RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
EPHB3-201ENST00000330394 BECN2A8MW95 431 aa17.12■□□□□ 0.33
EPHB3-201ENST00000330394 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
EPHB3-201ENST00000330394 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
EPHB3-201ENST00000330394 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
EPHB3-201ENST00000330394 DAPK1P53355 1430 aa17.12■□□□□ 0.33
EPHB3-201ENST00000330394 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
EPHB3-201ENST00000330394 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
EPHB3-201ENST00000330394 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
EPHB3-201ENST00000330394 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
EPHB3-201ENST00000330394 TNPO1Q92973 898 aaKnown RBP17.11■□□□□ 0.33
EPHB3-201ENST00000330394 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
EPHB3-201ENST00000330394 ERBINQ96RT1 1412 aa17.11■□□□□ 0.33
EPHB3-201ENST00000330394 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
EPHB3-201ENST00000330394 SPC24Q8NBT2 197 aa17.1■□□□□ 0.33
EPHB3-201ENST00000330394 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
EPHB3-201ENST00000330394 SSFA2P28290 1259 aa17.1■□□□□ 0.33
EPHB3-201ENST00000330394 RABEP1Q15276 862 aa17.1■□□□□ 0.33
EPHB3-201ENST00000330394 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
EPHB3-201ENST00000330394 RRAGDQ9NQL2 400 aaPredicted RBP17.09■□□□□ 0.33
EPHB3-201ENST00000330394 FIBPO43427 364 aa17.09■□□□□ 0.33
EPHB3-201ENST00000330394 CCAR2Q8N163 923 aaKnown RBP17.09■□□□□ 0.33
EPHB3-201ENST00000330394 SMC3Q9UQE7 1217 aa17.09■□□□□ 0.33
EPHB3-201ENST00000330394 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.32
EPHB3-201ENST00000330394 SYCE3A1L190 88 aa17.08■□□□□ 0.32
EPHB3-201ENST00000330394 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
EPHB3-201ENST00000330394 BICD2Q8TD16 824 aa17.08■□□□□ 0.32
EPHB3-201ENST00000330394 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
EPHB3-201ENST00000330394 EFCAB5A4FU69 1503 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
EPHB3-201ENST00000330394 H3BQV1 296 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 MBD3O95983 291 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
EPHB3-201ENST00000330394 SF3A1Q15459 793 aaKnown RBP17.07■□□□□ 0.32
EPHB3-201ENST00000330394 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 TSPY26PQ9H489 355 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
EPHB3-201ENST00000330394 TULP1O00294 542 aaPredicted RBP17.07■□□□□ 0.32
EPHB3-201ENST00000330394 MTERF4Q7Z6M4 381 aaKnown RBP17.07■□□□□ 0.32
EPHB3-201ENST00000330394 NPHP1O15259 732 aa17.06■□□□□ 0.32
EPHB3-201ENST00000330394 GNAI1P63096 354 aa17.06■□□□□ 0.32
EPHB3-201ENST00000330394 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
EPHB3-201ENST00000330394 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
EPHB3-201ENST00000330394 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
EPHB3-201ENST00000330394 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
EPHB3-201ENST00000330394 EPRSP07814 1512 aaKnown RBP17.05■□□□□ 0.32
EPHB3-201ENST00000330394 CLCN1P35523 988 aa17.05■□□□□ 0.32
EPHB3-201ENST00000330394 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
EPHB3-201ENST00000330394 SSH1Q8WYL5 1049 aa17.05■□□□□ 0.32
EPHB3-201ENST00000330394 FOSBP53539 338 aa17.05■□□□□ 0.32
EPHB3-201ENST00000330394 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
EPHB3-201ENST00000330394 AMPHP49418 695 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
EPHB3-201ENST00000330394 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 PODXL2Q9NZ53 605 aa17.04■□□□□ 0.32
EPHB3-201ENST00000330394 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
EPHB3-201ENST00000330394 COG3Q96JB2 828 aa17.03■□□□□ 0.32
EPHB3-201ENST00000330394 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
EPHB3-201ENST00000330394 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
EPHB3-201ENST00000330394 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
EPHB3-201ENST00000330394 TWISTNBQ3B726 338 aaPredicted RBP17.02■□□□□ 0.32
EPHB3-201ENST00000330394 ABCC5O15440 1437 aa17.02■□□□□ 0.32
EPHB3-201ENST00000330394 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
EPHB3-201ENST00000330394 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
EPHB3-201ENST00000330394 ZKSCAN1P17029 563 aaPredicted RBP17.01■□□□□ 0.31
EPHB3-201ENST00000330394 TPM4P67936 248 aa17.01■□□□□ 0.31
EPHB3-201ENST00000330394 TRIM5Q9C035 493 aa17.01■□□□□ 0.31
EPHB3-201ENST00000330394 PDCL3Q9H2J4 239 aa17.01■□□□□ 0.31
EPHB3-201ENST00000330394 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
EPHB3-201ENST00000330394 HOMER1Q86YM7 354 aa17.01■□□□□ 0.31
EPHB3-201ENST00000330394 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
EPHB3-201ENST00000330394 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
EPHB3-201ENST00000330394 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
EPHB3-201ENST00000330394 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
EPHB3-201ENST00000330394 CBX1P83916 185 aa16.99■□□□□ 0.31
EPHB3-201ENST00000330394 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
EPHB3-201ENST00000330394 SASS6Q6UVJ0 657 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
EPHB3-201ENST00000330394 DISP3Q9P2K9 1392 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
EPHB3-201ENST00000330394 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 TRIM27P14373 513 aa16.98■□□□□ 0.31
EPHB3-201ENST00000330394 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
EPHB3-201ENST00000330394 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
EPHB3-201ENST00000330394 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 GDPD2Q9HCC8 539 aa16.97■□□□□ 0.31
EPHB3-201ENST00000330394 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
EPHB3-201ENST00000330394 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
EPHB3-201ENST00000330394 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
EPHB3-201ENST00000330394 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms