RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
PRAMEF1-201ENST00000332296 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
PRAMEF1-201ENST00000332296 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
PRAMEF1-201ENST00000332296 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
PRAMEF1-201ENST00000332296 SLC52A1Q9NWF4 448 aa13.4□□□□□ -0.26
PRAMEF1-201ENST00000332296 IQGAP1P46940 1657 aa13.4□□□□□ -0.26
PRAMEF1-201ENST00000332296 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
PRAMEF1-201ENST00000332296 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
PRAMEF1-201ENST00000332296 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
PRAMEF1-201ENST00000332296 RGL2O15211 777 aa13.39□□□□□ -0.27
PRAMEF1-201ENST00000332296 PANK3Q9H999 370 aa13.39□□□□□ -0.27
PRAMEF1-201ENST00000332296 NOP58Q9Y2X3 529 aaKnown RBP13.38□□□□□ -0.27
PRAMEF1-201ENST00000332296 TNRQ92752 1358 aa13.38□□□□□ -0.27
PRAMEF1-201ENST00000332296 ADGRB3O60242 1522 aa13.38□□□□□ -0.27
PRAMEF1-201ENST00000332296 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
PRAMEF1-201ENST00000332296 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
PRAMEF1-201ENST00000332296 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
PRAMEF1-201ENST00000332296 TMF1P82094 1093 aa13.35□□□□□ -0.27
PRAMEF1-201ENST00000332296 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
PRAMEF1-201ENST00000332296 MYOM1P52179 1685 aa13.34□□□□□ -0.27
PRAMEF1-201ENST00000332296 IFT172Q9UG01 1749 aa13.34□□□□□ -0.27
PRAMEF1-201ENST00000332296 PPLO60437 1756 aa13.34□□□□□ -0.27
PRAMEF1-201ENST00000332296 PLIN1O60240 522 aa13.32□□□□□ -0.28
PRAMEF1-201ENST00000332296 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
PRAMEF1-201ENST00000332296 INSRP06213 1382 aa13.32□□□□□ -0.28
PRAMEF1-201ENST00000332296 PTPRMP28827 1452 aa13.32□□□□□ -0.28
PRAMEF1-201ENST00000332296 SETD1BQ9UPS6 1966 aaKnown RBP13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 IPO9Q96P70 1041 aaKnown RBP13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 A2ML1A8K2U0 1454 aa13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 UBR1Q8IWV7 1749 aa13.31□□□□□ -0.28
PRAMEF1-201ENST00000332296 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
PRAMEF1-201ENST00000332296 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
PRAMEF1-201ENST00000332296 RPGRIP1LQ68CZ1 1315 aa13.3□□□□□ -0.28
PRAMEF1-201ENST00000332296 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
PRAMEF1-201ENST00000332296 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
PRAMEF1-201ENST00000332296 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
PRAMEF1-201ENST00000332296 ADAMTS8Q9UP79 889 aa13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 MYOM2P54296 1465 aa13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
PRAMEF1-201ENST00000332296 PPP2R1AP30153 589 aa13.27□□□□□ -0.28
PRAMEF1-201ENST00000332296 SKAP1Q86WV1 359 aa13.27□□□□□ -0.28
PRAMEF1-201ENST00000332296 CRBNQ96SW2 442 aa13.27□□□□□ -0.28
PRAMEF1-201ENST00000332296 TCERG1O14776 1098 aaKnown RBP13.26□□□□□ -0.29
PRAMEF1-201ENST00000332296 VGFO15240 615 aaPredicted RBP13.26□□□□□ -0.29
PRAMEF1-201ENST00000332296 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
PRAMEF1-201ENST00000332296 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 RIMS2Q9UQ26 1411 aa13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 KIAA1210Q9ULL0 1709 aa13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
PRAMEF1-201ENST00000332296 PDE4AP27815 886 aa13.24□□□□□ -0.29
PRAMEF1-201ENST00000332296 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
PRAMEF1-201ENST00000332296 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
PRAMEF1-201ENST00000332296 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
PRAMEF1-201ENST00000332296 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
PRAMEF1-201ENST00000332296 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
PRAMEF1-201ENST00000332296 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
PRAMEF1-201ENST00000332296 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
PRAMEF1-201ENST00000332296 ZFYVE9O95405 1425 aa13.23□□□□□ -0.29
PRAMEF1-201ENST00000332296 BACH2Q9BYV9 841 aa13.22□□□□□ -0.29
PRAMEF1-201ENST00000332296 WDR43Q15061 677 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRAMEF1-201ENST00000332296 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
PRAMEF1-201ENST00000332296 ZNF521Q96K83 1311 aa13.22□□□□□ -0.29
PRAMEF1-201ENST00000332296 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
PRAMEF1-201ENST00000332296 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.3
PRAMEF1-201ENST00000332296 SPOCK2Q92563 424 aa13.21□□□□□ -0.3
PRAMEF1-201ENST00000332296 MS4A1P11836 297 aa13.2□□□□□ -0.3
PRAMEF1-201ENST00000332296 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
PRAMEF1-201ENST00000332296 LTKP29376 864 aa13.2□□□□□ -0.3
PRAMEF1-201ENST00000332296 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
PRAMEF1-201ENST00000332296 C14orf93Q9H972 538 aaKnown RBP13.2□□□□□ -0.3
PRAMEF1-201ENST00000332296 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
PRAMEF1-201ENST00000332296 SLIT1O75093 1534 aa13.19□□□□□ -0.3
PRAMEF1-201ENST00000332296 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
PRAMEF1-201ENST00000332296 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 EID1Q9Y6B2 187 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 TMEM132EQ6IEE7 984 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 CCDC146Q8IYE0 955 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 KDM2BQ8NHM5 1336 aa13.18□□□□□ -0.3
PRAMEF1-201ENST00000332296 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
PRAMEF1-201ENST00000332296 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
PRAMEF1-201ENST00000332296 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
PRAMEF1-201ENST00000332296 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
PRAMEF1-201ENST00000332296 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
PRAMEF1-201ENST00000332296 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
PRAMEF1-201ENST00000332296 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
PRAMEF1-201ENST00000332296 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
PRAMEF1-201ENST00000332296 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
PRAMEF1-201ENST00000332296 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
PRAMEF1-201ENST00000332296 PLEKHG1Q9ULL1 1385 aa13.14□□□□□ -0.31
PRAMEF1-201ENST00000332296 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms