RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 LTKP29376 864 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 ALKQ9UM73 1620 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 TULP4Q9NRJ4 1543 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 METP08581 1390 aa9.94□□□□□ -0.82
SRFBP1-201ENST00000339397 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
SRFBP1-201ENST00000339397 TNRQ92752 1358 aa9.93□□□□□ -0.82
SRFBP1-201ENST00000339397 ARHGEF28Q8N1W1 1705 aaKnown RBP9.93□□□□□ -0.82
SRFBP1-201ENST00000339397 CCDC146Q8IYE0 955 aa9.92□□□□□ -0.82
SRFBP1-201ENST00000339397 CDK19Q9BWU1 502 aa9.92□□□□□ -0.82
SRFBP1-201ENST00000339397 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
SRFBP1-201ENST00000339397 PRKCSHP14314 528 aaPredicted RBP9.92□□□□□ -0.82
SRFBP1-201ENST00000339397 SLC26A8Q96RN1 970 aa9.91□□□□□ -0.82
SRFBP1-201ENST00000339397 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
SRFBP1-201ENST00000339397 NUDCQ9Y266 331 aa9.91□□□□□ -0.82
SRFBP1-201ENST00000339397 ADRA2BP18089 450 aa9.9□□□□□ -0.82
SRFBP1-201ENST00000339397 MORC1Q86VD1 984 aa9.9□□□□□ -0.82
SRFBP1-201ENST00000339397 FBLN1P23142 703 aa9.9□□□□□ -0.82
SRFBP1-201ENST00000339397 NPC1L1Q9UHC9 1359 aa9.89□□□□□ -0.83
SRFBP1-201ENST00000339397 GGNBP2Q9H3C7 697 aa9.89□□□□□ -0.83
SRFBP1-201ENST00000339397 A0A1W2PP64 1363 aa9.89□□□□□ -0.83
SRFBP1-201ENST00000339397 TMEM2Q9UHN6 1383 aa9.89□□□□□ -0.83
SRFBP1-201ENST00000339397 WDR43Q15061 677 aaKnown RBP eCLIP9.89□□□□□ -0.83
SRFBP1-201ENST00000339397 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
SRFBP1-201ENST00000339397 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
SRFBP1-201ENST00000339397 MTHFSP49914 203 aa9.88□□□□□ -0.83
SRFBP1-201ENST00000339397 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.88□□□□□ -0.83
SRFBP1-201ENST00000339397 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
SRFBP1-201ENST00000339397 CGNL1Q0VF96 1302 aa9.87□□□□□ -0.83
SRFBP1-201ENST00000339397 ANKRD36BQ8N2N9 1353 aa9.87□□□□□ -0.83
SRFBP1-201ENST00000339397 APAF1O14727 1248 aa9.86□□□□□ -0.83
SRFBP1-201ENST00000339397 FYB1O15117 783 aa9.86□□□□□ -0.83
SRFBP1-201ENST00000339397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRFBP1-201ENST00000339397 ABCC11Q96J66 1382 aa9.86□□□□□ -0.83
SRFBP1-201ENST00000339397 BLMP54132 1417 aaPredicted RBP9.86□□□□□ -0.83
SRFBP1-201ENST00000339397 PUS7Q96PZ0 661 aaKnown RBP9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 CD163L1Q9NR16 1453 aa9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 DMRT2Q9Y5R5 561 aa9.85□□□□□ -0.83
SRFBP1-201ENST00000339397 ROBO2Q9HCK4 1378 aa9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 ADAMTS13Q76LX8 1427 aa9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 UBR1Q8IWV7 1749 aa9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
SRFBP1-201ENST00000339397 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
SRFBP1-201ENST00000339397 RRP7AQ9Y3A4 280 aaKnown RBP9.83□□□□□ -0.84
SRFBP1-201ENST00000339397 PLIN1O60240 522 aa9.83□□□□□ -0.84
SRFBP1-201ENST00000339397 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
SRFBP1-201ENST00000339397 C3P01024 1663 aa9.83□□□□□ -0.84
SRFBP1-201ENST00000339397 ATAD2Q6PL18 1390 aa9.82□□□□□ -0.84
SRFBP1-201ENST00000339397 NUDT16Q96DE0 195 aaKnown RBP9.82□□□□□ -0.84
SRFBP1-201ENST00000339397 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
SRFBP1-201ENST00000339397 PRR36Q9H6K5 1346 aa9.82□□□□□ -0.84
SRFBP1-201ENST00000339397 RBM33Q96EV2 1170 aaKnown RBP9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 RCAN3Q9UKA8 241 aa9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 EID1Q9Y6B2 187 aa9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 PTPRUQ92729 1446 aa9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 AMOTL2Q9Y2J4 779 aa9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 POLR3AO14802 1390 aaPredicted RBP9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 HDGFL2Q7Z4V5 671 aaPredicted RBP9.81□□□□□ -0.84
SRFBP1-201ENST00000339397 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 NME9Q86XW9 330 aa9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 THEMISQ8N1K5 641 aaPredicted RBP9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 PPM1GO15355 546 aaPredicted RBP9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
SRFBP1-201ENST00000339397 NLRP1Q9C000 1473 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 FER1L4A9Z1Z3 1794 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 PLEKHG1Q9ULL1 1385 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 DLC1Q96QB1 1528 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 CCDC61Q9Y6R9 512 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
SRFBP1-201ENST00000339397 U2AF1L5P0DN76 240 aaPredicted RBP9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 U2AF1Q01081 240 aaKnown RBP eCLIP9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 PPP4R2Q9NY27 417 aa9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 INSRP06213 1382 aa9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 TCP11L2Q8N4U5 519 aa9.78□□□□□ -0.84
SRFBP1-201ENST00000339397 U2SURPO15042 1029 aaKnown RBP9.77□□□□□ -0.84
SRFBP1-201ENST00000339397 NINLQ9Y2I6 1382 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 KCNA6P17658 529 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 SLFN5Q08AF3 891 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 C20orf194Q5TEA3 1177 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 TECPR2O15040 1411 aa9.77□□□□□ -0.85
SRFBP1-201ENST00000339397 MED14O60244 1454 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 FAM135BQ49AJ0 1406 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 SIRT1Q96EB6 747 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 TBX22Q9Y458 520 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 RRS1Q15050 365 aaKnown RBP9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 POLKQ9UBT6 870 aa9.76□□□□□ -0.85
SRFBP1-201ENST00000339397 NSD2O96028 1365 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms