RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 EVC2Q86UK5 1308 aa24.77■■□□□ 1.56
RFTN1-201ENST00000334133 MINK1Q8N4C8 1332 aaPredicted RBP24.77■■□□□ 1.56
RFTN1-201ENST00000334133 GLI2P10070 1586 aa24.76■■□□□ 1.55
RFTN1-201ENST00000334133 PDE4AP27815 886 aa24.76■■□□□ 1.55
RFTN1-201ENST00000334133 NOP58Q9Y2X3 529 aaKnown RBP24.76■■□□□ 1.55
RFTN1-201ENST00000334133 NEXMIFQ5QGS0 1516 aa24.75■■□□□ 1.55
RFTN1-201ENST00000334133 TCERG1O14776 1098 aaKnown RBP24.75■■□□□ 1.55
RFTN1-201ENST00000334133 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
RFTN1-201ENST00000334133 CGNL1Q0VF96 1302 aa24.74■■□□□ 1.55
RFTN1-201ENST00000334133 RICTORQ6R327 1708 aa24.74■■□□□ 1.55
RFTN1-201ENST00000334133 WWC1Q8IX03 1113 aa24.73■■□□□ 1.55
RFTN1-201ENST00000334133 TRMT2AQ8IZ69 625 aaKnown RBP24.73■■□□□ 1.55
RFTN1-201ENST00000334133 POLR3AO14802 1390 aaPredicted RBP24.72■■□□□ 1.55
RFTN1-201ENST00000334133 PRAM1Q96QH2 718 aa24.72■■□□□ 1.55
RFTN1-201ENST00000334133 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
RFTN1-201ENST00000334133 SLC52A1Q9NWF4 448 aa24.72■■□□□ 1.55
RFTN1-201ENST00000334133 TULP4Q9NRJ4 1543 aa24.71■■□□□ 1.55
RFTN1-201ENST00000334133 E9PSI1 815 aa24.71■■□□□ 1.55
RFTN1-201ENST00000334133 TCP11L2Q8N4U5 519 aa24.71■■□□□ 1.55
RFTN1-201ENST00000334133 GGNBP2Q9H3C7 697 aa24.71■■□□□ 1.55
RFTN1-201ENST00000334133 MYO5BQ9ULV0 1848 aa24.71■■□□□ 1.55
RFTN1-201ENST00000334133 POGKQ9P215 609 aa24.7■■□□□ 1.55
RFTN1-201ENST00000334133 PIK3C2BO00750 1634 aa24.7■■□□□ 1.54
RFTN1-201ENST00000334133 NBR1Q14596 966 aa24.69■■□□□ 1.54
RFTN1-201ENST00000334133 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.69■■□□□ 1.54
RFTN1-201ENST00000334133 IPO9Q96P70 1041 aaKnown RBP24.69■■□□□ 1.54
RFTN1-201ENST00000334133 NKTRP30414 1462 aaKnown RBP24.69■■□□□ 1.54
RFTN1-201ENST00000334133 TSPOAP1O95153 1857 aa24.69■■□□□ 1.54
RFTN1-201ENST00000334133 U2AF1L5P0DN76 240 aaPredicted RBP24.67■■□□□ 1.54
RFTN1-201ENST00000334133 U2AF1Q01081 240 aaKnown RBP eCLIP24.67■■□□□ 1.54
RFTN1-201ENST00000334133 BACH2Q9BYV9 841 aa24.67■■□□□ 1.54
RFTN1-201ENST00000334133 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
RFTN1-201ENST00000334133 FRAT1Q92837 279 aaPredicted RBP24.66■■□□□ 1.54
RFTN1-201ENST00000334133 RUNDC1Q96C34 613 aa24.66■■□□□ 1.54
RFTN1-201ENST00000334133 BCL2L13Q9BXK5 485 aa24.66■■□□□ 1.54
RFTN1-201ENST00000334133 ARHGAP31Q2M1Z3 1444 aa24.65■■□□□ 1.54
RFTN1-201ENST00000334133 ANKRD36BQ8N2N9 1353 aa24.64■■□□□ 1.54
RFTN1-201ENST00000334133 CANXP27824 592 aaKnown RBP24.64■■□□□ 1.54
RFTN1-201ENST00000334133 A0A1W2PP64 1363 aa24.64■■□□□ 1.53
RFTN1-201ENST00000334133 CFAP53Q96M91 514 aa24.64■■□□□ 1.53
RFTN1-201ENST00000334133 ZBTB47Q9UFB7 747 aaPredicted RBP24.64■■□□□ 1.53
RFTN1-201ENST00000334133 KDM2BQ8NHM5 1336 aa24.63■■□□□ 1.53
RFTN1-201ENST00000334133 PANK1Q8TE04 598 aa24.63■■□□□ 1.53
RFTN1-201ENST00000334133 U2SURPO15042 1029 aaKnown RBP24.63■■□□□ 1.53
RFTN1-201ENST00000334133 RGS3P49796 1198 aa24.63■■□□□ 1.53
RFTN1-201ENST00000334133 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
RFTN1-201ENST00000334133 COG6Q9Y2V7 657 aa24.6■■□□□ 1.53
RFTN1-201ENST00000334133 FBLN1P23142 703 aa24.6■■□□□ 1.53
RFTN1-201ENST00000334133 WAPLQ7Z5K2 1190 aa24.6■■□□□ 1.53
RFTN1-201ENST00000334133 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
RFTN1-201ENST00000334133 TNNQ9UQP3 1299 aa24.6■■□□□ 1.53
RFTN1-201ENST00000334133 MS4A1P11836 297 aa24.59■■□□□ 1.53
RFTN1-201ENST00000334133 CENPQQ7L2Z9 268 aaPredicted RBP24.58■■□□□ 1.53
RFTN1-201ENST00000334133 TMEM131LA2VDJ0 1609 aa24.57■■□□□ 1.52
RFTN1-201ENST00000334133 CDK19Q9BWU1 502 aa24.57■■□□□ 1.52
RFTN1-201ENST00000334133 CABP1Q9NZU7 370 aa24.57■■□□□ 1.52
RFTN1-201ENST00000334133 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
RFTN1-201ENST00000334133 FYB1O15117 783 aa24.55■■□□□ 1.52
RFTN1-201ENST00000334133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.55■■□□□ 1.52
RFTN1-201ENST00000334133 CLUAP1Q96AJ1 413 aa24.54■■□□□ 1.52
RFTN1-201ENST00000334133 PTPRMP28827 1452 aa24.54■■□□□ 1.52
RFTN1-201ENST00000334133 PPM1GO15355 546 aaPredicted RBP24.54■■□□□ 1.52
RFTN1-201ENST00000334133 IGHDP01880 384 aa24.54■■□□□ 1.52
RFTN1-201ENST00000334133 ZFYVE9O95405 1425 aa24.52■■□□□ 1.52
RFTN1-201ENST00000334133 TSR2Q969E8 191 aaKnown RBP24.52■■□□□ 1.52
RFTN1-201ENST00000334133 TERF2IPQ9NYB0 399 aa24.52■■□□□ 1.52
RFTN1-201ENST00000334133 PUS7Q96PZ0 661 aaKnown RBP24.51■■□□□ 1.51
RFTN1-201ENST00000334133 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
RFTN1-201ENST00000334133 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
RFTN1-201ENST00000334133 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
RFTN1-201ENST00000334133 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
RFTN1-201ENST00000334133 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
RFTN1-201ENST00000334133 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
RFTN1-201ENST00000334133 RLBP1P12271 317 aa24.48■■□□□ 1.51
RFTN1-201ENST00000334133 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
RFTN1-201ENST00000334133 DIP2BQ9P265 1576 aa24.48■■□□□ 1.51
RFTN1-201ENST00000334133 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
RFTN1-201ENST00000334133 ALKQ9UM73 1620 aa24.47■■□□□ 1.51
RFTN1-201ENST00000334133 LAS1LQ9Y4W2 734 aaKnown RBP24.47■■□□□ 1.51
RFTN1-201ENST00000334133 USP32Q8NFA0 1604 aa24.47■■□□□ 1.51
RFTN1-201ENST00000334133 NSD2O96028 1365 aa24.46■■□□□ 1.51
RFTN1-201ENST00000334133 HDGFL2Q7Z4V5 671 aaPredicted RBP24.46■■□□□ 1.51
RFTN1-201ENST00000334133 ATAD2Q6PL18 1390 aa24.46■■□□□ 1.51
RFTN1-201ENST00000334133 WDR63Q8IWG1 891 aa24.46■■□□□ 1.51
RFTN1-201ENST00000334133 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
RFTN1-201ENST00000334133 SLC4A3P48751 1232 aa24.45■■□□□ 1.5
RFTN1-201ENST00000334133 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
RFTN1-201ENST00000334133 PDE3AQ14432 1141 aa24.44■■□□□ 1.5
RFTN1-201ENST00000334133 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
RFTN1-201ENST00000334133 TXNDC2Q86VQ3 553 aa24.42■■□□□ 1.5
RFTN1-201ENST00000334133 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
RFTN1-201ENST00000334133 TMPOP42166 694 aaKnown RBP24.41■■□□□ 1.5
RFTN1-201ENST00000334133 C8orf34Q49A92 452 aa24.41■■□□□ 1.5
RFTN1-201ENST00000334133 ESF1Q9H501 851 aaKnown RBP24.41■■□□□ 1.5
RFTN1-201ENST00000334133 PLEKHF1Q96S99 279 aa24.41■■□□□ 1.5
RFTN1-201ENST00000334133 RIMS2Q9UQ26 1411 aa24.4■■□□□ 1.5
RFTN1-201ENST00000334133 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
RFTN1-201ENST00000334133 MYH16Q9H6N6 1097 aa24.4■■□□□ 1.5
RFTN1-201ENST00000334133 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
RFTN1-201ENST00000334133 A2ML1A8K2U0 1454 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms