RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 NEURL4Q96JN8 1562 aa21.9■■□□□ 1.1
CDK11B-201ENST00000340677 CEP152O94986 1710 aa21.89■■□□□ 1.1
CDK11B-201ENST00000340677 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
CDK11B-201ENST00000340677 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
CDK11B-201ENST00000340677 UHRF1BP1Q6BDS2 1440 aa21.88■■□□□ 1.09
CDK11B-201ENST00000340677 SOX12O15370 315 aa21.87■■□□□ 1.09
CDK11B-201ENST00000340677 AGLP35573 1532 aa21.86■■□□□ 1.09
CDK11B-201ENST00000340677 APPP05067 770 aa21.85■■□□□ 1.09
CDK11B-201ENST00000340677 PLCD4Q9BRC7 762 aa21.85■■□□□ 1.09
CDK11B-201ENST00000340677 ZNF622Q969S3 477 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■■■□□ 18.5
CDK11B-201ENST00000340677 DNTTIP2Q5QJE6 756 aaKnown RBP21.84■■□□□ 1.09
CDK11B-201ENST00000340677 YEATS2Q9ULM3 1422 aa21.84■■□□□ 1.09
CDK11B-201ENST00000340677 CERS3Q8IU89 383 aa21.83■■□□□ 1.09
CDK11B-201ENST00000340677 NGEFQ8N5V2 710 aa21.82■■□□□ 1.08
CDK11B-201ENST00000340677 CLSTN1O94985 981 aa21.82■■□□□ 1.08
CDK11B-201ENST00000340677 MAP7D2Q96T17 732 aa21.82■■□□□ 1.08
CDK11B-201ENST00000340677 ABCC3O15438 1527 aa21.82■■□□□ 1.08
CDK11B-201ENST00000340677 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
CDK11B-201ENST00000340677 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
CDK11B-201ENST00000340677 HIRIP3Q9BW71 556 aaPredicted RBP21.81■■□□□ 1.08
CDK11B-201ENST00000340677 CLTCL1P53675 1640 aa21.79■■□□□ 1.08
CDK11B-201ENST00000340677 ZBTB22O15209 634 aa21.79■■□□□ 1.08
CDK11B-201ENST00000340677 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.08
CDK11B-201ENST00000340677 KIF20AO95235 890 aa21.77■■□□□ 1.08
CDK11B-201ENST00000340677 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.08
CDK11B-201ENST00000340677 SPATA31E1Q6ZUB1 1445 aa21.77■■□□□ 1.08
CDK11B-201ENST00000340677 KIF1BO60333 1816 aa21.77■■□□□ 1.07
CDK11B-201ENST00000340677 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
CDK11B-201ENST00000340677 ZSCAN20P17040 1043 aaPredicted RBP21.76■■□□□ 1.07
CDK11B-201ENST00000340677 MCCP23508 829 aa21.76■■□□□ 1.07
CDK11B-201ENST00000340677 COL17A1Q9UMD9 1497 aaPredicted RBP21.75■■□□□ 1.07
CDK11B-201ENST00000340677 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
CDK11B-201ENST00000340677 AXDND1Q5T1B0 1012 aaPredicted RBP21.73■■□□□ 1.07
CDK11B-201ENST00000340677 POLR1AO95602 1720 aaPredicted RBP21.73■■□□□ 1.07
CDK11B-201ENST00000340677 LAMC1P11047 1609 aa21.72■■□□□ 1.07
CDK11B-201ENST00000340677 KDM4FA0A1W2PPD8 638 aa21.72■■□□□ 1.07
CDK11B-201ENST00000340677 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
CDK11B-201ENST00000340677 TRPM1Q7Z4N2 1603 aa21.72■■□□□ 1.07
CDK11B-201ENST00000340677 NPATQ14207 1427 aa21.71■■□□□ 1.07
CDK11B-201ENST00000340677 AEBP1Q8IUX7 1158 aa21.7■■□□□ 1.06
CDK11B-201ENST00000340677 PRAG1Q86YV5 1406 aa21.69■■□□□ 1.06
CDK11B-201ENST00000340677 EIF4G2P78344 907 aaKnown RBP eCLIP21.68■■□□□ 1.06
CDK11B-201ENST00000340677 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
CDK11B-201ENST00000340677 NOS1P29475 1434 aa21.68■■□□□ 1.06
CDK11B-201ENST00000340677 IFT172Q9UG01 1749 aa21.68■■□□□ 1.06
CDK11B-201ENST00000340677 PHF14O94880 888 aa21.67■■□□□ 1.06
CDK11B-201ENST00000340677 GGT6Q6P531 493 aa21.67■■□□□ 1.06
CDK11B-201ENST00000340677 SIGLEC1Q9BZZ2 1709 aa21.67■■□□□ 1.06
CDK11B-201ENST00000340677 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
CDK11B-201ENST00000340677 L1TD1Q5T7N2 865 aaKnown RBP21.66■■□□□ 1.06
CDK11B-201ENST00000340677 RIPK4P57078 832 aa21.66■■□□□ 1.06
CDK11B-201ENST00000340677 KIAA1210Q9ULL0 1709 aa21.65■■□□□ 1.06
CDK11B-201ENST00000340677 ADGRB3O60242 1522 aa21.64■■□□□ 1.06
CDK11B-201ENST00000340677 HMGB1P09429 215 aaKnown RBP21.64■■□□□ 1.06
CDK11B-201ENST00000340677 PTMSP20962 102 aa21.64■■□□□ 1.06
CDK11B-201ENST00000340677 TAF3Q5VWG9 929 aa21.64■■□□□ 1.06
CDK11B-201ENST00000340677 MADDQ8WXG6 1647 aa21.64■■□□□ 1.05
CDK11B-201ENST00000340677 PREX1Q8TCU6 1659 aa21.64■■□□□ 1.05
CDK11B-201ENST00000340677 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
CDK11B-201ENST00000340677 LETM1O95202 739 aaPredicted RBP21.62■■□□□ 1.05
CDK11B-201ENST00000340677 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
CDK11B-201ENST00000340677 CFAP65Q6ZU64 1925 aaKnown RBP21.62■■□□□ 1.05
CDK11B-201ENST00000340677 MYOM2P54296 1465 aa21.61■■□□□ 1.05
CDK11B-201ENST00000340677 MROH2AA6NES4 1674 aa21.61■■□□□ 1.05
CDK11B-201ENST00000340677 SYNMO15061 1565 aa21.61■■□□□ 1.05
CDK11B-201ENST00000340677 KIAA1211Q6ZU35 1233 aa21.61■■□□□ 1.05
CDK11B-201ENST00000340677 GTPBP4Q9BZE4 634 aaKnown RBP21.6■■□□□ 1.05
CDK11B-201ENST00000340677 FAM13BQ9NYF5 915 aa21.6■■□□□ 1.05
CDK11B-201ENST00000340677 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
CDK11B-201ENST00000340677 OS9Q13438 667 aaPredicted RBP21.59■■□□□ 1.05
CDK11B-201ENST00000340677 UGGT1Q9NYU2 1555 aa21.59■■□□□ 1.05
CDK11B-201ENST00000340677 ANP32CO43423 234 aa21.59■■□□□ 1.05
CDK11B-201ENST00000340677 PRR29P0C7W0 189 aa21.59■■□□□ 1.05
CDK11B-201ENST00000340677 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
CDK11B-201ENST00000340677 PUS7Q96PZ0 661 aaKnown RBP21.58■■□□□ 1.05
CDK11B-201ENST00000340677 PRDM16Q9HAZ2 1276 aa21.58■■□□□ 1.05
CDK11B-201ENST00000340677 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.04
CDK11B-201ENST00000340677 FRAT2O75474 233 aaPredicted RBP21.58■■□□□ 1.04
CDK11B-201ENST00000340677 SLC20A2Q08357 652 aa21.58■■□□□ 1.04
CDK11B-201ENST00000340677 PPLO60437 1756 aa21.57■■□□□ 1.04
CDK11B-201ENST00000340677 RGL3Q3MIN7 710 aa21.56■■□□□ 1.04
CDK11B-201ENST00000340677 ARID3AQ99856 593 aa21.56■■□□□ 1.04
CDK11B-201ENST00000340677 USP47Q96K76 1375 aa21.56■■□□□ 1.04
CDK11B-201ENST00000340677 PSMD1Q99460 953 aa21.56■■□□□ 1.04
CDK11B-201ENST00000340677 IRX5P78411 483 aaPredicted RBP21.55■■□□□ 1.04
CDK11B-201ENST00000340677 EGFL6Q8IUX8 553 aa21.55■■□□□ 1.04
CDK11B-201ENST00000340677 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
CDK11B-201ENST00000340677 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
CDK11B-201ENST00000340677 ESPNB1AK53 854 aa21.53■■□□□ 1.04
CDK11B-201ENST00000340677 ROCK2O75116 1388 aaKnown RBP21.52■■□□□ 1.04
CDK11B-201ENST00000340677 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
CDK11B-201ENST00000340677 CCER2I3L3R5 266 aa21.52■■□□□ 1.04
CDK11B-201ENST00000340677 RALBP1Q15311 655 aa21.52■■□□□ 1.04
CDK11B-201ENST00000340677 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.04
CDK11B-201ENST00000340677 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
CDK11B-201ENST00000340677 CGNQ9P2M7 1197 aaKnown RBP21.51■■□□□ 1.03
CDK11B-201ENST00000340677 MTERF4Q7Z6M4 381 aaKnown RBP21.51■■□□□ 1.03
CDK11B-201ENST00000340677 ILDR1Q86SU0 546 aaPredicted RBP21.51■■□□□ 1.03
CDK11B-201ENST00000340677 ZBTB9Q96C00 473 aa21.51■■□□□ 1.03
CDK11B-201ENST00000340677 IQGAP1P46940 1657 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms