RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.57
C9orf47-201ENST00000334490 TOM1L2Q6ZVM7 507 aa18.58■□□□□ 0.56
C9orf47-201ENST00000334490 WAPLQ7Z5K2 1190 aa18.58■□□□□ 0.56
C9orf47-201ENST00000334490 DNTTIP2Q5QJE6 756 aaKnown RBP18.57■□□□□ 0.56
C9orf47-201ENST00000334490 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
C9orf47-201ENST00000334490 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
C9orf47-201ENST00000334490 G3BP1Q13283 466 aaKnown RBP eCLIP18.56■□□□□ 0.56
C9orf47-201ENST00000334490 IFIT2P09913 472 aaKnown RBP18.55■□□□□ 0.56
C9orf47-201ENST00000334490 SMG6Q86US8 1419 aaKnown RBP18.55■□□□□ 0.56
C9orf47-201ENST00000334490 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
C9orf47-201ENST00000334490 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
C9orf47-201ENST00000334490 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
C9orf47-201ENST00000334490 GBP4Q96PP9 640 aa18.54■□□□□ 0.56
C9orf47-201ENST00000334490 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
C9orf47-201ENST00000334490 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
C9orf47-201ENST00000334490 VPS37DQ86XT2 251 aa18.53■□□□□ 0.56
C9orf47-201ENST00000334490 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
C9orf47-201ENST00000334490 NRDCO43847 1150 aa18.53■□□□□ 0.56
C9orf47-201ENST00000334490 CLSTN1O94985 981 aa18.53■□□□□ 0.56
C9orf47-201ENST00000334490 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
C9orf47-201ENST00000334490 ZC3H6P61129 1189 aaKnown RBP18.52■□□□□ 0.56
C9orf47-201ENST00000334490 RRS1Q15050 365 aaKnown RBP18.52■□□□□ 0.56
C9orf47-201ENST00000334490 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
C9orf47-201ENST00000334490 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
C9orf47-201ENST00000334490 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
C9orf47-201ENST00000334490 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
C9orf47-201ENST00000334490 ST18O60284 1047 aa18.52■□□□□ 0.55
C9orf47-201ENST00000334490 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
C9orf47-201ENST00000334490 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
C9orf47-201ENST00000334490 AMOTL2Q9Y2J4 779 aa18.5■□□□□ 0.55
C9orf47-201ENST00000334490 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
C9orf47-201ENST00000334490 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
C9orf47-201ENST00000334490 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
C9orf47-201ENST00000334490 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
C9orf47-201ENST00000334490 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
C9orf47-201ENST00000334490 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
C9orf47-201ENST00000334490 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
C9orf47-201ENST00000334490 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
C9orf47-201ENST00000334490 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
C9orf47-201ENST00000334490 ADGRF5Q8IZF2 1346 aa18.49■□□□□ 0.55
C9orf47-201ENST00000334490 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
C9orf47-201ENST00000334490 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
C9orf47-201ENST00000334490 ASXL2Q76L83 1435 aa18.47■□□□□ 0.55
C9orf47-201ENST00000334490 FAM177BA6PVY3 158 aa18.47■□□□□ 0.55
C9orf47-201ENST00000334490 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
C9orf47-201ENST00000334490 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
C9orf47-201ENST00000334490 CABP4P57796 275 aa18.47■□□□□ 0.55
C9orf47-201ENST00000334490 ATP10BO94823 1461 aa18.46■□□□□ 0.55
C9orf47-201ENST00000334490 FAM161AQ3B820 660 aa18.46■□□□□ 0.55
C9orf47-201ENST00000334490 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
C9orf47-201ENST00000334490 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
C9orf47-201ENST00000334490 APPP05067 770 aa18.46■□□□□ 0.55
C9orf47-201ENST00000334490 FBXW7Q969H0 707 aa18.46■□□□□ 0.54
C9orf47-201ENST00000334490 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.54
C9orf47-201ENST00000334490 FOXO3O43524 673 aa18.45■□□□□ 0.54
C9orf47-201ENST00000334490 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
C9orf47-201ENST00000334490 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
C9orf47-201ENST00000334490 LNPKQ9C0E8 428 aa18.44■□□□□ 0.54
C9orf47-201ENST00000334490 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
C9orf47-201ENST00000334490 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
C9orf47-201ENST00000334490 PDE4AP27815 886 aa18.43■□□□□ 0.54
C9orf47-201ENST00000334490 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
C9orf47-201ENST00000334490 RASSF8Q8NHQ8 419 aa18.43■□□□□ 0.54
C9orf47-201ENST00000334490 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
C9orf47-201ENST00000334490 DRC7Q8IY82 874 aa18.43■□□□□ 0.54
C9orf47-201ENST00000334490 GZF1Q9H116 711 aaPredicted RBP18.42■□□□□ 0.54
C9orf47-201ENST00000334490 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.42■□□□□ 0.54
C9orf47-201ENST00000334490 REC8O95072 547 aa18.42■□□□□ 0.54
C9orf47-201ENST00000334490 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
C9orf47-201ENST00000334490 NSD3Q9BZ95 1437 aa18.42■□□□□ 0.54
C9orf47-201ENST00000334490 GNAI3P08754 354 aa18.42■□□□□ 0.54
C9orf47-201ENST00000334490 ZKSCAN1P17029 563 aaPredicted RBP18.42■□□□□ 0.54
C9orf47-201ENST00000334490 CCDC34Q96HJ3 373 aa18.42■□□□□ 0.54
C9orf47-201ENST00000334490 PLCH2O75038 1416 aa18.41■□□□□ 0.54
C9orf47-201ENST00000334490 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
C9orf47-201ENST00000334490 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
C9orf47-201ENST00000334490 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
C9orf47-201ENST00000334490 TRIM34Q9BYJ4 488 aa18.4■□□□□ 0.54
C9orf47-201ENST00000334490 PTMSP20962 102 aa18.4■□□□□ 0.54
C9orf47-201ENST00000334490 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
C9orf47-201ENST00000334490 SYNE3Q6ZMZ3 975 aa18.4■□□□□ 0.54
C9orf47-201ENST00000334490 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
C9orf47-201ENST00000334490 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.54
C9orf47-201ENST00000334490 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.53
C9orf47-201ENST00000334490 ERC2O15083 957 aa18.39■□□□□ 0.53
C9orf47-201ENST00000334490 RAD21O60216 631 aa18.39■□□□□ 0.53
C9orf47-201ENST00000334490 MARCH6O60337 910 aa18.39■□□□□ 0.53
C9orf47-201ENST00000334490 AKAP17AQ02040 695 aaKnown RBP18.39■□□□□ 0.53
C9orf47-201ENST00000334490 ANO2Q9NQ90 1003 aa18.39■□□□□ 0.53
C9orf47-201ENST00000334490 SYAP1Q96A49 352 aaPredicted RBP18.38■□□□□ 0.53
C9orf47-201ENST00000334490 FCHSD2O94868 740 aa18.38■□□□□ 0.53
C9orf47-201ENST00000334490 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
C9orf47-201ENST00000334490 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
C9orf47-201ENST00000334490 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
C9orf47-201ENST00000334490 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
C9orf47-201ENST00000334490 SF3A1Q15459 793 aaKnown RBP18.38■□□□□ 0.53
C9orf47-201ENST00000334490 NOS1P29475 1434 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 NME9Q86XW9 330 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 AAMPQ13685 434 aa18.37■□□□□ 0.53
C9orf47-201ENST00000334490 CPLX2Q6PUV4 134 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms