RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 PDE3AQ14432 1141 aa10.98□□□□□ -0.65
HNRNPC-201ENST00000336053 RALGAPBQ86X10 1494 aa10.98□□□□□ -0.65
HNRNPC-201ENST00000336053 C17orf53Q8N3J3 647 aaPredicted RBP10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 TRERF1Q96PN7 1200 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 KIAA1107Q9UPP5 1409 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 ARHGEF12Q9NZN5 1544 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 SYCE3A1L190 88 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 TERF1P54274 439 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 PARD3Q8TEW0 1356 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 PTMSP20962 102 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 TMF1P82094 1093 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 ITPRIPQ8IWB1 547 aa10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.97□□□□□ -0.652e-26■■□□□ 11.8
HNRNPC-201ENST00000336053 EIF3AQ14152 1382 aaKnown RBP10.97□□□□□ -0.65
HNRNPC-201ENST00000336053 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
HNRNPC-201ENST00000336053 ZSCAN23Q3MJ62 389 aa10.96□□□□□ -0.65
HNRNPC-201ENST00000336053 CCDC39Q9UFE4 941 aa10.96□□□□□ -0.65
HNRNPC-201ENST00000336053 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 AEBP1Q8IUX7 1158 aa10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 CEP170Q5SW79 1584 aa10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 ATP2B3Q16720 1220 aa10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 UTP14CQ5TAP6 766 aaKnown RBP10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 CHAMP1Q96JM3 812 aa10.96□□□□□ -0.66
HNRNPC-201ENST00000336053 KIAA0586Q9BVV6 1533 aa10.95□□□□□ -0.66
HNRNPC-201ENST00000336053 KCNJ4P48050 445 aa10.95□□□□□ -0.66
HNRNPC-201ENST00000336053 KLHL40Q2TBA0 621 aa10.95□□□□□ -0.66
HNRNPC-201ENST00000336053 PDCL2Q8N4E4 241 aa10.95□□□□□ -0.66
HNRNPC-201ENST00000336053 ZNF500O60304 480 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 U2AF2P26368 475 aaKnown RBP eCLIP10.94□□□□□ -0.666e-16■■■■■ 52.2
HNRNPC-201ENST00000336053 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 LETM1O95202 739 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 KIF20AO95235 890 aa10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 KIF3AQ9Y496 699 aa10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 CD2BP2O95400 341 aaKnown RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 TMEM51Q9NW97 253 aa10.94□□□□□ -0.66
HNRNPC-201ENST00000336053 NUP155O75694 1391 aa10.93□□□□□ -0.66
HNRNPC-201ENST00000336053 K7ELQ4 463 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-201ENST00000336053 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
HNRNPC-201ENST00000336053 TROQ12816 1431 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 SHANK2Q9UPX8 1470 aa10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 ERICH4A6NGS2 130 aa10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 TAF7LQ5H9L4 462 aa10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 IPO4Q8TEX9 1081 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 CHAF1AQ13111 956 aaPredicted RBP10.92□□□□□ -0.66
HNRNPC-201ENST00000336053 NOL8Q76FK4 1167 aaKnown RBP10.91□□□□□ -0.66
HNRNPC-201ENST00000336053 SMC5Q8IY18 1101 aa10.91□□□□□ -0.66
HNRNPC-201ENST00000336053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.91□□□□□ -0.66
HNRNPC-201ENST00000336053 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
HNRNPC-201ENST00000336053 MRC2Q9UBG0 1479 aa10.91□□□□□ -0.66
HNRNPC-201ENST00000336053 PTPRGP23470 1445 aa10.9□□□□□ -0.66
HNRNPC-201ENST00000336053 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-201ENST00000336053 MYRIPQ8NFW9 859 aa10.9□□□□□ -0.66
HNRNPC-201ENST00000336053 ANKRD45Q5TZF3 282 aa10.9□□□□□ -0.66
HNRNPC-201ENST00000336053 LAMC1P11047 1609 aa10.9□□□□□ -0.66
HNRNPC-201ENST00000336053 RARSP54136 660 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 HMGN5P82970 282 aaKnown RBP10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 PKP1Q13835 747 aa10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 SMC4Q9NTJ3 1288 aa10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 PRG4Q92954 1404 aaPredicted RBP10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
HNRNPC-201ENST00000336053 BLMP54132 1417 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 DZIP1LQ8IYY4 767 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 ZMYM4Q5VZL5 1548 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 ZNF608Q9ULD9 1512 aaPredicted RBP10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 EIF4G3O43432 1585 aaKnown RBP10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 NOLC1Q14978 699 aaKnown RBP eCLIP10.88□□□□□ -0.671e-8■■■□□ 17.6
HNRNPC-201ENST00000336053 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 ABCC10Q5T3U5 1492 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 IFT140Q96RY7 1462 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 NLRP1Q9C000 1473 aa10.88□□□□□ -0.67
HNRNPC-201ENST00000336053 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
HNRNPC-201ENST00000336053 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
HNRNPC-201ENST00000336053 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
HNRNPC-201ENST00000336053 ZKSCAN2Q63HK3 967 aa10.87□□□□□ -0.67
HNRNPC-201ENST00000336053 ABCA8O94911 1581 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 APBB1O00213 710 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 ARHGEF5Q12774 1597 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 MCM5P33992 734 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 TNNT3P45378 269 aaPredicted RBP10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 ZNF445P59923 1031 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 NUCB2P80303 420 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 ZNF521Q96K83 1311 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 MVPQ14764 893 aaKnown RBP10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 SPC24Q8NBT2 197 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 SNX21Q969T3 373 aa10.86□□□□□ -0.67
HNRNPC-201ENST00000336053 PLEKHH2Q8IVE3 1493 aa10.85□□□□□ -0.67
HNRNPC-201ENST00000336053 KIF16BQ96L93 1317 aa10.85□□□□□ -0.67
HNRNPC-201ENST00000336053 TMEM63CQ9P1W3 806 aa10.85□□□□□ -0.67
HNRNPC-201ENST00000336053 ANKRD50Q9ULJ7 1429 aa10.85□□□□□ -0.67
HNRNPC-201ENST00000336053 INSRP06213 1382 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms