RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 KNSTRNQ9Y448 316 aa21.72■■□□□ 1.07
LITAF-201ENST00000339430 RRP1P56182 461 aaKnown RBP21.71■■□□□ 1.07
LITAF-201ENST00000339430 STK26Q9P289 416 aa21.71■■□□□ 1.07
LITAF-201ENST00000339430 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
LITAF-201ENST00000339430 EID1Q9Y6B2 187 aa21.69■■□□□ 1.06
LITAF-201ENST00000339430 NRXN3Q9Y4C0 1643 aa21.69■■□□□ 1.06
LITAF-201ENST00000339430 SLIT1O75093 1534 aa21.69■■□□□ 1.06
LITAF-201ENST00000339430 CENPJQ9HC77 1338 aaPredicted RBP21.68■■□□□ 1.06
LITAF-201ENST00000339430 ARHGAP23Q9P227 1491 aa21.68■■□□□ 1.06
LITAF-201ENST00000339430 BLMP54132 1417 aaPredicted RBP21.68■■□□□ 1.06
LITAF-201ENST00000339430 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
LITAF-201ENST00000339430 PDE3BQ13370 1112 aa21.67■■□□□ 1.06
LITAF-201ENST00000339430 YTHDC2Q9H6S0 1430 aaKnown RBP21.66■■□□□ 1.06
LITAF-201ENST00000339430 SETD1AO15047 1707 aaKnown RBP21.66■■□□□ 1.06
LITAF-201ENST00000339430 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
LITAF-201ENST00000339430 PPP2R1AP30153 589 aa21.65■■□□□ 1.06
LITAF-201ENST00000339430 EXOC6Q8TAG9 804 aa21.65■■□□□ 1.06
LITAF-201ENST00000339430 ADAMTS8Q9UP79 889 aa21.65■■□□□ 1.06
LITAF-201ENST00000339430 MYOM1P52179 1685 aa21.65■■□□□ 1.06
LITAF-201ENST00000339430 AMER1Q5JTC6 1135 aaPredicted RBP21.65■■□□□ 1.06
LITAF-201ENST00000339430 ARHGEF28Q8N1W1 1705 aaKnown RBP21.65■■□□□ 1.06
LITAF-201ENST00000339430 PLEKHG1Q9ULL1 1385 aa21.64■■□□□ 1.06
LITAF-201ENST00000339430 METP08581 1390 aa21.63■■□□□ 1.05
LITAF-201ENST00000339430 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
LITAF-201ENST00000339430 QRICH2Q9H0J4 1663 aa21.62■■□□□ 1.05
LITAF-201ENST00000339430 SAFB2Q14151 953 aaKnown RBP eCLIP21.61■■□□□ 1.05
LITAF-201ENST00000339430 ADAMTS13Q76LX8 1427 aa21.61■■□□□ 1.05
LITAF-201ENST00000339430 SBNO2Q9Y2G9 1366 aa21.61■■□□□ 1.05
LITAF-201ENST00000339430 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
LITAF-201ENST00000339430 SLC26A8Q96RN1 970 aa21.6■■□□□ 1.05
LITAF-201ENST00000339430 WDR43Q15061 677 aaKnown RBP eCLIP21.59■■□□□ 1.05
LITAF-201ENST00000339430 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
LITAF-201ENST00000339430 INSRP06213 1382 aa21.58■■□□□ 1.05
LITAF-201ENST00000339430 PLIN1O60240 522 aa21.58■■□□□ 1.05
LITAF-201ENST00000339430 KDM4FA0A1W2PPD8 638 aa21.58■■□□□ 1.04
LITAF-201ENST00000339430 POGKQ9P215 609 aa21.58■■□□□ 1.04
LITAF-201ENST00000339430 ERICH6Q7L0X2 663 aa21.56■■□□□ 1.04
LITAF-201ENST00000339430 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
LITAF-201ENST00000339430 ABCC11Q96J66 1382 aa21.55■■□□□ 1.04
LITAF-201ENST00000339430 MED14O60244 1454 aa21.55■■□□□ 1.04
LITAF-201ENST00000339430 WAPLQ7Z5K2 1190 aa21.54■■□□□ 1.04
LITAF-201ENST00000339430 DLC1Q96QB1 1528 aa21.53■■□□□ 1.04
LITAF-201ENST00000339430 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.04
LITAF-201ENST00000339430 PLEKHH1Q9ULM0 1364 aa21.52■■□□□ 1.04
LITAF-201ENST00000339430 TBX22Q9Y458 520 aa21.52■■□□□ 1.04
LITAF-201ENST00000339430 EVC2Q86UK5 1308 aa21.51■■□□□ 1.03
LITAF-201ENST00000339430 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
LITAF-201ENST00000339430 CARD14Q9BXL6 1004 aa21.5■■□□□ 1.03
LITAF-201ENST00000339430 TULP4Q9NRJ4 1543 aa21.49■■□□□ 1.03
LITAF-201ENST00000339430 TECPR2O15040 1411 aa21.48■■□□□ 1.03
LITAF-201ENST00000339430 PTPRUQ92729 1446 aa21.47■■□□□ 1.03
LITAF-201ENST00000339430 KNDC1Q76NI1 1749 aa21.47■■□□□ 1.03
LITAF-201ENST00000339430 NPC1L1Q9UHC9 1359 aa21.47■■□□□ 1.03
LITAF-201ENST00000339430 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
LITAF-201ENST00000339430 CRBNQ96SW2 442 aa21.47■■□□□ 1.03
LITAF-201ENST00000339430 CABP2Q9NPB3 220 aa21.46■■□□□ 1.03
LITAF-201ENST00000339430 ROBO2Q9HCK4 1378 aa21.46■■□□□ 1.03
LITAF-201ENST00000339430 CPS1P31327 1500 aa21.45■■□□□ 1.03
LITAF-201ENST00000339430 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
LITAF-201ENST00000339430 AMOTL2Q9Y2J4 779 aa21.45■■□□□ 1.02
LITAF-201ENST00000339430 FAM135BQ49AJ0 1406 aa21.45■■□□□ 1.02
LITAF-201ENST00000339430 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
LITAF-201ENST00000339430 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
LITAF-201ENST00000339430 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
LITAF-201ENST00000339430 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
LITAF-201ENST00000339430 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
LITAF-201ENST00000339430 ZNF521Q96K83 1311 aa21.42■■□□□ 1.02
LITAF-201ENST00000339430 PUS7Q96PZ0 661 aaKnown RBP21.41■■□□□ 1.02
LITAF-201ENST00000339430 CDK19Q9BWU1 502 aa21.41■■□□□ 1.02
LITAF-201ENST00000339430 NPHP4O75161 1426 aaPredicted RBP21.41■■□□□ 1.02
LITAF-201ENST00000339430 SLC12A5Q9H2X9 1139 aa21.41■■□□□ 1.02
LITAF-201ENST00000339430 APAF1O14727 1248 aa21.4■■□□□ 1.02
LITAF-201ENST00000339430 HSPA2P54652 639 aa21.39■■□□□ 1.01
LITAF-201ENST00000339430 PIK3R4Q99570 1358 aa21.38■■□□□ 1.01
LITAF-201ENST00000339430 TNNT2P45379 298 aaPredicted RBP21.38■■□□□ 1.01
LITAF-201ENST00000339430 KCNA6P17658 529 aa21.37■■□□□ 1.01
LITAF-201ENST00000339430 SKAP1Q86WV1 359 aa21.37■■□□□ 1.01
LITAF-201ENST00000339430 ANP32AP39687 249 aaKnown RBP21.37■■□□□ 1.01
LITAF-201ENST00000339430 SPINK5Q9NQ38 1064 aaPredicted RBP21.37■■□□□ 1.01
LITAF-201ENST00000339430 NOP58Q9Y2X3 529 aaKnown RBP21.37■■□□□ 1.01
LITAF-201ENST00000339430 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
LITAF-201ENST00000339430 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
LITAF-201ENST00000339430 XRN1Q8IZH2 1706 aaKnown RBP21.36■■□□□ 1.01
LITAF-201ENST00000339430 WASLO00401 505 aaPredicted RBP21.36■■□□□ 1.01
LITAF-201ENST00000339430 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
LITAF-201ENST00000339430 PTCH1Q13635 1447 aa21.36■■□□□ 1.01
LITAF-201ENST00000339430 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
LITAF-201ENST00000339430 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
LITAF-201ENST00000339430 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.34■■□□□ 1.01
LITAF-201ENST00000339430 LMTK3Q96Q04 1460 aa21.33■■□□□ 1
LITAF-201ENST00000339430 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
LITAF-201ENST00000339430 MORC1Q86VD1 984 aa21.32■■□□□ 1
LITAF-201ENST00000339430 CHD2O14647 1828 aaKnown RBP21.32■■□□□ 1
LITAF-201ENST00000339430 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
LITAF-201ENST00000339430 PDE4AP27815 886 aa21.3■■□□□ 1
LITAF-201ENST00000339430 IPO9Q96P70 1041 aaKnown RBP21.3■■□□□ 1
LITAF-201ENST00000339430 CABP1Q9NZU7 370 aa21.3■■□□□ 1
LITAF-201ENST00000339430 NINLQ9Y2I6 1382 aa21.3■■□□□ 1
LITAF-201ENST00000339430 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
LITAF-201ENST00000339430 TRMT2AQ8IZ69 625 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms