RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 TONSLQ96HA7 1378 aa9.99□□□□□ -0.81
ATF3-201ENST00000336937 C1orf167Q5SNV9 1468 aa9.98□□□□□ -0.81
ATF3-201ENST00000336937 TIMELESSQ9UNS1 1208 aa9.97□□□□□ -0.81
ATF3-201ENST00000336937 JCADQ9P266 1359 aa9.97□□□□□ -0.81
ATF3-201ENST00000336937 TULP4Q9NRJ4 1543 aa9.97□□□□□ -0.81
ATF3-201ENST00000336937 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
ATF3-201ENST00000336937 CFAP70Q5T0N1 1121 aa9.96□□□□□ -0.82
ATF3-201ENST00000336937 RALGAPBQ86X10 1494 aa9.96□□□□□ -0.82
ATF3-201ENST00000336937 HSPA1LP34931 641 aa9.95□□□□□ -0.82
ATF3-201ENST00000336937 SPATA31A6Q5VVP1 1343 aa9.95□□□□□ -0.82
ATF3-201ENST00000336937 NPHP3Q7Z494 1330 aa9.95□□□□□ -0.82
ATF3-201ENST00000336937 QRICH2Q9H0J4 1663 aa9.95□□□□□ -0.82
ATF3-201ENST00000336937 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
ATF3-201ENST00000336937 GPRASP1Q5JY77 1395 aa9.94□□□□□ -0.82
ATF3-201ENST00000336937 SLC24A1O60721 1099 aa9.94□□□□□ -0.82
ATF3-201ENST00000336937 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
ATF3-201ENST00000336937 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
ATF3-201ENST00000336937 ROCK2O75116 1388 aaKnown RBP9.93□□□□□ -0.82
ATF3-201ENST00000336937 SBNO2Q9Y2G9 1366 aa9.93□□□□□ -0.82
ATF3-201ENST00000336937 POGKQ9P215 609 aa9.93□□□□□ -0.82
ATF3-201ENST00000336937 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
ATF3-201ENST00000336937 TMEM132EQ6IEE7 984 aa9.92□□□□□ -0.82
ATF3-201ENST00000336937 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
ATF3-201ENST00000336937 PRAM1Q96QH2 718 aa9.92□□□□□ -0.82
ATF3-201ENST00000336937 STK26Q9P289 416 aa9.92□□□□□ -0.82
ATF3-201ENST00000336937 TOPAZ1Q8N9V7 1692 aa9.92□□□□□ -0.82
ATF3-201ENST00000336937 L3MBTL2Q969R5 705 aa9.91□□□□□ -0.82
ATF3-201ENST00000336937 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
ATF3-201ENST00000336937 TRAK1Q9UPV9 953 aa9.9□□□□□ -0.82
ATF3-201ENST00000336937 PXDNQ92626 1479 aa9.9□□□□□ -0.83
ATF3-201ENST00000336937 BRD4O60885 1362 aaPredicted RBP9.89□□□□□ -0.83
ATF3-201ENST00000336937 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
ATF3-201ENST00000336937 PLEKHH1Q9ULM0 1364 aa9.89□□□□□ -0.83
ATF3-201ENST00000336937 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
ATF3-201ENST00000336937 CENPJQ9HC77 1338 aaPredicted RBP9.89□□□□□ -0.83
ATF3-201ENST00000336937 ATP7BP35670 1465 aa9.89□□□□□ -0.83
ATF3-201ENST00000336937 WAPLQ7Z5K2 1190 aa9.88□□□□□ -0.83
ATF3-201ENST00000336937 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
ATF3-201ENST00000336937 ARHGEF10O15013 1369 aa9.88□□□□□ -0.83
ATF3-201ENST00000336937 WASLO00401 505 aaPredicted RBP9.87□□□□□ -0.83
ATF3-201ENST00000336937 NEUROD1Q13562 356 aa9.87□□□□□ -0.83
ATF3-201ENST00000336937 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
ATF3-201ENST00000336937 MARF1Q9Y4F3 1742 aaKnown RBP9.87□□□□□ -0.83
ATF3-201ENST00000336937 SBNO1A3KN83 1393 aa9.87□□□□□ -0.83
ATF3-201ENST00000336937 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
ATF3-201ENST00000336937 PSME1Q06323 249 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 SIN3AQ96ST3 1273 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 PHF23Q9BUL5 403 aaPredicted RBP9.86□□□□□ -0.83
ATF3-201ENST00000336937 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
ATF3-201ENST00000336937 TRPM3Q9HCF6 1732 aaPredicted RBP9.85□□□□□ -0.83
ATF3-201ENST00000336937 EVC2Q86UK5 1308 aa9.84□□□□□ -0.83
ATF3-201ENST00000336937 ALS2Q96Q42 1657 aa9.84□□□□□ -0.83
ATF3-201ENST00000336937 PHF8Q9UPP1 1060 aa9.84□□□□□ -0.83
ATF3-201ENST00000336937 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
ATF3-201ENST00000336937 ABCA3Q99758 1704 aa9.84□□□□□ -0.83
ATF3-201ENST00000336937 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.84□□□□□ -0.83
ATF3-201ENST00000336937 PUS7Q96PZ0 661 aaKnown RBP9.83□□□□□ -0.84
ATF3-201ENST00000336937 ORAI2Q96SN7 254 aa9.83□□□□□ -0.84
ATF3-201ENST00000336937 CARD11Q9BXL7 1154 aa9.83□□□□□ -0.84
ATF3-201ENST00000336937 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
ATF3-201ENST00000336937 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
ATF3-201ENST00000336937 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATF3-201ENST00000336937 NBPF1Q3BBV0 1214 aa9.82□□□□□ -0.84
ATF3-201ENST00000336937 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
ATF3-201ENST00000336937 LRP6O75581 1613 aa9.82□□□□□ -0.84
ATF3-201ENST00000336937 MEX3CQ5U5Q3 659 aaKnown RBP9.81□□□□□ -0.84
ATF3-201ENST00000336937 ZNF772Q68DY9 489 aaPredicted RBP9.81□□□□□ -0.84
ATF3-201ENST00000336937 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
ATF3-201ENST00000336937 PPIP5K1Q6PFW1 1433 aa9.81□□□□□ -0.84
ATF3-201ENST00000336937 SPATA31A3Q5VYP0 1347 aa9.81□□□□□ -0.84
ATF3-201ENST00000336937 AKAP12Q02952 1782 aa9.8□□□□□ -0.84
ATF3-201ENST00000336937 CRYBG1Q9Y4K1 1723 aa9.8□□□□□ -0.84
ATF3-201ENST00000336937 FOXO3O43524 673 aa9.8□□□□□ -0.84
ATF3-201ENST00000336937 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
ATF3-201ENST00000336937 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
ATF3-201ENST00000336937 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
ATF3-201ENST00000336937 MON2Q7Z3U7 1717 aa9.79□□□□□ -0.84
ATF3-201ENST00000336937 PLEKHG3A1L390 1219 aa9.79□□□□□ -0.84
ATF3-201ENST00000336937 CDCA8Q53HL2 280 aa9.79□□□□□ -0.84
ATF3-201ENST00000336937 NUDT16Q96DE0 195 aaKnown RBP9.79□□□□□ -0.84
ATF3-201ENST00000336937 HIRIP3Q9BW71 556 aaPredicted RBP9.79□□□□□ -0.84
ATF3-201ENST00000336937 CDK19Q9BWU1 502 aa9.79□□□□□ -0.84
ATF3-201ENST00000336937 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
ATF3-201ENST00000336937 USP47Q96K76 1375 aa9.78□□□□□ -0.84
ATF3-201ENST00000336937 USP54Q70EL1 1684 aa9.78□□□□□ -0.84
ATF3-201ENST00000336937 KRT28Q7Z3Y7 464 aa9.78□□□□□ -0.84
ATF3-201ENST00000336937 NGDNQ8NEJ9 315 aaKnown RBP9.78□□□□□ -0.84
ATF3-201ENST00000336937 PRR36Q9H6K5 1346 aa9.78□□□□□ -0.84
ATF3-201ENST00000336937 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
ATF3-201ENST00000336937 ABCC6O95255 1503 aa9.77□□□□□ -0.84
ATF3-201ENST00000336937 USP6P35125 1406 aa9.77□□□□□ -0.85
ATF3-201ENST00000336937 NUTM2FA1L443 756 aa9.77□□□□□ -0.85
ATF3-201ENST00000336937 NBPF8Q3BBV2 869 aa9.77□□□□□ -0.85
ATF3-201ENST00000336937 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
ATF3-201ENST00000336937 PLCH1Q4KWH8 1693 aa9.76□□□□□ -0.85
ATF3-201ENST00000336937 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms