RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SHPRHQ149N8 1683 aa19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 PNPLA6Q8IY17 1366 aa19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 ADAMTS2O95450 1211 aa19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 SOS2Q07890 1332 aaPredicted RBP19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
NUDCD3-201ENST00000338427 PIK3C2GO75747 1445 aa19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 FOXO3O43524 673 aa19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 C8orf37Q96NL8 207 aa19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 AFF2P51816 1311 aa19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
NUDCD3-201ENST00000338427 PRAG1Q86YV5 1406 aa19.69■□□□□ 0.74
NUDCD3-201ENST00000338427 YTHDC2Q9H6S0 1430 aaKnown RBP19.68■□□□□ 0.74
NUDCD3-201ENST00000338427 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
NUDCD3-201ENST00000338427 RXRBP28702 533 aa19.65■□□□□ 0.74
NUDCD3-201ENST00000338427 NGLY1Q96IV0 654 aa19.65■□□□□ 0.74
NUDCD3-201ENST00000338427 PRAM1Q96QH2 718 aa19.65■□□□□ 0.74
NUDCD3-201ENST00000338427 QTRT2Q9H974 415 aaKnown RBP19.65■□□□□ 0.74
NUDCD3-201ENST00000338427 TECPR2O15040 1411 aa19.65■□□□□ 0.74
NUDCD3-201ENST00000338427 HRCP23327 699 aa19.64■□□□□ 0.73
NUDCD3-201ENST00000338427 SIRT1Q96EB6 747 aa19.64■□□□□ 0.73
NUDCD3-201ENST00000338427 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.73
NUDCD3-201ENST00000338427 TRAK1Q9UPV9 953 aa19.63■□□□□ 0.73
NUDCD3-201ENST00000338427 NRXN1Q9ULB1 1477 aa19.62■□□□□ 0.73
NUDCD3-201ENST00000338427 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
NUDCD3-201ENST00000338427 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
NUDCD3-201ENST00000338427 POGKQ9P215 609 aa19.6■□□□□ 0.73
NUDCD3-201ENST00000338427 KRT28Q7Z3Y7 464 aa19.59■□□□□ 0.73
NUDCD3-201ENST00000338427 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
NUDCD3-201ENST00000338427 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.73
NUDCD3-201ENST00000338427 MYOM2P54296 1465 aa19.58■□□□□ 0.72
NUDCD3-201ENST00000338427 LAMC1P11047 1609 aa19.58■□□□□ 0.72
NUDCD3-201ENST00000338427 PXDNQ92626 1479 aa19.56■□□□□ 0.72
NUDCD3-201ENST00000338427 PMFBP1Q8TBY8 1022 aa19.56■□□□□ 0.72
NUDCD3-201ENST00000338427 UPF1Q92900 1129 aaKnown RBP eCLIP19.56■□□□□ 0.721e-8■■■■■ 31.3
NUDCD3-201ENST00000338427 USP21Q9UK80 565 aa19.56■□□□□ 0.72
NUDCD3-201ENST00000338427 PHF8Q9UPP1 1060 aa19.56■□□□□ 0.72
NUDCD3-201ENST00000338427 KNDC1Q76NI1 1749 aa19.56■□□□□ 0.72
NUDCD3-201ENST00000338427 MINK1Q8N4C8 1332 aaPredicted RBP19.55■□□□□ 0.72
NUDCD3-201ENST00000338427 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
NUDCD3-201ENST00000338427 RBM6P78332 1123 aaKnown RBP19.54■□□□□ 0.72
NUDCD3-201ENST00000338427 FNBP4Q8N3X1 1017 aaPredicted RBP19.53■□□□□ 0.72
NUDCD3-201ENST00000338427 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
NUDCD3-201ENST00000338427 SPATA31A3Q5VYP0 1347 aa19.52■□□□□ 0.72
NUDCD3-201ENST00000338427 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
NUDCD3-201ENST00000338427 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
NUDCD3-201ENST00000338427 PSME1Q06323 249 aa19.5■□□□□ 0.71
NUDCD3-201ENST00000338427 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
NUDCD3-201ENST00000338427 PRR36Q9H6K5 1346 aa19.5■□□□□ 0.71
NUDCD3-201ENST00000338427 NBPF1Q3BBV0 1214 aa19.48■□□□□ 0.71
NUDCD3-201ENST00000338427 TRPC5Q9UL62 973 aaPredicted RBP19.48■□□□□ 0.71
NUDCD3-201ENST00000338427 RGS12O14924 1447 aa19.46■□□□□ 0.71
NUDCD3-201ENST00000338427 WASLO00401 505 aaPredicted RBP19.46■□□□□ 0.71
NUDCD3-201ENST00000338427 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
NUDCD3-201ENST00000338427 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
NUDCD3-201ENST00000338427 DLC1Q96QB1 1528 aa19.46■□□□□ 0.71
NUDCD3-201ENST00000338427 STAC3Q96MF2 364 aa19.45■□□□□ 0.7
NUDCD3-201ENST00000338427 BCL9LQ86UU0 1499 aa19.44■□□□□ 0.7
NUDCD3-201ENST00000338427 CDK12Q9NYV4 1490 aaPredicted RBP19.43■□□□□ 0.7
NUDCD3-201ENST00000338427 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
NUDCD3-201ENST00000338427 ATRNO75882 1429 aa19.42■□□□□ 0.7
NUDCD3-201ENST00000338427 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
NUDCD3-201ENST00000338427 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
NUDCD3-201ENST00000338427 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
NUDCD3-201ENST00000338427 GJD4Q96KN9 370 aaPredicted RBP19.4■□□□□ 0.7
NUDCD3-201ENST00000338427 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
NUDCD3-201ENST00000338427 KIF1AQ12756 1690 aa19.4■□□□□ 0.7
NUDCD3-201ENST00000338427 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 UNC5CLQ8IV45 518 aa19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 L3MBTL2Q969R5 705 aa19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 SBNO1A3KN83 1393 aa19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 TNS3Q68CZ2 1445 aa19.39■□□□□ 0.69
NUDCD3-201ENST00000338427 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
NUDCD3-201ENST00000338427 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
NUDCD3-201ENST00000338427 MARF1Q9Y4F3 1742 aaKnown RBP19.35■□□□□ 0.69
NUDCD3-201ENST00000338427 NUTM2GQ5VZR2 741 aa19.34■□□□□ 0.69
NUDCD3-201ENST00000338427 ADGRB2O60241 1585 aa19.34■□□□□ 0.69
NUDCD3-201ENST00000338427 SLIT2O94813 1529 aa19.34■□□□□ 0.69
NUDCD3-201ENST00000338427 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
NUDCD3-201ENST00000338427 TULP4Q9NRJ4 1543 aa19.32■□□□□ 0.68
NUDCD3-201ENST00000338427 ARHGEF28Q8N1W1 1705 aaKnown RBP19.32■□□□□ 0.68
NUDCD3-201ENST00000338427 CCDC9Q9Y3X0 531 aaKnown RBP19.32■□□□□ 0.68
NUDCD3-201ENST00000338427 ARHGEF10O15013 1369 aa19.31■□□□□ 0.68
NUDCD3-201ENST00000338427 RALGAPBQ86X10 1494 aa19.3■□□□□ 0.68
NUDCD3-201ENST00000338427 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
NUDCD3-201ENST00000338427 CABP2Q9NPB3 220 aa19.3■□□□□ 0.68
NUDCD3-201ENST00000338427 ACEP12821 1306 aa19.29■□□□□ 0.68
NUDCD3-201ENST00000338427 VPS72Q15906 364 aa19.29■□□□□ 0.68
NUDCD3-201ENST00000338427 SEPT12Q8IYM1 358 aa19.29■□□□□ 0.68
NUDCD3-201ENST00000338427 BTG4Q9NY30 223 aa19.29■□□□□ 0.68
NUDCD3-201ENST00000338427 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
NUDCD3-201ENST00000338427 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
NUDCD3-201ENST00000338427 EIF3AQ14152 1382 aaKnown RBP19.28■□□□□ 0.68
NUDCD3-201ENST00000338427 GLI3P10071 1580 aa19.27■□□□□ 0.68
NUDCD3-201ENST00000338427 ATAD2Q6PL18 1390 aa19.27■□□□□ 0.68
NUDCD3-201ENST00000338427 ATP7BP35670 1465 aa19.27■□□□□ 0.67
NUDCD3-201ENST00000338427 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms