RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TESK2Q96S53 571 aa20.89■□□□□ 0.94
TUBB4B-201ENST00000340384 RBM33Q96EV2 1170 aaKnown RBP20.89■□□□□ 0.93
TUBB4B-201ENST00000340384 PTCH1Q13635 1447 aa20.89■□□□□ 0.93
TUBB4B-201ENST00000340384 GTF3C3Q9Y5Q9 886 aa20.88■□□□□ 0.93
TUBB4B-201ENST00000340384 FAM135BQ49AJ0 1406 aa20.88■□□□□ 0.93
TUBB4B-201ENST00000340384 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
TUBB4B-201ENST00000340384 CENPJQ9HC77 1338 aaPredicted RBP20.86■□□□□ 0.93
TUBB4B-201ENST00000340384 POGKQ9P215 609 aa20.83■□□□□ 0.93
TUBB4B-201ENST00000340384 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.93
TUBB4B-201ENST00000340384 NKTRP30414 1462 aaKnown RBP20.83■□□□□ 0.92
TUBB4B-201ENST00000340384 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.82■□□□□ 0.92
TUBB4B-201ENST00000340384 PROSER2Q86WR7 435 aaPredicted RBP20.82■□□□□ 0.92
TUBB4B-201ENST00000340384 PRKRIP1Q9H875 184 aaPredicted RBP20.82■□□□□ 0.92
TUBB4B-201ENST00000340384 LTBP4Q8N2S1 1624 aa20.81■□□□□ 0.92
TUBB4B-201ENST00000340384 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
TUBB4B-201ENST00000340384 SBNO2Q9Y2G9 1366 aa20.8■□□□□ 0.92
TUBB4B-201ENST00000340384 TMEM94Q12767 1356 aa20.79■□□□□ 0.92
TUBB4B-201ENST00000340384 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
TUBB4B-201ENST00000340384 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
TUBB4B-201ENST00000340384 QRICH2Q9H0J4 1663 aa20.79■□□□□ 0.92
TUBB4B-201ENST00000340384 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
TUBB4B-201ENST00000340384 TULP4Q9NRJ4 1543 aa20.76■□□□□ 0.91
TUBB4B-201ENST00000340384 XIRP1Q702N8 1843 aaKnown RBP20.75■□□□□ 0.91
TUBB4B-201ENST00000340384 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
TUBB4B-201ENST00000340384 TMF1P82094 1093 aa20.74■□□□□ 0.91
TUBB4B-201ENST00000340384 NALCNQ8IZF0 1738 aa20.73■□□□□ 0.91
TUBB4B-201ENST00000340384 ADGRL3Q9HAR2 1447 aa20.73■□□□□ 0.91
TUBB4B-201ENST00000340384 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
TUBB4B-201ENST00000340384 NCOA3Q9Y6Q9 1424 aa20.72■□□□□ 0.91
TUBB4B-201ENST00000340384 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
TUBB4B-201ENST00000340384 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
TUBB4B-201ENST00000340384 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
TUBB4B-201ENST00000340384 CABP2Q9NPB3 220 aa20.7■□□□□ 0.9
TUBB4B-201ENST00000340384 CDCA8Q53HL2 280 aa20.69■□□□□ 0.9
TUBB4B-201ENST00000340384 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
TUBB4B-201ENST00000340384 EVC2Q86UK5 1308 aa20.68■□□□□ 0.9
TUBB4B-201ENST00000340384 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
TUBB4B-201ENST00000340384 MRS2Q9HD23 443 aa20.67■□□□□ 0.9
TUBB4B-201ENST00000340384 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
TUBB4B-201ENST00000340384 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
TUBB4B-201ENST00000340384 CDC42BPGQ6DT37 1551 aa20.65■□□□□ 0.9
TUBB4B-201ENST00000340384 RALBP1Q15311 655 aa20.64■□□□□ 0.9
TUBB4B-201ENST00000340384 SRPK2P78362 688 aaKnown RBP20.64■□□□□ 0.89
TUBB4B-201ENST00000340384 PUS7Q96PZ0 661 aaKnown RBP20.64■□□□□ 0.89
TUBB4B-201ENST00000340384 USP32Q8NFA0 1604 aa20.63■□□□□ 0.89
TUBB4B-201ENST00000340384 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
TUBB4B-201ENST00000340384 MSH6P52701 1360 aa20.62■□□□□ 0.89
TUBB4B-201ENST00000340384 ATP7BP35670 1465 aa20.62■□□□□ 0.89
TUBB4B-201ENST00000340384 DCCP43146 1447 aa20.61■□□□□ 0.89
TUBB4B-201ENST00000340384 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
TUBB4B-201ENST00000340384 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
TUBB4B-201ENST00000340384 MST1RQ04912 1400 aa20.59■□□□□ 0.89
TUBB4B-201ENST00000340384 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
TUBB4B-201ENST00000340384 ATF3P18847 181 aa20.58■□□□□ 0.89
TUBB4B-201ENST00000340384 CADPS2Q86UW7 1296 aa20.58■□□□□ 0.89
TUBB4B-201ENST00000340384 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
TUBB4B-201ENST00000340384 CABP1Q9NZU7 370 aa20.57■□□□□ 0.88
TUBB4B-201ENST00000340384 CCDC61Q9Y6R9 512 aa20.57■□□□□ 0.88
TUBB4B-201ENST00000340384 CERKQ8TCT0 537 aa20.56■□□□□ 0.88
TUBB4B-201ENST00000340384 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
TUBB4B-201ENST00000340384 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
TUBB4B-201ENST00000340384 ORAI2Q96SN7 254 aa20.56■□□□□ 0.88
TUBB4B-201ENST00000340384 RGPD8O14715 1765 aaPredicted RBP20.55■□□□□ 0.88
TUBB4B-201ENST00000340384 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
TUBB4B-201ENST00000340384 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
TUBB4B-201ENST00000340384 MYOM1P52179 1685 aa20.55■□□□□ 0.88
TUBB4B-201ENST00000340384 CCDC184Q52MB2 194 aa20.54■□□□□ 0.88
TUBB4B-201ENST00000340384 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
TUBB4B-201ENST00000340384 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
TUBB4B-201ENST00000340384 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
TUBB4B-201ENST00000340384 TOPAZ1Q8N9V7 1692 aa20.53■□□□□ 0.88
TUBB4B-201ENST00000340384 PARD3Q8TEW0 1356 aa20.53■□□□□ 0.88
TUBB4B-201ENST00000340384 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
TUBB4B-201ENST00000340384 PLEKHG3A1L390 1219 aa20.53■□□□□ 0.88
TUBB4B-201ENST00000340384 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
TUBB4B-201ENST00000340384 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
TUBB4B-201ENST00000340384 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
TUBB4B-201ENST00000340384 PMFBP1Q8TBY8 1022 aa20.51■□□□□ 0.87
TUBB4B-201ENST00000340384 PANK3Q9H999 370 aa20.5■□□□□ 0.87
TUBB4B-201ENST00000340384 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
TUBB4B-201ENST00000340384 CARD14Q9BXL6 1004 aa20.49■□□□□ 0.87
TUBB4B-201ENST00000340384 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
TUBB4B-201ENST00000340384 CPSF1Q10570 1443 aaKnown RBP20.49■□□□□ 0.87
TUBB4B-201ENST00000340384 ZBED9Q6R2W3 1325 aa20.48■□□□□ 0.87
TUBB4B-201ENST00000340384 BRINP3Q76B58 766 aa20.48■□□□□ 0.87
TUBB4B-201ENST00000340384 NLRP13Q86W25 1043 aa20.48■□□□□ 0.87
TUBB4B-201ENST00000340384 ACEP12821 1306 aa20.48■□□□□ 0.87
TUBB4B-201ENST00000340384 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
TUBB4B-201ENST00000340384 POLR3AO14802 1390 aaPredicted RBP20.47■□□□□ 0.87
TUBB4B-201ENST00000340384 NINLQ9Y2I6 1382 aa20.47■□□□□ 0.87
TUBB4B-201ENST00000340384 NEFLP07196 543 aa20.46■□□□□ 0.87
TUBB4B-201ENST00000340384 CNGB1Q14028 1251 aaPredicted RBP20.46■□□□□ 0.87
TUBB4B-201ENST00000340384 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.87
TUBB4B-201ENST00000340384 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.87
TUBB4B-201ENST00000340384 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
TUBB4B-201ENST00000340384 FOXO3O43524 673 aa20.44■□□□□ 0.86
TUBB4B-201ENST00000340384 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
TUBB4B-201ENST00000340384 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
TUBB4B-201ENST00000340384 UBAP1LF5GYI3 381 aa20.42■□□□□ 0.86
TUBB4B-201ENST00000340384 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms