RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 PIK3C2GO75747 1445 aa38.59■■■■□ 3.77
RNF220-201ENST00000335497 RXRBP28702 533 aa38.59■■■■□ 3.77
RNF220-201ENST00000335497 ABCC11Q96J66 1382 aa38.57■■■■□ 3.77
RNF220-201ENST00000335497 STK26Q9P289 416 aa38.57■■■■□ 3.76
RNF220-201ENST00000335497 C8orf37Q96NL8 207 aa38.54■■■■□ 3.76
RNF220-201ENST00000335497 CDK12Q9NYV4 1490 aaPredicted RBP38.54■■■■□ 3.76
RNF220-201ENST00000335497 KNDC1Q76NI1 1749 aa38.53■■■■□ 3.76
RNF220-201ENST00000335497 TMEM132EQ6IEE7 984 aa38.52■■■■□ 3.76
RNF220-201ENST00000335497 WAPLQ7Z5K2 1190 aa38.52■■■■□ 3.76
RNF220-201ENST00000335497 ESCO1Q5FWF5 840 aa38.5■■■■□ 3.75
RNF220-201ENST00000335497 NPHP3Q7Z494 1330 aa38.49■■■■□ 3.75
RNF220-201ENST00000335497 YTHDC2Q9H6S0 1430 aaKnown RBP38.47■■■■□ 3.75
RNF220-201ENST00000335497 ADAMTS2O95450 1211 aa38.46■■■■□ 3.75
RNF220-201ENST00000335497 C14orf93Q9H972 538 aaKnown RBP38.46■■■■□ 3.75
RNF220-201ENST00000335497 RAB3GAP2Q9H2M9 1393 aa38.45■■■■□ 3.75
RNF220-201ENST00000335497 SIRT1Q96EB6 747 aa38.45■■■■□ 3.75
RNF220-201ENST00000335497 NRXN1Q9ULB1 1477 aa38.45■■■■□ 3.75
RNF220-201ENST00000335497 PLEKHH1Q9ULM0 1364 aa38.44■■■■□ 3.74
RNF220-201ENST00000335497 NGLY1Q96IV0 654 aa38.44■■■■□ 3.74
RNF220-201ENST00000335497 QTRT2Q9H974 415 aaKnown RBP38.44■■■■□ 3.74
RNF220-201ENST00000335497 MYOM2P54296 1465 aa38.43■■■■□ 3.74
RNF220-201ENST00000335497 COL22A1Q8NFW1 1626 aaPredicted RBP38.43■■■■□ 3.74
RNF220-201ENST00000335497 UPF1Q92900 1129 aaKnown RBP eCLIP38.42■■■■□ 3.74
RNF220-201ENST00000335497 RBM6P78332 1123 aaKnown RBP38.41■■■■□ 3.74
RNF220-201ENST00000335497 PXDNQ92626 1479 aa38.41■■■■□ 3.74
RNF220-201ENST00000335497 FOXO3O43524 673 aa38.39■■■■□ 3.74
RNF220-201ENST00000335497 DHX57Q6P158 1386 aaKnown RBP38.36■■■■□ 3.73
RNF220-201ENST00000335497 FMN2Q9NZ56 1722 aa38.36■■■■□ 3.73
RNF220-201ENST00000335497 NUTM2FA1L443 756 aa38.36■■■■□ 3.73
RNF220-201ENST00000335497 CFAP70Q5T0N1 1121 aa38.36■■■■□ 3.73
RNF220-201ENST00000335497 FNBP4Q8N3X1 1017 aaPredicted RBP38.33■■■■□ 3.73
RNF220-201ENST00000335497 RGS12O14924 1447 aa38.31■■■■□ 3.72
RNF220-201ENST00000335497 XPCQ01831 940 aaPredicted RBP38.31■■■■□ 3.72
RNF220-201ENST00000335497 USP21Q9UK80 565 aa38.31■■■■□ 3.72
RNF220-201ENST00000335497 KIF1AQ12756 1690 aa38.28■■■■□ 3.72
RNF220-201ENST00000335497 TRPC5Q9UL62 973 aaPredicted RBP38.27■■■■□ 3.72
RNF220-201ENST00000335497 HRCP23327 699 aa38.23■■■■□ 3.71
RNF220-201ENST00000335497 DLC1Q96QB1 1528 aa38.22■■■■□ 3.71
RNF220-201ENST00000335497 PRAM1Q96QH2 718 aa38.22■■■■□ 3.71
RNF220-201ENST00000335497 SPATA31A3Q5VYP0 1347 aa38.21■■■■□ 3.71
RNF220-201ENST00000335497 MARF1Q9Y4F3 1742 aaKnown RBP38.21■■■■□ 3.71
RNF220-201ENST00000335497 ATRNO75882 1429 aa38.2■■■■□ 3.71
RNF220-201ENST00000335497 KRT28Q7Z3Y7 464 aa38.18■■■■□ 3.7
RNF220-201ENST00000335497 PHF8Q9UPP1 1060 aa38.18■■■■□ 3.7
RNF220-201ENST00000335497 RGPD8O14715 1765 aaPredicted RBP38.16■■■■□ 3.7
RNF220-201ENST00000335497 ADGRB1O14514 1584 aa38.16■■■■□ 3.7
RNF220-201ENST00000335497 STAC3Q96MF2 364 aa38.16■■■■□ 3.7
RNF220-201ENST00000335497 POGKQ9P215 609 aa38.16■■■■□ 3.7
RNF220-201ENST00000335497 SAFB2Q14151 953 aaKnown RBP eCLIP38.15■■■■□ 3.7
RNF220-201ENST00000335497 BCL9LQ86UU0 1499 aa38.15■■■■□ 3.7
RNF220-201ENST00000335497 PSME1Q06323 249 aa38.13■■■■□ 3.69
RNF220-201ENST00000335497 DCAF11Q8TEB1 546 aa38.11■■■■□ 3.69
RNF220-201ENST00000335497 KDM2AQ9Y2K7 1162 aa38.1■■■■□ 3.69
RNF220-201ENST00000335497 ANKARQ7Z5J8 1434 aa38.1■■■■□ 3.69
RNF220-201ENST00000335497 ADGRB2O60241 1585 aa38.1■■■■□ 3.69
RNF220-201ENST00000335497 TNS3Q68CZ2 1445 aa38.08■■■■□ 3.69
RNF220-201ENST00000335497 TRAK1Q9UPV9 953 aa38.07■■■■□ 3.68
RNF220-201ENST00000335497 SBNO1A3KN83 1393 aa38.06■■■■□ 3.68
RNF220-201ENST00000335497 ATAD2Q6PL18 1390 aa38.06■■■■□ 3.68
RNF220-201ENST00000335497 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.04■■■■□ 3.68
RNF220-201ENST00000335497 USP32Q8NFA0 1604 aa38.03■■■■□ 3.68
RNF220-201ENST00000335497 SLIT2O94813 1529 aa38.02■■■■□ 3.68
RNF220-201ENST00000335497 GJD4Q96KN9 370 aaPredicted RBP38.02■■■■□ 3.68
RNF220-201ENST00000335497 UNC5CLQ8IV45 518 aa38.01■■■■□ 3.68
RNF220-201ENST00000335497 EIF3AQ14152 1382 aaKnown RBP38■■■■□ 3.67
RNF220-201ENST00000335497 ARHGEF10O15013 1369 aa37.99■■■■□ 3.67
RNF220-201ENST00000335497 PMFBP1Q8TBY8 1022 aa37.98■■■■□ 3.67
RNF220-201ENST00000335497 HIRIP3Q9BW71 556 aaPredicted RBP37.98■■■■□ 3.67
RNF220-201ENST00000335497 HAP1P54257 671 aaPredicted RBP37.97■■■■□ 3.67
RNF220-201ENST00000335497 MINK1Q8N4C8 1332 aaPredicted RBP37.96■■■■□ 3.67
RNF220-201ENST00000335497 CABLES1Q8TDN4 633 aa37.94■■■■□ 3.66
RNF220-201ENST00000335497 WASLO00401 505 aaPredicted RBP37.93■■■■□ 3.66
RNF220-201ENST00000335497 LMOD2Q6P5Q4 547 aa37.93■■■■□ 3.66
RNF220-201ENST00000335497 TULP4Q9NRJ4 1543 aa37.92■■■■□ 3.66
RNF220-201ENST00000335497 EP400Q96L91 3159 aa37.91■■■■□ 3.66
RNF220-201ENST00000335497 RALGAPBQ86X10 1494 aa37.9■■■■□ 3.66
RNF220-201ENST00000335497 PRR36Q9H6K5 1346 aa37.9■■■■□ 3.66
RNF220-201ENST00000335497 ABCA3Q99758 1704 aa37.89■■■■□ 3.66
RNF220-201ENST00000335497 GLI3P10071 1580 aa37.89■■■■□ 3.66
RNF220-201ENST00000335497 GPRASP1Q5JY77 1395 aa37.88■■■■□ 3.65
RNF220-201ENST00000335497 TRPM3Q9HCF6 1732 aaPredicted RBP37.87■■■■□ 3.65
RNF220-201ENST00000335497 ARHGEF28Q8N1W1 1705 aaKnown RBP37.85■■■■□ 3.65
RNF220-201ENST00000335497 NWD2Q9ULI1 1742 aa37.85■■■■□ 3.65
RNF220-201ENST00000335497 PLEKHG5O94827 1062 aa37.84■■■■□ 3.65
RNF220-201ENST00000335497 PLCH1Q4KWH8 1693 aa37.83■■■■□ 3.65
RNF220-201ENST00000335497 VPS72Q15906 364 aa37.83■■■■□ 3.65
RNF220-201ENST00000335497 CCDC125Q86Z20 511 aa37.83■■■■□ 3.65
RNF220-201ENST00000335497 ALS2Q96Q42 1657 aa37.81■■■■□ 3.64
RNF220-201ENST00000335497 NGDNQ8NEJ9 315 aaKnown RBP37.79■■■■□ 3.64
RNF220-201ENST00000335497 FAM83GA6ND36 823 aa37.78■■■■□ 3.64
RNF220-201ENST00000335497 KIAA1210Q9ULL0 1709 aa37.78■■■■□ 3.64
RNF220-201ENST00000335497 ATP7BP35670 1465 aa37.75■■■■□ 3.63
RNF220-201ENST00000335497 ITSN1Q15811 1721 aa37.75■■■■□ 3.63
RNF220-201ENST00000335497 NUDT16Q96DE0 195 aaKnown RBP37.74■■■■□ 3.63
RNF220-201ENST00000335497 ONECUT3O60422 494 aaPredicted RBP37.73■■■■□ 3.63
RNF220-201ENST00000335497 SEPT12Q8IYM1 358 aa37.72■■■■□ 3.63
RNF220-201ENST00000335497 CCDC9Q9Y3X0 531 aaKnown RBP37.72■■■■□ 3.63
RNF220-201ENST00000335497 BRWD3Q6RI45 1802 aa37.7■■■■□ 3.63
RNF220-201ENST00000335497 CDK19Q9BWU1 502 aa37.69■■■■□ 3.62
RNF220-201ENST00000335497 PAK3O75914 559 aaPredicted RBP37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms