RNA–Protein interactions for RNA: ENST00000332506.7

C3orf35-202, Transcript of chromosome 3 open reading frame 35, humanhuman

TSL 1 (best)

Gene C3orf35, Length 1,845 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-202ENST00000332506 ANP32CO43423 234 aa16.32■□□□□ 0.2
C3orf35-202ENST00000332506 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
C3orf35-202ENST00000332506 CPS1P31327 1500 aa16.32■□□□□ 0.2
C3orf35-202ENST00000332506 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
C3orf35-202ENST00000332506 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
C3orf35-202ENST00000332506 NPHP4O75161 1426 aaPredicted RBP16.31■□□□□ 0.2
C3orf35-202ENST00000332506 MYOM1P52179 1685 aa16.3■□□□□ 0.2
C3orf35-202ENST00000332506 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
C3orf35-202ENST00000332506 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
C3orf35-202ENST00000332506 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
C3orf35-202ENST00000332506 HSPA2P54652 639 aa16.29■□□□□ 0.2
C3orf35-202ENST00000332506 SIRT1Q96EB6 747 aa16.29■□□□□ 0.2
C3orf35-202ENST00000332506 PANK3Q9H999 370 aa16.29■□□□□ 0.2
C3orf35-202ENST00000332506 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
C3orf35-202ENST00000332506 LMTK3Q96Q04 1460 aa16.27■□□□□ 0.19
C3orf35-202ENST00000332506 PIK3R4Q99570 1358 aa16.27■□□□□ 0.19
C3orf35-202ENST00000332506 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
C3orf35-202ENST00000332506 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
C3orf35-202ENST00000332506 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
C3orf35-202ENST00000332506 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
C3orf35-202ENST00000332506 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
C3orf35-202ENST00000332506 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
C3orf35-202ENST00000332506 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
C3orf35-202ENST00000332506 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
C3orf35-202ENST00000332506 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
C3orf35-202ENST00000332506 KCNA6P17658 529 aa16.24■□□□□ 0.19
C3orf35-202ENST00000332506 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
C3orf35-202ENST00000332506 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
C3orf35-202ENST00000332506 TSHZ2Q9NRE2 1034 aa16.23■□□□□ 0.19
C3orf35-202ENST00000332506 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
C3orf35-202ENST00000332506 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
C3orf35-202ENST00000332506 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.19
C3orf35-202ENST00000332506 ATAD2Q6PL18 1390 aa16.2■□□□□ 0.18
C3orf35-202ENST00000332506 ADGRB2O60241 1585 aa16.19■□□□□ 0.18
C3orf35-202ENST00000332506 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
C3orf35-202ENST00000332506 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
C3orf35-202ENST00000332506 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
C3orf35-202ENST00000332506 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
C3orf35-202ENST00000332506 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
C3orf35-202ENST00000332506 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
C3orf35-202ENST00000332506 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
C3orf35-202ENST00000332506 NINLQ9Y2I6 1382 aa16.16■□□□□ 0.18
C3orf35-202ENST00000332506 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
C3orf35-202ENST00000332506 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
C3orf35-202ENST00000332506 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
C3orf35-202ENST00000332506 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
C3orf35-202ENST00000332506 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
C3orf35-202ENST00000332506 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
C3orf35-202ENST00000332506 NUTM2FA1L443 756 aa16.13■□□□□ 0.17
C3orf35-202ENST00000332506 RALBP1Q15311 655 aa16.13■□□□□ 0.17
C3orf35-202ENST00000332506 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
C3orf35-202ENST00000332506 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
C3orf35-202ENST00000332506 NALCNQ8IZF0 1738 aa16.13■□□□□ 0.17
C3orf35-202ENST00000332506 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 ATP7BP35670 1465 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 PARD3Q8TEW0 1356 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
C3orf35-202ENST00000332506 STRCP1A6NGW2 1772 aa16.11■□□□□ 0.17
C3orf35-202ENST00000332506 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
C3orf35-202ENST00000332506 CCDC61Q9Y6R9 512 aa16.11■□□□□ 0.17
C3orf35-202ENST00000332506 USP32Q8NFA0 1604 aa16.09■□□□□ 0.17
C3orf35-202ENST00000332506 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
C3orf35-202ENST00000332506 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
C3orf35-202ENST00000332506 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
C3orf35-202ENST00000332506 RGPD8O14715 1765 aaPredicted RBP16.09■□□□□ 0.17
C3orf35-202ENST00000332506 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
C3orf35-202ENST00000332506 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
C3orf35-202ENST00000332506 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
C3orf35-202ENST00000332506 C14orf37Q86TY3 774 aa16.08■□□□□ 0.17
C3orf35-202ENST00000332506 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
C3orf35-202ENST00000332506 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
C3orf35-202ENST00000332506 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
C3orf35-202ENST00000332506 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
C3orf35-202ENST00000332506 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
C3orf35-202ENST00000332506 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
C3orf35-202ENST00000332506 CPSF1Q10570 1443 aaKnown RBP16.05■□□□□ 0.16
C3orf35-202ENST00000332506 AKAP12Q02952 1782 aa16.05■□□□□ 0.16
C3orf35-202ENST00000332506 MON2Q7Z3U7 1717 aa16.03■□□□□ 0.16
C3orf35-202ENST00000332506 ANKARQ7Z5J8 1434 aa16.03■□□□□ 0.16
C3orf35-202ENST00000332506 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
C3orf35-202ENST00000332506 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
C3orf35-202ENST00000332506 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
C3orf35-202ENST00000332506 ACEP12821 1306 aa16.02■□□□□ 0.16
C3orf35-202ENST00000332506 PMFBP1Q8TBY8 1022 aa16.02■□□□□ 0.16
C3orf35-202ENST00000332506 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
C3orf35-202ENST00000332506 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
C3orf35-202ENST00000332506 PPP2R1AP30153 589 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■□□ 19.1
C3orf35-202ENST00000332506 NSD2O96028 1365 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
C3orf35-202ENST00000332506 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
C3orf35-202ENST00000332506 EDC4Q6P2E9 1401 aaKnown RBP16■□□□□ 0.15
C3orf35-202ENST00000332506 FYB1O15117 783 aa16■□□□□ 0.15
C3orf35-202ENST00000332506 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
C3orf35-202ENST00000332506 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms