RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 C14orf93Q9H972 538 aaKnown RBP16.51■□□□□ 0.23
C9orf85-201ENST00000334731 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
C9orf85-201ENST00000334731 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
C9orf85-201ENST00000334731 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
C9orf85-201ENST00000334731 WAPLQ7Z5K2 1190 aa16.5■□□□□ 0.23
C9orf85-201ENST00000334731 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
C9orf85-201ENST00000334731 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
C9orf85-201ENST00000334731 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
C9orf85-201ENST00000334731 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
C9orf85-201ENST00000334731 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
C9orf85-201ENST00000334731 CFAP70Q5T0N1 1121 aa16.48■□□□□ 0.23
C9orf85-201ENST00000334731 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
C9orf85-201ENST00000334731 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
C9orf85-201ENST00000334731 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
C9orf85-201ENST00000334731 TECPR2O15040 1411 aa16.47■□□□□ 0.23
C9orf85-201ENST00000334731 IFT172Q9UG01 1749 aa16.47■□□□□ 0.23
C9orf85-201ENST00000334731 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
C9orf85-201ENST00000334731 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
C9orf85-201ENST00000334731 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
C9orf85-201ENST00000334731 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
C9orf85-201ENST00000334731 MYOM2P54296 1465 aa16.45■□□□□ 0.22
C9orf85-201ENST00000334731 LRP6O75581 1613 aa16.45■□□□□ 0.22
C9orf85-201ENST00000334731 DHX57Q6P158 1386 aaKnown RBP16.43■□□□□ 0.22
C9orf85-201ENST00000334731 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
C9orf85-201ENST00000334731 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
C9orf85-201ENST00000334731 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
C9orf85-201ENST00000334731 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
C9orf85-201ENST00000334731 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
C9orf85-201ENST00000334731 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
C9orf85-201ENST00000334731 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
C9orf85-201ENST00000334731 SOS2Q07890 1332 aaPredicted RBP16.42■□□□□ 0.22
C9orf85-201ENST00000334731 NHSL1Q5SYE7 1610 aa16.41■□□□□ 0.22
C9orf85-201ENST00000334731 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
C9orf85-201ENST00000334731 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
C9orf85-201ENST00000334731 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
C9orf85-201ENST00000334731 CDC42BPGQ6DT37 1551 aa16.39■□□□□ 0.21
C9orf85-201ENST00000334731 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
C9orf85-201ENST00000334731 FOXO3O43524 673 aa16.38■□□□□ 0.21
C9orf85-201ENST00000334731 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
C9orf85-201ENST00000334731 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
C9orf85-201ENST00000334731 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
C9orf85-201ENST00000334731 LAMC1P11047 1609 aa16.37■□□□□ 0.21
C9orf85-201ENST00000334731 DSG3P32926 999 aa16.36■□□□□ 0.21
C9orf85-201ENST00000334731 SAFB2Q14151 953 aaKnown RBP eCLIP16.36■□□□□ 0.21
C9orf85-201ENST00000334731 POGKQ9P215 609 aa16.36■□□□□ 0.21
C9orf85-201ENST00000334731 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
C9orf85-201ENST00000334731 CAPN15O75808 1086 aa16.35■□□□□ 0.21
C9orf85-201ENST00000334731 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
C9orf85-201ENST00000334731 TRAK1Q9UPV9 953 aa16.34■□□□□ 0.21
C9orf85-201ENST00000334731 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
C9orf85-201ENST00000334731 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
C9orf85-201ENST00000334731 AFF2P51816 1311 aa16.32■□□□□ 0.2
C9orf85-201ENST00000334731 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
C9orf85-201ENST00000334731 DLC1Q96QB1 1528 aa16.32■□□□□ 0.2
C9orf85-201ENST00000334731 PXDNQ92626 1479 aa16.31■□□□□ 0.2
C9orf85-201ENST00000334731 PHF8Q9UPP1 1060 aa16.3■□□□□ 0.2
C9orf85-201ENST00000334731 RXRBP28702 533 aa16.29■□□□□ 0.2
C9orf85-201ENST00000334731 NGLY1Q96IV0 654 aa16.29■□□□□ 0.2
C9orf85-201ENST00000334731 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
C9orf85-201ENST00000334731 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
C9orf85-201ENST00000334731 QTRT2Q9H974 415 aaKnown RBP16.28■□□□□ 0.2
C9orf85-201ENST00000334731 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
C9orf85-201ENST00000334731 MINK1Q8N4C8 1332 aaPredicted RBP16.27■□□□□ 0.2
C9orf85-201ENST00000334731 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
C9orf85-201ENST00000334731 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
C9orf85-201ENST00000334731 PSME1Q06323 249 aa16.25■□□□□ 0.19
C9orf85-201ENST00000334731 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
C9orf85-201ENST00000334731 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
C9orf85-201ENST00000334731 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
C9orf85-201ENST00000334731 ANKARQ7Z5J8 1434 aa16.24■□□□□ 0.19
C9orf85-201ENST00000334731 COL22A1Q8NFW1 1626 aaPredicted RBP16.23■□□□□ 0.19
C9orf85-201ENST00000334731 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
C9orf85-201ENST00000334731 L3MBTL2Q969R5 705 aa16.23■□□□□ 0.19
C9orf85-201ENST00000334731 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
C9orf85-201ENST00000334731 USP21Q9UK80 565 aa16.23■□□□□ 0.19
C9orf85-201ENST00000334731 PRR36Q9H6K5 1346 aa16.22■□□□□ 0.19
C9orf85-201ENST00000334731 ADGRB2O60241 1585 aa16.21■□□□□ 0.19
C9orf85-201ENST00000334731 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
C9orf85-201ENST00000334731 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
C9orf85-201ENST00000334731 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
C9orf85-201ENST00000334731 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
C9orf85-201ENST00000334731 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
C9orf85-201ENST00000334731 TRPC5Q9UL62 973 aaPredicted RBP16.19■□□□□ 0.18
C9orf85-201ENST00000334731 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
C9orf85-201ENST00000334731 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
C9orf85-201ENST00000334731 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
C9orf85-201ENST00000334731 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
C9orf85-201ENST00000334731 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
C9orf85-201ENST00000334731 CDK19Q9BWU1 502 aa16.18■□□□□ 0.18
C9orf85-201ENST00000334731 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
C9orf85-201ENST00000334731 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
C9orf85-201ENST00000334731 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
C9orf85-201ENST00000334731 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
C9orf85-201ENST00000334731 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
C9orf85-201ENST00000334731 UPF1Q92900 1129 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf85-201ENST00000334731 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
C9orf85-201ENST00000334731 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
C9orf85-201ENST00000334731 ATRNO75882 1429 aa16.15■□□□□ 0.18
C9orf85-201ENST00000334731 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
C9orf85-201ENST00000334731 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms