445 aa19.09■□□□□ 0.65
NECTIN1-203ENST00000341398 SBNO1A3KN83 1393 aa19.09■□□□□ 0.65
NECTIN1-203ENST00000341398 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
NECTIN1-203ENST00000341398 EIF3AQ14152 1382 aaKnown RBP19.09■□□□□ 0.65
NECTIN1-203ENST00000341398 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.09■□□□□ 0.65
NECTIN1-203ENST00000341398 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.65
NECTIN1-203ENST00000341398 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.65
NECTIN1-203ENST00000341398 SLIT2O94813 1529 aa19.06■□□□□ 0.64
NECTIN1-203ENST00000341398 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
NECTIN1-203ENST00000341398 USP32Q8NFA0 1604 aa19.05■□□□□ 0.64
NECTIN1-203ENST00000341398 GPRASP1Q5JY77 1395 aa19.05■□□□□ 0.64
NECTIN1-203ENST00000341398 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
NECTIN1-203ENST00000341398 CABLES1Q8TDN4 633 aa19.05■□□□□ 0.64
NECTIN1-203ENST00000341398 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
NECTIN1-203ENST00000341398 CCDC9Q9Y3X0 531 aaKnown RBP19.04■□□□□ 0.64
NECTIN1-203ENST00000341398 ADGRB1O14514 1584 aa19.04■□□□□ 0.64
NECTIN1-203ENST00000341398 ADGRB2O60241 1585 aa19.03■□□□□ 0.64
NECTIN1-203ENST00000341398 WASLO00401 505 aaPredicted RBP19.03■□□□□ 0.64
NECTIN1-203ENST00000341398 VPS72Q15906 364 aa19.02■□□□□ 0.64
NECTIN1-203ENST00000341398 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
NECTIN1-203ENST00000341398 RALGAPBQ86X10 1494 aa19.01■□□□□ 0.63
NECTIN1-203ENST00000341398 NGDNQ8NEJ9 315 aaKnown RBP19.01■□□□□ 0.63
NECTIN1-203ENST00000341398 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
NECTIN1-203ENST00000341398 FAM83GA6ND36 823 aa18.98■□□□□ 0.63
NECTIN1-203ENST00000341398 SF3B2Q13435 895 aaKnown RBP18.98■□□□□ 0.63
NECTIN1-203ENST00000341398 SEPT12Q8IYM1 358 aa18.98■□□□□ 0.63
NECTIN1-203ENST00000341398 TULP4Q9NRJ4 1543 aa18.98■□□□□ 0.63
NECTIN1-203ENST00000341398 GLI3P10071 1580 aa18.98■□□□□ 0.63
NECTIN1-203ENST00000341398 PLCH1Q4KWH8 1693 aa18.97■□□□□ 0.63
NECTIN1-203ENST00000341398 PAK3O75914 559 aaPredicted RBP18.97■□□□□ 0.63
NECTIN1-203ENST00000341398 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
NECTIN1-203ENST00000341398 ABCA3Q99758 1704 aa18.96■□□□□ 0.63
NECTIN1-203ENST00000341398 BRWD3Q6RI45 1802 aa18.96■□□□□ 0.62
NECTIN1-203ENST00000341398 EP400Q96L91 3159 aa18.95■□□□□ 0.62
NECTIN1-203ENST00000341398 ONECUT3O60422 494 aaPredicted RBP18.95■□□□□ 0.62
NECTIN1-203ENST00000341398 A0A0G2JS52 829 aa18.94■□□□□ 0.62
NECTIN1-203ENST00000341398 MYT1Q01538 1121 aa18.94■□□□□ 0.62
NECTIN1-203ENST00000341398 NUDT16Q96DE0 195 aaKnown RBP18.94■□□□□ 0.62
NECTIN1-203ENST00000341398 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
NECTIN1-203ENST00000341398 TRPM3Q9HCF6 1732 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms