RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
LINC01006-201ENST00000333319 TULP4Q9NRJ4 1543 aa26.78■■□□□ 1.88
LINC01006-201ENST00000333319 CGNL1Q0VF96 1302 aa26.78■■□□□ 1.88
LINC01006-201ENST00000333319 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
LINC01006-201ENST00000333319 SAFB2Q14151 953 aaKnown RBP eCLIP26.77■■□□□ 1.88
LINC01006-201ENST00000333319 NOP58Q9Y2X3 529 aaKnown RBP26.77■■□□□ 1.88
LINC01006-201ENST00000333319 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
LINC01006-201ENST00000333319 ZFYVE9O95405 1425 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 CABP2Q9NPB3 220 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 MS4A1P11836 297 aa26.76■■□□□ 1.87
LINC01006-201ENST00000333319 MYO5BQ9ULV0 1848 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 STK26Q9P289 416 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 SHPRHQ149N8 1683 aa26.75■■□□□ 1.87
LINC01006-201ENST00000333319 PDE4AP27815 886 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 ANKRD36BQ8N2N9 1353 aa26.74■■□□□ 1.87
LINC01006-201ENST00000333319 IPO9Q96P70 1041 aaKnown RBP26.73■■□□□ 1.87
LINC01006-201ENST00000333319 MTHFSP49914 203 aa26.72■■□□□ 1.87
LINC01006-201ENST00000333319 WWC1Q8IX03 1113 aa26.72■■□□□ 1.87
LINC01006-201ENST00000333319 TMEM131LA2VDJ0 1609 aa26.71■■□□□ 1.87
LINC01006-201ENST00000333319 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.87
LINC01006-201ENST00000333319 SKAP1Q86WV1 359 aa26.7■■□□□ 1.87
LINC01006-201ENST00000333319 BCAR3O75815 825 aa26.7■■□□□ 1.86
LINC01006-201ENST00000333319 PAK3O75914 559 aaPredicted RBP26.7■■□□□ 1.86
LINC01006-201ENST00000333319 FBXO31Q5XUX0 539 aaPredicted RBP26.7■■□□□ 1.86
LINC01006-201ENST00000333319 BACH2Q9BYV9 841 aa26.7■■□□□ 1.86
LINC01006-201ENST00000333319 KDM2BQ8NHM5 1336 aa26.69■■□□□ 1.86
LINC01006-201ENST00000333319 RUNDC1Q96C34 613 aa26.69■■□□□ 1.86
LINC01006-201ENST00000333319 NEUROD2Q15784 382 aa26.68■■□□□ 1.86
LINC01006-201ENST00000333319 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
LINC01006-201ENST00000333319 SRPK2P78362 688 aaKnown RBP26.67■■□□□ 1.86
LINC01006-201ENST00000333319 NSD2O96028 1365 aa26.66■■□□□ 1.86
LINC01006-201ENST00000333319 CENPQQ7L2Z9 268 aaPredicted RBP26.66■■□□□ 1.86
LINC01006-201ENST00000333319 RRP7AQ9Y3A4 280 aaKnown RBP26.66■■□□□ 1.86
LINC01006-201ENST00000333319 TCP11L2Q8N4U5 519 aa26.65■■□□□ 1.86
LINC01006-201ENST00000333319 NPM2Q86SE8 214 aaKnown RBP26.64■■□□□ 1.86
LINC01006-201ENST00000333319 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 ZBTB47Q9UFB7 747 aaPredicted RBP26.62■■□□□ 1.85
LINC01006-201ENST00000333319 PTPRMP28827 1452 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 MINK1Q8N4C8 1332 aaPredicted RBP26.62■■□□□ 1.85
LINC01006-201ENST00000333319 A0A1W2PP64 1363 aa26.62■■□□□ 1.85
LINC01006-201ENST00000333319 IQSEC2Q5JU85 1478 aa26.61■■□□□ 1.85
LINC01006-201ENST00000333319 POGKQ9P215 609 aa26.61■■□□□ 1.85
LINC01006-201ENST00000333319 YTHDC2Q9H6S0 1430 aaKnown RBP26.61■■□□□ 1.85
LINC01006-201ENST00000333319 STAG3Q9UJ98 1225 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 NINLQ9Y2I6 1382 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 TSPOAP1O95153 1857 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 DIP2BQ9P265 1576 aa26.6■■□□□ 1.85
LINC01006-201ENST00000333319 ABCC11Q96J66 1382 aa26.59■■□□□ 1.85
LINC01006-201ENST00000333319 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
LINC01006-201ENST00000333319 RIMBP3CA6NJZ7 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 RIMBP3BA6NNM3 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 RIMBP3Q9UFD9 1639 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 ATAD2Q6PL18 1390 aa26.57■■□□□ 1.84
LINC01006-201ENST00000333319 U2AF1L5P0DN76 240 aaPredicted RBP26.56■■□□□ 1.84
LINC01006-201ENST00000333319 U2AF1Q01081 240 aaKnown RBP eCLIP26.56■■□□□ 1.84
LINC01006-201ENST00000333319 GGNBP2Q9H3C7 697 aa26.56■■□□□ 1.84
LINC01006-201ENST00000333319 WDR63Q8IWG1 891 aa26.55■■□□□ 1.84
LINC01006-201ENST00000333319 ALKQ9UM73 1620 aa26.55■■□□□ 1.84
LINC01006-201ENST00000333319 TERF2IPQ9NYB0 399 aa26.54■■□□□ 1.84
LINC01006-201ENST00000333319 PDE3AQ14432 1141 aa26.54■■□□□ 1.84
LINC01006-201ENST00000333319 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
LINC01006-201ENST00000333319 CCDC27Q2M243 656 aa26.53■■□□□ 1.84
LINC01006-201ENST00000333319 PPP6R1Q9UPN7 881 aa26.51■■□□□ 1.84
LINC01006-201ENST00000333319 CLTCQ00610 1675 aaKnown RBP26.5■■□□□ 1.83
LINC01006-201ENST00000333319 FYB1O15117 783 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 CDK19Q9BWU1 502 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 AGLP35573 1532 aa26.5■■□□□ 1.83
LINC01006-201ENST00000333319 CD163L1Q9NR16 1453 aa26.49■■□□□ 1.83
LINC01006-201ENST00000333319 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
LINC01006-201ENST00000333319 PANK1Q8TE04 598 aa26.49■■□□□ 1.83
LINC01006-201ENST00000333319 FRAT1Q92837 279 aaPredicted RBP26.49■■□□□ 1.83
LINC01006-201ENST00000333319 MLECQ14165 292 aa26.48■■□□□ 1.83
LINC01006-201ENST00000333319 NCBP3Q53F19 620 aaKnown RBP26.47■■□□□ 1.83
LINC01006-201ENST00000333319 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
LINC01006-201ENST00000333319 U2SURPO15042 1029 aaKnown RBP26.46■■□□□ 1.83
LINC01006-201ENST00000333319 NBR1Q14596 966 aa26.46■■□□□ 1.83
LINC01006-201ENST00000333319 HDGFL2Q7Z4V5 671 aaPredicted RBP26.46■■□□□ 1.83
LINC01006-201ENST00000333319 CABP1Q9NZU7 370 aa26.45■■□□□ 1.83
LINC01006-201ENST00000333319 A2ML1A8K2U0 1454 aa26.45■■□□□ 1.82
LINC01006-201ENST00000333319 ARHGEF40Q8TER5 1519 aa26.45■■□□□ 1.82
LINC01006-201ENST00000333319 ADGRB2O60241 1585 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 RGS3P49796 1198 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 MYH16Q9H6N6 1097 aa26.44■■□□□ 1.82
LINC01006-201ENST00000333319 ANKRD26Q9UPS8 1709 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 MED14O60244 1454 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 NLRP1Q9C000 1473 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 IGHDP01880 384 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 CLUAP1Q96AJ1 413 aa26.43■■□□□ 1.82
LINC01006-201ENST00000333319 WAPLQ7Z5K2 1190 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 SPATA31D1Q6ZQQ2 1576 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 COL3A1P02461 1466 aaPredicted RBP26.42■■□□□ 1.82
LINC01006-201ENST00000333319 RIMS2Q9UQ26 1411 aa26.42■■□□□ 1.82
LINC01006-201ENST00000333319 PLEKHF1Q96S99 279 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 FAM161AQ3B820 660 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 BCL2L13Q9BXK5 485 aa26.41■■□□□ 1.82
LINC01006-201ENST00000333319 C8orf34Q49A92 452 aa26.39■■□□□ 1.81
LINC01006-201ENST00000333319 TMPOP42166 694 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms