RNA–Protein interactions for RNA: ENST00000336915.10

SKAP1-201, Transcript of src kinase associated phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP1, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-201ENST00000336915 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
SKAP1-201ENST00000336915 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
SKAP1-201ENST00000336915 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
SKAP1-201ENST00000336915 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
SKAP1-201ENST00000336915 CDC42BPGQ6DT37 1551 aa12.71□□□□□ -0.37
SKAP1-201ENST00000336915 SOS2Q07890 1332 aaPredicted RBP12.7□□□□□ -0.38
SKAP1-201ENST00000336915 ATRNO75882 1429 aa12.7□□□□□ -0.38
SKAP1-201ENST00000336915 USP21Q9UK80 565 aa12.7□□□□□ -0.38
SKAP1-201ENST00000336915 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
SKAP1-201ENST00000336915 ATAD2Q6PL18 1390 aa12.7□□□□□ -0.38
SKAP1-201ENST00000336915 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 MYOM2P54296 1465 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 PXDNQ92626 1479 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 GLI3P10071 1580 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
SKAP1-201ENST00000336915 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
SKAP1-201ENST00000336915 BCL9LQ86UU0 1499 aa12.67□□□□□ -0.38
SKAP1-201ENST00000336915 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
SKAP1-201ENST00000336915 NAIPQ13075 1403 aa12.66□□□□□ -0.38
SKAP1-201ENST00000336915 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
SKAP1-201ENST00000336915 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
SKAP1-201ENST00000336915 KIF1AQ12756 1690 aa12.65□□□□□ -0.39
SKAP1-201ENST00000336915 HFM1A2PYH4 1435 aa12.64□□□□□ -0.39
SKAP1-201ENST00000336915 FNBP4Q8N3X1 1017 aaPredicted RBP12.64□□□□□ -0.39
SKAP1-201ENST00000336915 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
SKAP1-201ENST00000336915 ESCO1Q5FWF5 840 aa12.62□□□□□ -0.39
SKAP1-201ENST00000336915 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
SKAP1-201ENST00000336915 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
SKAP1-201ENST00000336915 VGFO15240 615 aaPredicted RBP12.61□□□□□ -0.39
SKAP1-201ENST00000336915 FOXO3O43524 673 aa12.61□□□□□ -0.39
SKAP1-201ENST00000336915 PLEKHH1Q9ULM0 1364 aa12.61□□□□□ -0.39
SKAP1-201ENST00000336915 RALGAPBQ86X10 1494 aa12.6□□□□□ -0.39
SKAP1-201ENST00000336915 NRAPQ86VF7 1730 aa12.6□□□□□ -0.39
SKAP1-201ENST00000336915 FOXD1Q16676 465 aa12.6□□□□□ -0.39
SKAP1-201ENST00000336915 NPHP3Q7Z494 1330 aa12.6□□□□□ -0.39
SKAP1-201ENST00000336915 SLIT2O94813 1529 aa12.6□□□□□ -0.39
SKAP1-201ENST00000336915 WAPLQ7Z5K2 1190 aa12.59□□□□□ -0.39
SKAP1-201ENST00000336915 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
SKAP1-201ENST00000336915 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
SKAP1-201ENST00000336915 ADGRF5Q8IZF2 1346 aa12.59□□□□□ -0.39
SKAP1-201ENST00000336915 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
SKAP1-201ENST00000336915 LRP5O75197 1615 aa12.58□□□□□ -0.4
SKAP1-201ENST00000336915 STK26Q9P289 416 aa12.57□□□□□ -0.4
SKAP1-201ENST00000336915 TECPR2O15040 1411 aa12.57□□□□□ -0.4
SKAP1-201ENST00000336915 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
SKAP1-201ENST00000336915 TRPM3Q9HCF6 1732 aaPredicted RBP12.56□□□□□ -0.4
SKAP1-201ENST00000336915 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
SKAP1-201ENST00000336915 RPGRIP1LQ68CZ1 1315 aa12.56□□□□□ -0.4
SKAP1-201ENST00000336915 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
SKAP1-201ENST00000336915 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
SKAP1-201ENST00000336915 TMEM132EQ6IEE7 984 aa12.55□□□□□ -0.4
SKAP1-201ENST00000336915 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
SKAP1-201ENST00000336915 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
SKAP1-201ENST00000336915 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
SKAP1-201ENST00000336915 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
SKAP1-201ENST00000336915 RGPD1P0DJD0 1748 aa12.54□□□□□ -0.4
SKAP1-201ENST00000336915 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
SKAP1-201ENST00000336915 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
SKAP1-201ENST00000336915 SPATA31A3Q5VYP0 1347 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 TNS3Q68CZ2 1445 aa12.53□□□□□ -0.4
SKAP1-201ENST00000336915 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.4
SKAP1-201ENST00000336915 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
SKAP1-201ENST00000336915 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
SKAP1-201ENST00000336915 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
SKAP1-201ENST00000336915 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
SKAP1-201ENST00000336915 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
SKAP1-201ENST00000336915 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
SKAP1-201ENST00000336915 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
SKAP1-201ENST00000336915 NRXN1Q9ULB1 1477 aa12.5□□□□□ -0.41
SKAP1-201ENST00000336915 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
SKAP1-201ENST00000336915 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
SKAP1-201ENST00000336915 CCDC9Q9Y3X0 531 aaKnown RBP12.47□□□□□ -0.41
SKAP1-201ENST00000336915 ADGRB2O60241 1585 aa12.47□□□□□ -0.41
SKAP1-201ENST00000336915 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
SKAP1-201ENST00000336915 PHRF1Q9P1Y6 1649 aaKnown RBP12.47□□□□□ -0.41
SKAP1-201ENST00000336915 ANKRD30BQ9BXX2 1392 aa12.47□□□□□ -0.41
SKAP1-201ENST00000336915 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
SKAP1-201ENST00000336915 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.42
SKAP1-201ENST00000336915 VPS72Q15906 364 aa12.46□□□□□ -0.42
SKAP1-201ENST00000336915 LMOD2Q6P5Q4 547 aa12.46□□□□□ -0.42
SKAP1-201ENST00000336915 PHF8Q9UPP1 1060 aa12.46□□□□□ -0.42
SKAP1-201ENST00000336915 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
SKAP1-201ENST00000336915 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
SKAP1-201ENST00000336915 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
SKAP1-201ENST00000336915 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
SKAP1-201ENST00000336915 A0A0G2JS52 829 aa12.44□□□□□ -0.42
SKAP1-201ENST00000336915 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
SKAP1-201ENST00000336915 PMFBP1Q8TBY8 1022 aa12.44□□□□□ -0.42
SKAP1-201ENST00000336915 SBNO1A3KN83 1393 aa12.44□□□□□ -0.42
SKAP1-201ENST00000336915 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
SKAP1-201ENST00000336915 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
SKAP1-201ENST00000336915 RREB1Q92766 1687 aa12.43□□□□□ -0.42
SKAP1-201ENST00000336915 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
SKAP1-201ENST00000336915 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms