RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
LMO1-201ENST00000335790 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
LMO1-201ENST00000335790 ZBED9Q6R2W3 1325 aa18.29■□□□□ 0.52
LMO1-201ENST00000335790 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
LMO1-201ENST00000335790 TECPR2O15040 1411 aa18.29■□□□□ 0.52
LMO1-201ENST00000335790 SIRT1Q96EB6 747 aa18.27■□□□□ 0.52
LMO1-201ENST00000335790 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
LMO1-201ENST00000335790 CPS1P31327 1500 aa18.26■□□□□ 0.51
LMO1-201ENST00000335790 MED14O60244 1454 aa18.26■□□□□ 0.51
LMO1-201ENST00000335790 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
LMO1-201ENST00000335790 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
LMO1-201ENST00000335790 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
LMO1-201ENST00000335790 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
LMO1-201ENST00000335790 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
LMO1-201ENST00000335790 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
LMO1-201ENST00000335790 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
LMO1-201ENST00000335790 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
LMO1-201ENST00000335790 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
LMO1-201ENST00000335790 STK26Q9P289 416 aa18.21■□□□□ 0.51
LMO1-201ENST00000335790 METP08581 1390 aa18.2■□□□□ 0.5
LMO1-201ENST00000335790 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
LMO1-201ENST00000335790 CNGB1Q14028 1251 aaPredicted RBP18.2■□□□□ 0.5
LMO1-201ENST00000335790 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
LMO1-201ENST00000335790 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
LMO1-201ENST00000335790 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
LMO1-201ENST00000335790 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
LMO1-201ENST00000335790 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
LMO1-201ENST00000335790 NSD2O96028 1365 aa18.18■□□□□ 0.5
LMO1-201ENST00000335790 POGKQ9P215 609 aa18.18■□□□□ 0.5
LMO1-201ENST00000335790 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
LMO1-201ENST00000335790 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
LMO1-201ENST00000335790 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
LMO1-201ENST00000335790 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
LMO1-201ENST00000335790 LTKP29376 864 aa18.16■□□□□ 0.5
LMO1-201ENST00000335790 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
LMO1-201ENST00000335790 THEMISQ8N1K5 641 aaPredicted RBP18.14■□□□□ 0.49
LMO1-201ENST00000335790 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
LMO1-201ENST00000335790 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
LMO1-201ENST00000335790 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
LMO1-201ENST00000335790 MINK1Q8N4C8 1332 aaPredicted RBP18.13■□□□□ 0.49
LMO1-201ENST00000335790 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
LMO1-201ENST00000335790 ATP7BP35670 1465 aa18.13■□□□□ 0.49
LMO1-201ENST00000335790 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
LMO1-201ENST00000335790 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
LMO1-201ENST00000335790 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
LMO1-201ENST00000335790 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
LMO1-201ENST00000335790 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
LMO1-201ENST00000335790 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
LMO1-201ENST00000335790 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
LMO1-201ENST00000335790 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
LMO1-201ENST00000335790 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
LMO1-201ENST00000335790 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
LMO1-201ENST00000335790 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
LMO1-201ENST00000335790 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
LMO1-201ENST00000335790 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
LMO1-201ENST00000335790 PTCH1Q13635 1447 aa18.08■□□□□ 0.49
LMO1-201ENST00000335790 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
LMO1-201ENST00000335790 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
LMO1-201ENST00000335790 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
LMO1-201ENST00000335790 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
LMO1-201ENST00000335790 WASLO00401 505 aaPredicted RBP18.07■□□□□ 0.48
LMO1-201ENST00000335790 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
LMO1-201ENST00000335790 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
LMO1-201ENST00000335790 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
LMO1-201ENST00000335790 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
LMO1-201ENST00000335790 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
LMO1-201ENST00000335790 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
LMO1-201ENST00000335790 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
LMO1-201ENST00000335790 UBAP1LF5GYI3 381 aa18.05■□□□□ 0.48
LMO1-201ENST00000335790 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
LMO1-201ENST00000335790 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
LMO1-201ENST00000335790 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
LMO1-201ENST00000335790 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
LMO1-201ENST00000335790 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
LMO1-201ENST00000335790 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
LMO1-201ENST00000335790 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
LMO1-201ENST00000335790 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMO1-201ENST00000335790 BCANQ96GW7 911 aa18.01■□□□□ 0.47
LMO1-201ENST00000335790 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
LMO1-201ENST00000335790 NEFLP07196 543 aa18■□□□□ 0.47
LMO1-201ENST00000335790 CABP1Q9NZU7 370 aa18■□□□□ 0.47
LMO1-201ENST00000335790 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
LMO1-201ENST00000335790 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
LMO1-201ENST00000335790 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
LMO1-201ENST00000335790 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
LMO1-201ENST00000335790 IQSEC2Q5JU85 1478 aa17.99■□□□□ 0.47
LMO1-201ENST00000335790 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
LMO1-201ENST00000335790 FYB1O15117 783 aa17.98■□□□□ 0.47
LMO1-201ENST00000335790 NGEFQ8N5V2 710 aa17.98■□□□□ 0.47
LMO1-201ENST00000335790 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
LMO1-201ENST00000335790 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
LMO1-201ENST00000335790 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
LMO1-201ENST00000335790 AMOTL2Q9Y2J4 779 aa17.97■□□□□ 0.47
LMO1-201ENST00000335790 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
LMO1-201ENST00000335790 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
LMO1-201ENST00000335790 FKBP8Q14318 412 aa17.96■□□□□ 0.47
LMO1-201ENST00000335790 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
LMO1-201ENST00000335790 ANKLE2Q86XL3 938 aa17.95■□□□□ 0.46
LMO1-201ENST00000335790 ZNF521Q96K83 1311 aa17.95■□□□□ 0.46
LMO1-201ENST00000335790 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms