RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
TRERF1-201ENST00000340840 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
TRERF1-201ENST00000340840 POGKQ9P215 609 aa11.87□□□□□ -0.51
TRERF1-201ENST00000340840 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
TRERF1-201ENST00000340840 WDR7Q9Y4E6 1490 aa11.86□□□□□ -0.51
TRERF1-201ENST00000340840 SLC12A5Q9H2X9 1139 aa11.86□□□□□ -0.51
TRERF1-201ENST00000340840 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
TRERF1-201ENST00000340840 E9PCH4 1651 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 CHD1O14646 1710 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 PTMSP20962 102 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 MAST1Q9Y2H9 1570 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRERF1-201ENST00000340840 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
TRERF1-201ENST00000340840 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-201ENST00000340840 POLR3AO14802 1390 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-201ENST00000340840 PLCH2O75038 1416 aa11.85□□□□□ -0.51
TRERF1-201ENST00000340840 ATP10AO60312 1499 aa11.84□□□□□ -0.51
TRERF1-201ENST00000340840 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
TRERF1-201ENST00000340840 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.52
TRERF1-201ENST00000340840 LAMC1P11047 1609 aa11.83□□□□□ -0.52
TRERF1-201ENST00000340840 ADGRF5Q8IZF2 1346 aa11.83□□□□□ -0.52
TRERF1-201ENST00000340840 PREX2Q70Z35 1606 aa11.83□□□□□ -0.52
TRERF1-201ENST00000340840 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
TRERF1-201ENST00000340840 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 MCM4P33991 863 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 CARD14Q9BXL6 1004 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 ASXL2Q76L83 1435 aa11.82□□□□□ -0.52
TRERF1-201ENST00000340840 SYNMO15061 1565 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 STK26Q9P289 416 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 UNC13BO14795 1591 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-201ENST00000340840 TRAK2O60296 914 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 SEC24BO95487 1268 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 HDGFL2Q7Z4V5 671 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-201ENST00000340840 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
TRERF1-201ENST00000340840 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
TRERF1-201ENST00000340840 MRE11P49959 708 aa11.8□□□□□ -0.52
TRERF1-201ENST00000340840 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
TRERF1-201ENST00000340840 EXOSC9Q06265 439 aaKnown RBP11.8□□□□□ -0.52
TRERF1-201ENST00000340840 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
TRERF1-201ENST00000340840 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
TRERF1-201ENST00000340840 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-201ENST00000340840 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
TRERF1-201ENST00000340840 SKOR2Q2VWA4 1001 aaPredicted RBP11.79□□□□□ -0.52
TRERF1-201ENST00000340840 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
TRERF1-201ENST00000340840 RIPK4P57078 832 aa11.79□□□□□ -0.52
TRERF1-201ENST00000340840 CCDC27Q2M243 656 aa11.79□□□□□ -0.52
TRERF1-201ENST00000340840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRERF1-201ENST00000340840 CASC1Q6TDU7 716 aa11.78□□□□□ -0.52
TRERF1-201ENST00000340840 LNPKQ9C0E8 428 aa11.78□□□□□ -0.52
TRERF1-201ENST00000340840 RLBP1P12271 317 aa11.78□□□□□ -0.52
TRERF1-201ENST00000340840 NCLP19338 710 aaKnown RBP11.78□□□□□ -0.52
TRERF1-201ENST00000340840 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-201ENST00000340840 LMOD2Q6P5Q4 547 aa11.78□□□□□ -0.52
TRERF1-201ENST00000340840 RTEL1-TNFRSF6BF6WH68 1400 aa11.77□□□□□ -0.52
TRERF1-201ENST00000340840 PLXNC1O60486 1568 aa11.77□□□□□ -0.52
TRERF1-201ENST00000340840 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.52
TRERF1-201ENST00000340840 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.53
TRERF1-201ENST00000340840 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.53
TRERF1-201ENST00000340840 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
TRERF1-201ENST00000340840 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
TRERF1-201ENST00000340840 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-201ENST00000340840 GGNBP2Q9H3C7 697 aa11.76□□□□□ -0.53
TRERF1-201ENST00000340840 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
TRERF1-201ENST00000340840 ZMYM3Q14202 1370 aa11.75□□□□□ -0.53
TRERF1-201ENST00000340840 RPGRIP1LQ68CZ1 1315 aa11.75□□□□□ -0.53
TRERF1-201ENST00000340840 TTC37Q6PGP7 1564 aa11.75□□□□□ -0.53
TRERF1-201ENST00000340840 POGZQ7Z3K3 1410 aa11.75□□□□□ -0.53
TRERF1-201ENST00000340840 NOB1Q9ULX3 412 aaKnown RBP11.75□□□□□ -0.53
TRERF1-201ENST00000340840 KDM5AP29375 1690 aaKnown RBP11.75□□□□□ -0.53
TRERF1-201ENST00000340840 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
TRERF1-201ENST00000340840 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 CDC42BPBQ9Y5S2 1711 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 NOS1P29475 1434 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 TRPM2O94759 1503 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
TRERF1-201ENST00000340840 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 NSD2O96028 1365 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 FOXD4L1Q9NU39 408 aa11.74□□□□□ -0.53
TRERF1-201ENST00000340840 C14orf93Q9H972 538 aaKnown RBP11.74□□□□□ -0.53
TRERF1-201ENST00000340840 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
TRERF1-201ENST00000340840 HDAC1Q13547 482 aaPredicted RBP11.73□□□□□ -0.53
TRERF1-201ENST00000340840 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
TRERF1-201ENST00000340840 TRIM27P14373 513 aa11.73□□□□□ -0.53
TRERF1-201ENST00000340840 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
TRERF1-201ENST00000340840 USP19O94966 1318 aa11.73□□□□□ -0.53
TRERF1-201ENST00000340840 PTPRTO14522 1441 aa11.72□□□□□ -0.53
TRERF1-201ENST00000340840 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
TRERF1-201ENST00000340840 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
TRERF1-201ENST00000340840 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
TRERF1-201ENST00000340840 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
TRERF1-201ENST00000340840 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
TRERF1-201ENST00000340840 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms