RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 PRAM1Q96QH2 718 aa29.96■■■□□ 2.39
YBX1-202ENST00000332220 CDC42BPGQ6DT37 1551 aa29.95■■■□□ 2.39
YBX1-202ENST00000332220 GPRASP1Q5JY77 1395 aa29.93■■■□□ 2.38
YBX1-202ENST00000332220 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
YBX1-202ENST00000332220 QRICH2Q9H0J4 1663 aa29.92■■■□□ 2.38
YBX1-202ENST00000332220 ROBO1Q9Y6N7 1651 aa29.92■■■□□ 2.38
YBX1-202ENST00000332220 PIP4K2BP78356 416 aa29.92■■■□□ 2.38
YBX1-202ENST00000332220 SAFB2Q14151 953 aaKnown RBP eCLIP29.92■■■□□ 2.38
YBX1-202ENST00000332220 RGPD8O14715 1765 aaPredicted RBP29.92■■■□□ 2.38
YBX1-202ENST00000332220 ATF3P18847 181 aa29.91■■■□□ 2.38
YBX1-202ENST00000332220 ILDR1Q86SU0 546 aaPredicted RBP29.91■■■□□ 2.38
YBX1-202ENST00000332220 POGKQ9P215 609 aa29.91■■■□□ 2.38
YBX1-202ENST00000332220 ADGRB2O60241 1585 aa29.9■■■□□ 2.38
YBX1-202ENST00000332220 CADPS2Q86UW7 1296 aa29.9■■■□□ 2.38
YBX1-202ENST00000332220 SCAF1Q9H7N4 1312 aaKnown RBP29.89■■■□□ 2.38
YBX1-202ENST00000332220 MST1RQ04912 1400 aa29.88■■■□□ 2.37
YBX1-202ENST00000332220 SLAIN2Q9P270 581 aa29.86■■■□□ 2.37
YBX1-202ENST00000332220 MINK1Q8N4C8 1332 aaPredicted RBP29.83■■■□□ 2.37
YBX1-202ENST00000332220 CARD11Q9BXL7 1154 aa29.82■■■□□ 2.36
YBX1-202ENST00000332220 USP32Q8NFA0 1604 aa29.8■■■□□ 2.36
YBX1-202ENST00000332220 C1orf167Q5SNV9 1468 aa29.8■■■□□ 2.36
YBX1-202ENST00000332220 CENPJQ9HC77 1338 aaPredicted RBP29.79■■■□□ 2.36
YBX1-202ENST00000332220 HIRIP3Q9BW71 556 aaPredicted RBP29.79■■■□□ 2.36
YBX1-202ENST00000332220 PHLPP1O60346 1717 aa29.76■■■□□ 2.35
YBX1-202ENST00000332220 NHSL1Q5SYE7 1610 aa29.75■■■□□ 2.35
YBX1-202ENST00000332220 EIF3AQ14152 1382 aaKnown RBP29.75■■■□□ 2.35
YBX1-202ENST00000332220 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
YBX1-202ENST00000332220 BRINP3Q76B58 766 aa29.72■■■□□ 2.35
YBX1-202ENST00000332220 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
YBX1-202ENST00000332220 TULP4Q9NRJ4 1543 aa29.71■■■□□ 2.35
YBX1-202ENST00000332220 AHDC1Q5TGY3 1603 aaPredicted RBP29.7■■■□□ 2.34
YBX1-202ENST00000332220 WASLO00401 505 aaPredicted RBP29.69■■■□□ 2.34
YBX1-202ENST00000332220 HSPA1LP34931 641 aa29.69■■■□□ 2.34
YBX1-202ENST00000332220 ORAI2Q96SN7 254 aa29.69■■■□□ 2.34
YBX1-202ENST00000332220 KIF1AQ12756 1690 aa29.69■■■□□ 2.34
YBX1-202ENST00000332220 TOPAZ1Q8N9V7 1692 aa29.67■■■□□ 2.34
YBX1-202ENST00000332220 COL16A1Q07092 1604 aaPredicted RBP29.67■■■□□ 2.34
YBX1-202ENST00000332220 ANKARQ7Z5J8 1434 aa29.66■■■□□ 2.34
YBX1-202ENST00000332220 PRR36Q9H6K5 1346 aa29.65■■■□□ 2.34
YBX1-202ENST00000332220 USP47Q96K76 1375 aa29.64■■■□□ 2.34
YBX1-202ENST00000332220 ATP7BP35670 1465 aa29.64■■■□□ 2.34
YBX1-202ENST00000332220 ESCO1Q5FWF5 840 aa29.63■■■□□ 2.33
YBX1-202ENST00000332220 CDK19Q9BWU1 502 aa29.63■■■□□ 2.33
YBX1-202ENST00000332220 SBNO2Q9Y2G9 1366 aa29.63■■■□□ 2.33
YBX1-202ENST00000332220 DDX17Q92841 729 aaKnown RBP29.6■■■□□ 2.33
YBX1-202ENST00000332220 ST20-MTHFSA0A0A6YYL1 179 aa29.59■■■□□ 2.33
YBX1-202ENST00000332220 NUDT16Q96DE0 195 aaKnown RBP29.56■■■□□ 2.32
YBX1-202ENST00000332220 EVC2Q86UK5 1308 aa29.55■■■□□ 2.32
YBX1-202ENST00000332220 TESK2Q96S53 571 aa29.55■■■□□ 2.32
YBX1-202ENST00000332220 CABP2Q9NPB3 220 aa29.55■■■□□ 2.32
YBX1-202ENST00000332220 SRPK2P78362 688 aaKnown RBP29.54■■■□□ 2.32
YBX1-202ENST00000332220 PHF8Q9UPP1 1060 aa29.54■■■□□ 2.32
YBX1-202ENST00000332220 PXDNQ92626 1479 aa29.52■■■□□ 2.32
YBX1-202ENST00000332220 SHPRHQ149N8 1683 aa29.51■■■□□ 2.31
YBX1-202ENST00000332220 FOXO3O43524 673 aa29.51■■■□□ 2.31
YBX1-202ENST00000332220 PMFBP1Q8TBY8 1022 aa29.51■■■□□ 2.31
YBX1-202ENST00000332220 TRPM3Q9HCF6 1732 aaPredicted RBP29.48■■■□□ 2.31
YBX1-202ENST00000332220 NPHP3Q7Z494 1330 aa29.48■■■□□ 2.31
YBX1-202ENST00000332220 SOS2Q07890 1332 aaPredicted RBP29.47■■■□□ 2.31
YBX1-202ENST00000332220 XPCQ01831 940 aaPredicted RBP29.47■■■□□ 2.31
YBX1-202ENST00000332220 CCDC61Q9Y6R9 512 aa29.47■■■□□ 2.31
YBX1-202ENST00000332220 AKAP12Q02952 1782 aa29.47■■■□□ 2.31
YBX1-202ENST00000332220 PPIP5K1Q6PFW1 1433 aa29.46■■■□□ 2.31
YBX1-202ENST00000332220 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
YBX1-202ENST00000332220 HSPA5P11021 654 aaKnown RBP29.44■■■□□ 2.3
YBX1-202ENST00000332220 EIF4G2P78344 907 aaKnown RBP eCLIP29.44■■■□□ 2.3
YBX1-202ENST00000332220 PLEKHG3A1L390 1219 aa29.41■■■□□ 2.3
YBX1-202ENST00000332220 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
YBX1-202ENST00000332220 POLR3AO14802 1390 aaPredicted RBP29.4■■■□□ 2.3
YBX1-202ENST00000332220 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
YBX1-202ENST00000332220 JCADQ9P266 1359 aa29.4■■■□□ 2.3
YBX1-202ENST00000332220 KRT28Q7Z3Y7 464 aa29.4■■■□□ 2.3
YBX1-202ENST00000332220 NGDNQ8NEJ9 315 aaKnown RBP29.39■■■□□ 2.3
YBX1-202ENST00000332220 LRRC59Q96AG4 307 aaKnown RBP29.39■■■□□ 2.3
YBX1-202ENST00000332220 COL22A1Q8NFW1 1626 aaPredicted RBP29.38■■■□□ 2.29
YBX1-202ENST00000332220 CABP1Q9NZU7 370 aa29.38■■■□□ 2.29
YBX1-202ENST00000332220 ACEP12821 1306 aa29.38■■■□□ 2.29
YBX1-202ENST00000332220 SLC24A1O60721 1099 aa29.37■■■□□ 2.29
YBX1-202ENST00000332220 TMF1P82094 1093 aa29.37■■■□□ 2.29
YBX1-202ENST00000332220 PSME1Q06323 249 aa29.37■■■□□ 2.29
YBX1-202ENST00000332220 PNPLA6Q8IY17 1366 aa29.37■■■□□ 2.29
YBX1-202ENST00000332220 MON2Q7Z3U7 1717 aa29.37■■■□□ 2.29
YBX1-202ENST00000332220 MYOM1P52179 1685 aa29.36■■■□□ 2.29
YBX1-202ENST00000332220 PUS7Q96PZ0 661 aaKnown RBP29.34■■■□□ 2.29
YBX1-202ENST00000332220 SPATA31A3Q5VYP0 1347 aa29.33■■■□□ 2.29
YBX1-202ENST00000332220 TNS3Q68CZ2 1445 aa29.33■■■□□ 2.29
YBX1-202ENST00000332220 ABCA3Q99758 1704 aa29.32■■■□□ 2.28
YBX1-202ENST00000332220 MED1Q15648 1581 aaPredicted RBP29.32■■■□□ 2.28
YBX1-202ENST00000332220 SBNO1A3KN83 1393 aa29.32■■■□□ 2.28
YBX1-202ENST00000332220 NRKQ7Z2Y5 1582 aa29.31■■■□□ 2.28
YBX1-202ENST00000332220 CD163L1Q9NR16 1453 aa29.3■■■□□ 2.28
YBX1-202ENST00000332220 CRYBG1Q9Y4K1 1723 aa29.29■■■□□ 2.28
YBX1-202ENST00000332220 LRP6O75581 1613 aa29.28■■■□□ 2.28
YBX1-202ENST00000332220 MARF1Q9Y4F3 1742 aaKnown RBP29.28■■■□□ 2.28
YBX1-202ENST00000332220 USP6P35125 1406 aa29.28■■■□□ 2.28
YBX1-202ENST00000332220 CPSF1Q10570 1443 aaKnown RBP29.28■■■□□ 2.28
YBX1-202ENST00000332220 TMC1Q8TDI8 760 aa29.27■■■□□ 2.28
YBX1-202ENST00000332220 SLC12A5Q9H2X9 1139 aa29.27■■■□□ 2.28
YBX1-202ENST00000332220 SPATA31A6Q5VVP1 1343 aa29.25■■■□□ 2.27
YBX1-202ENST00000332220 CDCA8Q53HL2 280 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms