RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
CSRP1-201ENST00000340006 PTCH1Q13635 1447 aa20.54■□□□□ 0.88
CSRP1-201ENST00000340006 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
CSRP1-201ENST00000340006 STRCP1A6NGW2 1772 aa20.52■□□□□ 0.88
CSRP1-201ENST00000340006 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
CSRP1-201ENST00000340006 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
CSRP1-201ENST00000340006 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
CSRP1-201ENST00000340006 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
CSRP1-201ENST00000340006 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
CSRP1-201ENST00000340006 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
CSRP1-201ENST00000340006 DISP3Q9P2K9 1392 aa20.48■□□□□ 0.87
CSRP1-201ENST00000340006 CABP2Q9NPB3 220 aa20.48■□□□□ 0.87
CSRP1-201ENST00000340006 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.48■□□□□ 0.87
CSRP1-201ENST00000340006 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
CSRP1-201ENST00000340006 KIF7Q2M1P5 1343 aa20.47■□□□□ 0.87
CSRP1-201ENST00000340006 WASHC2AQ641Q2 1341 aa20.47■□□□□ 0.87
CSRP1-201ENST00000340006 TMEM94Q12767 1356 aa20.47■□□□□ 0.87
CSRP1-201ENST00000340006 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
CSRP1-201ENST00000340006 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
CSRP1-201ENST00000340006 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
CSRP1-201ENST00000340006 TMC1Q8TDI8 760 aa20.43■□□□□ 0.86
CSRP1-201ENST00000340006 ATF3P18847 181 aa20.43■□□□□ 0.86
CSRP1-201ENST00000340006 DDX10Q13206 875 aaKnown RBP20.43■□□□□ 0.86
CSRP1-201ENST00000340006 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
CSRP1-201ENST00000340006 DIEXFQ68CQ4 756 aaKnown RBP20.41■□□□□ 0.86
CSRP1-201ENST00000340006 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
CSRP1-201ENST00000340006 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
CSRP1-201ENST00000340006 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
CSRP1-201ENST00000340006 NUDT16Q96DE0 195 aaKnown RBP20.4■□□□□ 0.86
CSRP1-201ENST00000340006 ADGRL3Q9HAR2 1447 aa20.4■□□□□ 0.86
CSRP1-201ENST00000340006 MSH6P52701 1360 aa20.4■□□□□ 0.86
CSRP1-201ENST00000340006 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.86
CSRP1-201ENST00000340006 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
CSRP1-201ENST00000340006 CADPS2Q86UW7 1296 aa20.37■□□□□ 0.85
CSRP1-201ENST00000340006 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
CSRP1-201ENST00000340006 CABP1Q9NZU7 370 aa20.36■□□□□ 0.85
CSRP1-201ENST00000340006 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
CSRP1-201ENST00000340006 ADGRB2O60241 1585 aa20.36■□□□□ 0.85
CSRP1-201ENST00000340006 ATAD2Q6PL18 1390 aa20.36■□□□□ 0.85
CSRP1-201ENST00000340006 LTBP4Q8N2S1 1624 aa20.34■□□□□ 0.85
CSRP1-201ENST00000340006 RGPD8O14715 1765 aaPredicted RBP20.33■□□□□ 0.84
CSRP1-201ENST00000340006 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.84
CSRP1-201ENST00000340006 PANK3Q9H999 370 aa20.32■□□□□ 0.84
CSRP1-201ENST00000340006 PRR36Q9H6K5 1346 aa20.32■□□□□ 0.84
CSRP1-201ENST00000340006 CDC42BPGQ6DT37 1551 aa20.31■□□□□ 0.84
CSRP1-201ENST00000340006 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
CSRP1-201ENST00000340006 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
CSRP1-201ENST00000340006 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
CSRP1-201ENST00000340006 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
CSRP1-201ENST00000340006 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
CSRP1-201ENST00000340006 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
CSRP1-201ENST00000340006 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
CSRP1-201ENST00000340006 DCCP43146 1447 aa20.28■□□□□ 0.84
CSRP1-201ENST00000340006 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
CSRP1-201ENST00000340006 NINLQ9Y2I6 1382 aa20.27■□□□□ 0.84
CSRP1-201ENST00000340006 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
CSRP1-201ENST00000340006 ATP7BP35670 1465 aa20.27■□□□□ 0.84
CSRP1-201ENST00000340006 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
CSRP1-201ENST00000340006 PLEKHG3A1L390 1219 aa20.26■□□□□ 0.83
CSRP1-201ENST00000340006 ACEP12821 1306 aa20.25■□□□□ 0.83
CSRP1-201ENST00000340006 USP32Q8NFA0 1604 aa20.25■□□□□ 0.83
CSRP1-201ENST00000340006 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
CSRP1-201ENST00000340006 CNGB1Q14028 1251 aaPredicted RBP20.25■□□□□ 0.83
CSRP1-201ENST00000340006 CERKQ8TCT0 537 aa20.25■□□□□ 0.83
CSRP1-201ENST00000340006 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
CSRP1-201ENST00000340006 MYOM1P52179 1685 aa20.24■□□□□ 0.83
CSRP1-201ENST00000340006 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
CSRP1-201ENST00000340006 C1orf167Q5SNV9 1468 aa20.23■□□□□ 0.83
CSRP1-201ENST00000340006 MST1RQ04912 1400 aa20.23■□□□□ 0.83
CSRP1-201ENST00000340006 TOM1O60784 492 aa20.23■□□□□ 0.83
CSRP1-201ENST00000340006 PSME1Q06323 249 aa20.23■□□□□ 0.83
CSRP1-201ENST00000340006 FOXO3O43524 673 aa20.22■□□□□ 0.83
CSRP1-201ENST00000340006 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
CSRP1-201ENST00000340006 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
CSRP1-201ENST00000340006 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
CSRP1-201ENST00000340006 A0A1W2PP64 1363 aa20.2■□□□□ 0.82
CSRP1-201ENST00000340006 UBAP1LF5GYI3 381 aa20.19■□□□□ 0.82
CSRP1-201ENST00000340006 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
CSRP1-201ENST00000340006 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
CSRP1-201ENST00000340006 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
CSRP1-201ENST00000340006 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
CSRP1-201ENST00000340006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
CSRP1-201ENST00000340006 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
CSRP1-201ENST00000340006 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
CSRP1-201ENST00000340006 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
CSRP1-201ENST00000340006 CPSF1Q10570 1443 aaKnown RBP20.16■□□□□ 0.82
CSRP1-201ENST00000340006 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
CSRP1-201ENST00000340006 XPCQ01831 940 aaPredicted RBP20.15■□□□□ 0.82
CSRP1-201ENST00000340006 DDX17Q92841 729 aaKnown RBP20.15■□□□□ 0.82
CSRP1-201ENST00000340006 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
CSRP1-201ENST00000340006 KRT28Q7Z3Y7 464 aa20.15■□□□□ 0.82
CSRP1-201ENST00000340006 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.81
CSRP1-201ENST00000340006 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
CSRP1-201ENST00000340006 CGNL1Q0VF96 1302 aa20.13■□□□□ 0.81
CSRP1-201ENST00000340006 ANP32CO43423 234 aa20.12■□□□□ 0.81
CSRP1-201ENST00000340006 NPHP3Q7Z494 1330 aa20.12■□□□□ 0.81
CSRP1-201ENST00000340006 KIF1AQ12756 1690 aa20.12■□□□□ 0.81
CSRP1-201ENST00000340006 IQSEC2Q5JU85 1478 aa20.12■□□□□ 0.81
CSRP1-201ENST00000340006 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
CSRP1-201ENST00000340006 MIER1Q8N108 512 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms