RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 NSD2O96028 1365 aa30.93■■■□□ 2.54
ITM2C-203ENST00000335005 NINLQ9Y2I6 1382 aa30.93■■■□□ 2.54
ITM2C-203ENST00000335005 PTPRMP28827 1452 aa30.92■■■□□ 2.54
ITM2C-203ENST00000335005 TRMT2AQ8IZ69 625 aaKnown RBP30.92■■■□□ 2.54
ITM2C-203ENST00000335005 ANP32EQ9BTT0 268 aa30.91■■■□□ 2.54
ITM2C-203ENST00000335005 SPATA31D1Q6ZQQ2 1576 aa30.91■■■□□ 2.54
ITM2C-203ENST00000335005 SLFN5Q08AF3 891 aa30.89■■■□□ 2.54
ITM2C-203ENST00000335005 NUTM2DQ5VT03 806 aaPredicted RBP30.89■■■□□ 2.54
ITM2C-203ENST00000335005 CGNL1Q0VF96 1302 aa30.88■■■□□ 2.53
ITM2C-203ENST00000335005 ALKQ9UM73 1620 aa30.88■■■□□ 2.53
ITM2C-203ENST00000335005 MORC1Q86VD1 984 aa30.87■■■□□ 2.53
ITM2C-203ENST00000335005 ARHGEF40Q8TER5 1519 aa30.86■■■□□ 2.53
ITM2C-203ENST00000335005 YTHDC2Q9H6S0 1430 aaKnown RBP30.85■■■□□ 2.53
ITM2C-203ENST00000335005 CCDC146Q8IYE0 955 aa30.84■■■□□ 2.53
ITM2C-203ENST00000335005 KIF13AQ9H1H9 1805 aa30.83■■■□□ 2.53
ITM2C-203ENST00000335005 APAF1O14727 1248 aa30.83■■■□□ 2.53
ITM2C-203ENST00000335005 ANKRD26Q9UPS8 1709 aa30.83■■■□□ 2.53
ITM2C-203ENST00000335005 NKTRP30414 1462 aaKnown RBP30.82■■■□□ 2.52
ITM2C-203ENST00000335005 SETD1AO15047 1707 aaKnown RBP30.81■■■□□ 2.52
ITM2C-203ENST00000335005 IQSEC2Q5JU85 1478 aa30.81■■■□□ 2.52
ITM2C-203ENST00000335005 FBXO31Q5XUX0 539 aaPredicted RBP30.81■■■□□ 2.52
ITM2C-203ENST00000335005 MSH5O43196 834 aa30.8■■■□□ 2.52
ITM2C-203ENST00000335005 PLIN1O60240 522 aa30.8■■■□□ 2.52
ITM2C-203ENST00000335005 DLC1Q96QB1 1528 aa30.79■■■□□ 2.52
ITM2C-203ENST00000335005 ATAD2Q6PL18 1390 aa30.79■■■□□ 2.52
ITM2C-203ENST00000335005 ABCC11Q96J66 1382 aa30.78■■■□□ 2.52
ITM2C-203ENST00000335005 A2ML1A8K2U0 1454 aa30.78■■■□□ 2.52
ITM2C-203ENST00000335005 E9PSI1 815 aa30.78■■■□□ 2.52
ITM2C-203ENST00000335005 CRBNQ96SW2 442 aa30.77■■■□□ 2.52
ITM2C-203ENST00000335005 MED14O60244 1454 aa30.75■■■□□ 2.51
ITM2C-203ENST00000335005 CABP2Q9NPB3 220 aa30.75■■■□□ 2.51
ITM2C-203ENST00000335005 A0A1W2PP64 1363 aa30.74■■■□□ 2.51
ITM2C-203ENST00000335005 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.73■■■□□ 2.51
ITM2C-203ENST00000335005 NCBP3Q53F19 620 aaKnown RBP30.72■■■□□ 2.51
ITM2C-203ENST00000335005 SPINK5Q9NQ38 1064 aaPredicted RBP30.72■■■□□ 2.51
ITM2C-203ENST00000335005 CD163L1Q9NR16 1453 aa30.71■■■□□ 2.51
ITM2C-203ENST00000335005 TCERG1O14776 1098 aaKnown RBP30.71■■■□□ 2.51
ITM2C-203ENST00000335005 RUNDC1Q96C34 613 aa30.7■■■□□ 2.51
ITM2C-203ENST00000335005 CFAP53Q96M91 514 aa30.7■■■□□ 2.51
ITM2C-203ENST00000335005 STK26Q9P289 416 aa30.7■■■□□ 2.5
ITM2C-203ENST00000335005 MTHFSP49914 203 aa30.69■■■□□ 2.5
ITM2C-203ENST00000335005 ADGRB2O60241 1585 aa30.68■■■□□ 2.5
ITM2C-203ENST00000335005 PRAM1Q96QH2 718 aa30.68■■■□□ 2.5
ITM2C-203ENST00000335005 PHF23Q9BUL5 403 aaPredicted RBP30.68■■■□□ 2.5
ITM2C-203ENST00000335005 RIMS2Q9UQ26 1411 aa30.68■■■□□ 2.5
ITM2C-203ENST00000335005 C20orf194Q5TEA3 1177 aa30.67■■■□□ 2.5
ITM2C-203ENST00000335005 NLRP1Q9C000 1473 aa30.67■■■□□ 2.5
ITM2C-203ENST00000335005 WWC1Q8IX03 1113 aa30.67■■■□□ 2.5
ITM2C-203ENST00000335005 KIF20BQ96Q89 1820 aa30.66■■■□□ 2.5
ITM2C-203ENST00000335005 NRXN3Q9Y4C0 1643 aa30.66■■■□□ 2.5
ITM2C-203ENST00000335005 SRPK2P78362 688 aaKnown RBP30.65■■■□□ 2.5
ITM2C-203ENST00000335005 SAFB2Q14151 953 aaKnown RBP eCLIP30.65■■■□□ 2.5
ITM2C-203ENST00000335005 MS4A1P11836 297 aa30.65■■■□□ 2.5
ITM2C-203ENST00000335005 TNNT2P45379 298 aaPredicted RBP30.65■■■□□ 2.5
ITM2C-203ENST00000335005 STAG3Q9UJ98 1225 aa30.64■■■□□ 2.5
ITM2C-203ENST00000335005 POGKQ9P215 609 aa30.63■■■□□ 2.49
ITM2C-203ENST00000335005 CCDC27Q2M243 656 aa30.63■■■□□ 2.49
ITM2C-203ENST00000335005 TERF2IPQ9NYB0 399 aa30.63■■■□□ 2.49
ITM2C-203ENST00000335005 DMRT2Q9Y5R5 561 aa30.63■■■□□ 2.49
ITM2C-203ENST00000335005 COL3A1P02461 1466 aaPredicted RBP30.62■■■□□ 2.49
ITM2C-203ENST00000335005 MINK1Q8N4C8 1332 aaPredicted RBP30.62■■■□□ 2.49
ITM2C-203ENST00000335005 KDM2BQ8NHM5 1336 aa30.61■■■□□ 2.49
ITM2C-203ENST00000335005 KNDC1Q76NI1 1749 aa30.6■■■□□ 2.49
ITM2C-203ENST00000335005 WDR63Q8IWG1 891 aa30.58■■■□□ 2.49
ITM2C-203ENST00000335005 TCP11L2Q8N4U5 519 aa30.58■■■□□ 2.49
ITM2C-203ENST00000335005 ATP7BP35670 1465 aa30.57■■■□□ 2.48
ITM2C-203ENST00000335005 CDK19Q9BWU1 502 aa30.54■■■□□ 2.48
ITM2C-203ENST00000335005 CENPQQ7L2Z9 268 aaPredicted RBP30.53■■■□□ 2.48
ITM2C-203ENST00000335005 FYB1O15117 783 aa30.53■■■□□ 2.48
ITM2C-203ENST00000335005 ZMYM3Q14202 1370 aa30.52■■■□□ 2.48
ITM2C-203ENST00000335005 HDGFL2Q7Z4V5 671 aaPredicted RBP30.52■■■□□ 2.48
ITM2C-203ENST00000335005 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.52■■■□□ 2.48
ITM2C-203ENST00000335005 BCAR3O75815 825 aa30.49■■■□□ 2.47
ITM2C-203ENST00000335005 PDE3AQ14432 1141 aa30.49■■■□□ 2.47
ITM2C-203ENST00000335005 CDC42BPGQ6DT37 1551 aa30.49■■■□□ 2.47
ITM2C-203ENST00000335005 GGNBP2Q9H3C7 697 aa30.48■■■□□ 2.47
ITM2C-203ENST00000335005 TECPR2O15040 1411 aa30.48■■■□□ 2.47
ITM2C-203ENST00000335005 PNPLA6Q8IY17 1366 aa30.48■■■□□ 2.47
ITM2C-203ENST00000335005 SENP3Q9H4L4 574 aaPredicted RBP30.48■■■□□ 2.47
ITM2C-203ENST00000335005 UBR1Q8IWV7 1749 aa30.47■■■□□ 2.47
ITM2C-203ENST00000335005 ANP32AP39687 249 aaKnown RBP30.47■■■□□ 2.47
ITM2C-203ENST00000335005 MLECQ14165 292 aa30.47■■■□□ 2.47
ITM2C-203ENST00000335005 BACH2Q9BYV9 841 aa30.46■■■□□ 2.47
ITM2C-203ENST00000335005 CPS1P31327 1500 aa30.46■■■□□ 2.47
ITM2C-203ENST00000335005 PDE4AP27815 886 aa30.46■■■□□ 2.47
ITM2C-203ENST00000335005 FAM135BQ49AJ0 1406 aa30.45■■■□□ 2.47
ITM2C-203ENST00000335005 U2AF1L5P0DN76 240 aaPredicted RBP30.45■■■□□ 2.47
ITM2C-203ENST00000335005 U2AF1Q01081 240 aaKnown RBP eCLIP30.45■■■□□ 2.47
ITM2C-203ENST00000335005 ERICH6Q7L0X2 663 aa30.45■■■□□ 2.47
ITM2C-203ENST00000335005 RRP7AQ9Y3A4 280 aaKnown RBP30.45■■■□□ 2.47
ITM2C-203ENST00000335005 SIRT1Q96EB6 747 aa30.43■■■□□ 2.46
ITM2C-203ENST00000335005 CABP1Q9NZU7 370 aa30.43■■■□□ 2.46
ITM2C-203ENST00000335005 TNRQ92752 1358 aa30.42■■■□□ 2.46
ITM2C-203ENST00000335005 PLEKHF1Q96S99 279 aa30.42■■■□□ 2.46
ITM2C-203ENST00000335005 NEUROD2Q15784 382 aa30.41■■■□□ 2.46
ITM2C-203ENST00000335005 IPO9Q96P70 1041 aaKnown RBP30.41■■■□□ 2.46
ITM2C-203ENST00000335005 ESF1Q9H501 851 aaKnown RBP30.41■■■□□ 2.46
ITM2C-203ENST00000335005 CPSF1Q10570 1443 aaKnown RBP30.4■■■□□ 2.46
ITM2C-203ENST00000335005 METP08581 1390 aa30.4■■■□□ 2.46
ITM2C-203ENST00000335005 WAPLQ7Z5K2 1190 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms