RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.81
NSMCE3-201ENST00000332303 GNAI3P08754 354 aa20.11■□□□□ 0.81
NSMCE3-201ENST00000332303 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
NSMCE3-201ENST00000332303 CDC45O75419 566 aa20.11■□□□□ 0.81
NSMCE3-201ENST00000332303 ERICH2A1L162 156 aa20.11■□□□□ 0.81
NSMCE3-201ENST00000332303 CCAR2Q8N163 923 aaKnown RBP20.11■□□□□ 0.81
NSMCE3-201ENST00000332303 RALYLQ86SE5 291 aaKnown RBP20.1■□□□□ 0.81
NSMCE3-201ENST00000332303 NFXL1Q6ZNB6 911 aa20.1■□□□□ 0.81
NSMCE3-201ENST00000332303 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
NSMCE3-201ENST00000332303 DHX16O60231 1041 aaKnown RBP20.1■□□□□ 0.81
NSMCE3-201ENST00000332303 GAS2L2Q8NHY3 880 aa20.1■□□□□ 0.81
NSMCE3-201ENST00000332303 NEUROD6Q96NK8 337 aa20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 SAFBQ15424 915 aaKnown RBP eCLIP20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 HFM1A2PYH4 1435 aa20.09■□□□□ 0.81
NSMCE3-201ENST00000332303 RAD21O60216 631 aa20.08■□□□□ 0.81
NSMCE3-201ENST00000332303 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
NSMCE3-201ENST00000332303 CCDC73Q6ZRK6 1079 aa20.08■□□□□ 0.8
NSMCE3-201ENST00000332303 CCDC70Q6NSX1 233 aa20.08■□□□□ 0.8
NSMCE3-201ENST00000332303 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
NSMCE3-201ENST00000332303 TCEAL9Q9UHQ7 104 aa20.06■□□□□ 0.8
NSMCE3-201ENST00000332303 CCDC30Q5VVM6 783 aa20.06■□□□□ 0.8
NSMCE3-201ENST00000332303 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
NSMCE3-201ENST00000332303 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
NSMCE3-201ENST00000332303 CTDP1Q9Y5B0 961 aaPredicted RBP20.05■□□□□ 0.8
NSMCE3-201ENST00000332303 GPS2Q13227 327 aa20.05■□□□□ 0.8
NSMCE3-201ENST00000332303 WASHC4Q2M389 1173 aa20.05■□□□□ 0.8
NSMCE3-201ENST00000332303 SASS6Q6UVJ0 657 aa20.05■□□□□ 0.8
NSMCE3-201ENST00000332303 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
NSMCE3-201ENST00000332303 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
NSMCE3-201ENST00000332303 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
NSMCE3-201ENST00000332303 SURF6O75683 361 aaKnown RBP20.04■□□□□ 0.8
NSMCE3-201ENST00000332303 PDE3AQ14432 1141 aa20.04■□□□□ 0.8
NSMCE3-201ENST00000332303 PCMTD1Q96MG8 357 aaPredicted RBP20.04■□□□□ 0.8
NSMCE3-201ENST00000332303 PRM3Q9NNZ6 103 aa20.03■□□□□ 0.8
NSMCE3-201ENST00000332303 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
NSMCE3-201ENST00000332303 EXOSC9Q06265 439 aaKnown RBP20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 PSMA5P28066 241 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 CNTROBQ8N137 903 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 ZNF592Q92610 1267 aa20.02■□□□□ 0.8
NSMCE3-201ENST00000332303 RBM33Q96EV2 1170 aaKnown RBP20.02■□□□□ 0.79
NSMCE3-201ENST00000332303 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.79
NSMCE3-201ENST00000332303 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
NSMCE3-201ENST00000332303 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
NSMCE3-201ENST00000332303 SCAPERQ9BY12 1400 aa20.01■□□□□ 0.79
NSMCE3-201ENST00000332303 HOMER1Q86YM7 354 aa20.01■□□□□ 0.79
NSMCE3-201ENST00000332303 TWISTNBQ3B726 338 aaPredicted RBP20■□□□□ 0.79
NSMCE3-201ENST00000332303 ZSCAN21Q9Y5A6 473 aaPredicted RBP20■□□□□ 0.79
NSMCE3-201ENST00000332303 FSD1Q9BTV5 496 aa20■□□□□ 0.79
NSMCE3-201ENST00000332303 WWC1Q8IX03 1113 aa20■□□□□ 0.79
NSMCE3-201ENST00000332303 PRAM1Q96QH2 718 aa20■□□□□ 0.79
NSMCE3-201ENST00000332303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.99■□□□□ 0.79
NSMCE3-201ENST00000332303 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
NSMCE3-201ENST00000332303 PRDM2Q13029 1718 aa19.98■□□□□ 0.79
NSMCE3-201ENST00000332303 SLC52A1Q9NWF4 448 aa19.98■□□□□ 0.79
NSMCE3-201ENST00000332303 ARAP1Q96P48 1450 aa19.98■□□□□ 0.79
NSMCE3-201ENST00000332303 CFTRP13569 1480 aa19.98■□□□□ 0.79
NSMCE3-201ENST00000332303 NFKBIBQ15653 356 aa19.97■□□□□ 0.79
NSMCE3-201ENST00000332303 MCM2P49736 904 aa19.97■□□□□ 0.79
NSMCE3-201ENST00000332303 GCC1Q96CN9 775 aa19.97■□□□□ 0.79
NSMCE3-201ENST00000332303 ZNF692Q9BU19 519 aaPredicted RBP19.97■□□□□ 0.79
NSMCE3-201ENST00000332303 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
NSMCE3-201ENST00000332303 SDF4Q9BRK5 362 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 KIAA1107Q9UPP5 1409 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 FBXW7Q969H0 707 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 PDZRN3Q9UPQ7 1066 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 XBP1P17861 261 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 PDCP20941 246 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 TBC1D2BQ9UPU7 963 aa19.96■□□□□ 0.79
NSMCE3-201ENST00000332303 HIP1O00291 1037 aa19.95■□□□□ 0.78
NSMCE3-201ENST00000332303 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
NSMCE3-201ENST00000332303 NEK4P51957 841 aa19.95■□□□□ 0.78
NSMCE3-201ENST00000332303 CCDC43Q96MW1 224 aaKnown RBP19.95■□□□□ 0.78
NSMCE3-201ENST00000332303 GNAI2P04899 355 aa19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 BRMS1Q9HCU9 246 aa19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 MEX3CQ5U5Q3 659 aaKnown RBP19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 SART3Q15020 963 aaKnown RBP19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 ERC1Q8IUD2 1116 aa19.94■□□□□ 0.78
NSMCE3-201ENST00000332303 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 NBPF8Q3BBV2 869 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 MBD3O95983 291 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 FOSBP53539 338 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 RABEP1Q15276 862 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 HDGFL1Q5TGJ6 251 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 C9orf84Q5VXU9 1444 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 MRE11P49959 708 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
NSMCE3-201ENST00000332303 FAM43AQ8N2R8 423 aa19.92■□□□□ 0.78
NSMCE3-201ENST00000332303 SULT6B1Q6IMI4 303 aa19.92■□□□□ 0.78
NSMCE3-201ENST00000332303 NAT10Q9H0A0 1025 aaKnown RBP19.92■□□□□ 0.78
NSMCE3-201ENST00000332303 THEMISQ8N1K5 641 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms