RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
CPM-201ENST00000338356 CCDC39Q9UFE4 941 aa10.4□□□□□ -0.74
CPM-201ENST00000338356 TPM2P07951 284 aa10.4□□□□□ -0.74
CPM-201ENST00000338356 KDM4AO75164 1064 aa10.4□□□□□ -0.75
CPM-201ENST00000338356 GPS2Q13227 327 aa10.4□□□□□ -0.75
CPM-201ENST00000338356 IFT57Q9NWB7 429 aa10.4□□□□□ -0.75
CPM-201ENST00000338356 HOMER1Q86YM7 354 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 PKNOX2Q96KN3 472 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 SLC52A1Q9NWF4 448 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 MSH6P52701 1360 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 TOM1L2Q6ZVM7 507 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 MINK1Q8N4C8 1332 aaPredicted RBP10.39□□□□□ -0.75
CPM-201ENST00000338356 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 C22orf23Q9BZE7 217 aa10.39□□□□□ -0.75
CPM-201ENST00000338356 NASPP49321 788 aaPredicted RBP10.38□□□□□ -0.75
CPM-201ENST00000338356 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
CPM-201ENST00000338356 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
CPM-201ENST00000338356 VPS37DQ86XT2 251 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 APAF1O14727 1248 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 DIAPH3Q9NSV4 1193 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 SCAPERQ9BY12 1400 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 CCDC34Q96HJ3 373 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 CUX1P39880 1505 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 MARCH6O60337 910 aa10.38□□□□□ -0.75
CPM-201ENST00000338356 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 NGEFQ8N5V2 710 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 SASS6Q6UVJ0 657 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 PRDM11Q9NQV5 511 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 ATP6V1DQ9Y5K8 247 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 DENND4BO75064 1496 aaPredicted RBP10.37□□□□□ -0.75
CPM-201ENST00000338356 KIF21BO75037 1637 aa10.37□□□□□ -0.75
CPM-201ENST00000338356 TATP17735 454 aaPredicted RBP10.37□□□□□ -0.75
CPM-201ENST00000338356 CCDC7Q96M83 1385 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 TPM1P09493 284 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 POLD1P28340 1107 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
CPM-201ENST00000338356 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 DDX19BQ9UMR2 479 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 VPS37CA5D8V6 355 aaPredicted RBP10.36□□□□□ -0.75
CPM-201ENST00000338356 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
CPM-201ENST00000338356 EIF2S2P20042 333 aaKnown RBP10.36□□□□□ -0.75
CPM-201ENST00000338356 INTS3Q68E01 1043 aaKnown RBP10.36□□□□□ -0.75
CPM-201ENST00000338356 ABTB2Q8N961 1025 aa10.35□□□□□ -0.75
CPM-201ENST00000338356 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
CPM-201ENST00000338356 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
CPM-201ENST00000338356 TRAK2O60296 914 aa10.35□□□□□ -0.75
CPM-201ENST00000338356 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
CPM-201ENST00000338356 KIF6Q6ZMV9 814 aa10.35□□□□□ -0.75
CPM-201ENST00000338356 FANCAO15360 1455 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 RNF214Q8ND24 703 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 CEP89Q96ST8 783 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 TSPY26PQ9H489 355 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 RIPK4P57078 832 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 SMC3Q9UQE7 1217 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 KIAA0586Q9BVV6 1533 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 LRRFIP1Q32MZ4 808 aaKnown RBP10.34□□□□□ -0.75
CPM-201ENST00000338356 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
CPM-201ENST00000338356 KIF7Q2M1P5 1343 aa10.34□□□□□ -0.75
CPM-201ENST00000338356 TRIM29Q14134 588 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 ADAMTS2O95450 1211 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 MRE11P49959 708 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 PDILTQ8N807 584 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 AKAP17AQ02040 695 aaKnown RBP10.33□□□□□ -0.76
CPM-201ENST00000338356 IGF1RP08069 1367 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 POLA1P09884 1462 aaPredicted RBP10.33□□□□□ -0.76
CPM-201ENST00000338356 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 SPC24Q8NBT2 197 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 REC8O95072 547 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 NOM1Q5C9Z4 860 aaKnown RBP10.33□□□□□ -0.76
CPM-201ENST00000338356 RRBP1Q9P2E9 1410 aaKnown RBP10.33□□□□□ -0.76
CPM-201ENST00000338356 TTLL5Q6EMB2 1281 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 SPG7Q9UQ90 795 aa10.33□□□□□ -0.76
CPM-201ENST00000338356 IFIT2P09913 472 aaKnown RBP10.32□□□□□ -0.76
CPM-201ENST00000338356 NLRP6P59044 892 aa10.32□□□□□ -0.76
CPM-201ENST00000338356 SKIDA1Q1XH10 827 aa10.32□□□□□ -0.76
CPM-201ENST00000338356 AK7Q96M32 723 aa10.32□□□□□ -0.76
CPM-201ENST00000338356 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
CPM-201ENST00000338356 MNS1Q8NEH6 495 aa10.32□□□□□ -0.76
CPM-201ENST00000338356 CCDC173Q0VFZ6 552 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 NFXL1Q6ZNB6 911 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 RUNDC1Q96C34 613 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 FAM135AQ9P2D6 1515 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 RAD21O60216 631 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 NAP1L1P55209 391 aaKnown RBP10.31□□□□□ -0.76
CPM-201ENST00000338356 C1orf115Q9H7X2 142 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 AFAP1Q8N556 730 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 RBM42Q9BTD8 480 aaKnown RBP10.31□□□□□ -0.76
CPM-201ENST00000338356 NUCB2P80303 420 aa10.31□□□□□ -0.76
CPM-201ENST00000338356 PLEKHO1Q53GL0 409 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms