RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
GDF3-201ENST00000329913 C1orf167Q5SNV9 1468 aa14.29□□□□□ -0.12
GDF3-201ENST00000329913 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
GDF3-201ENST00000329913 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.13
GDF3-201ENST00000329913 NAIPQ13075 1403 aa14.26□□□□□ -0.13
GDF3-201ENST00000329913 NGLY1Q96IV0 654 aa14.26□□□□□ -0.13
GDF3-201ENST00000329913 KIF1BO60333 1816 aa14.25□□□□□ -0.13
GDF3-201ENST00000329913 NUTM2FA1L443 756 aa14.25□□□□□ -0.13
GDF3-201ENST00000329913 CDK12Q9NYV4 1490 aaPredicted RBP14.24□□□□□ -0.13
GDF3-201ENST00000329913 EP400Q96L91 3159 aa14.23□□□□□ -0.13
GDF3-201ENST00000329913 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
GDF3-201ENST00000329913 RBM6P78332 1123 aaKnown RBP14.23□□□□□ -0.13
GDF3-201ENST00000329913 PTCH1Q13635 1447 aa14.23□□□□□ -0.13
GDF3-201ENST00000329913 STK26Q9P289 416 aa14.22□□□□□ -0.13
GDF3-201ENST00000329913 USP21Q9UK80 565 aa14.21□□□□□ -0.13
GDF3-201ENST00000329913 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
GDF3-201ENST00000329913 SOS2Q07890 1332 aaPredicted RBP14.19□□□□□ -0.14
GDF3-201ENST00000329913 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 ESCO1Q5FWF5 840 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 PLEKHH1Q9ULM0 1364 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 PPLO60437 1756 aa14.19□□□□□ -0.14
GDF3-201ENST00000329913 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
GDF3-201ENST00000329913 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
GDF3-201ENST00000329913 LAMC1P11047 1609 aa14.17□□□□□ -0.14
GDF3-201ENST00000329913 FOXO3O43524 673 aa14.17□□□□□ -0.14
GDF3-201ENST00000329913 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
GDF3-201ENST00000329913 PXDNQ92626 1479 aa14.16□□□□□ -0.14
GDF3-201ENST00000329913 MYOM2P54296 1465 aa14.15□□□□□ -0.14
GDF3-201ENST00000329913 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
GDF3-201ENST00000329913 TRPC5Q9UL62 973 aaPredicted RBP14.15□□□□□ -0.14
GDF3-201ENST00000329913 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
GDF3-201ENST00000329913 ATRNO75882 1429 aa14.15□□□□□ -0.14
GDF3-201ENST00000329913 ATAD2Q6PL18 1390 aa14.14□□□□□ -0.15
GDF3-201ENST00000329913 RNF39Q9H2S5 420 aa14.14□□□□□ -0.15
GDF3-201ENST00000329913 COL22A1Q8NFW1 1626 aaPredicted RBP14.14□□□□□ -0.15
GDF3-201ENST00000329913 CDC42BPGQ6DT37 1551 aa14.13□□□□□ -0.15
GDF3-201ENST00000329913 BCL9LQ86UU0 1499 aa14.12□□□□□ -0.15
GDF3-201ENST00000329913 FNBP4Q8N3X1 1017 aaPredicted RBP14.12□□□□□ -0.15
GDF3-201ENST00000329913 NPHP3Q7Z494 1330 aa14.12□□□□□ -0.15
GDF3-201ENST00000329913 RPGRIP1LQ68CZ1 1315 aa14.11□□□□□ -0.15
GDF3-201ENST00000329913 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
GDF3-201ENST00000329913 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
GDF3-201ENST00000329913 CABLES1Q8TDN4 633 aa14.1□□□□□ -0.15
GDF3-201ENST00000329913 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
GDF3-201ENST00000329913 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.15
GDF3-201ENST00000329913 GLI3P10071 1580 aa14.08□□□□□ -0.16
GDF3-201ENST00000329913 LRPPRCP42704 1394 aaKnown RBP14.08□□□□□ -0.16
GDF3-201ENST00000329913 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
GDF3-201ENST00000329913 FMN2Q9NZ56 1722 aa14.07□□□□□ -0.16
GDF3-201ENST00000329913 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
GDF3-201ENST00000329913 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
GDF3-201ENST00000329913 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
GDF3-201ENST00000329913 GJD4Q96KN9 370 aaPredicted RBP14.06□□□□□ -0.16
GDF3-201ENST00000329913 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
GDF3-201ENST00000329913 DEFB132Q7Z7B7 95 aa14.05□□□□□ -0.16
GDF3-201ENST00000329913 TECPR2O15040 1411 aa14.05□□□□□ -0.16
GDF3-201ENST00000329913 PIK3C2GO75747 1445 aa14.05□□□□□ -0.16
GDF3-201ENST00000329913 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
GDF3-201ENST00000329913 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
GDF3-201ENST00000329913 HAP1P54257 671 aaPredicted RBP14.04□□□□□ -0.16
GDF3-201ENST00000329913 MPHOSPH9Q99550 1183 aa14.04□□□□□ -0.16
GDF3-201ENST00000329913 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
GDF3-201ENST00000329913 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
GDF3-201ENST00000329913 USP32Q8NFA0 1604 aa14.04□□□□□ -0.16
GDF3-201ENST00000329913 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
GDF3-201ENST00000329913 CCDC9Q9Y3X0 531 aaKnown RBP14.03□□□□□ -0.16
GDF3-201ENST00000329913 SLIT2O94813 1529 aa14.03□□□□□ -0.16
GDF3-201ENST00000329913 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
GDF3-201ENST00000329913 BRWD3Q6RI45 1802 aa14.02□□□□□ -0.16
GDF3-201ENST00000329913 ABCC11Q96J66 1382 aa14.02□□□□□ -0.17
GDF3-201ENST00000329913 UNC5CLQ8IV45 518 aa14.02□□□□□ -0.17
GDF3-201ENST00000329913 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.17
GDF3-201ENST00000329913 ANKRD30BQ9BXX2 1392 aa14.01□□□□□ -0.17
GDF3-201ENST00000329913 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
GDF3-201ENST00000329913 HIRIP3Q9BW71 556 aaPredicted RBP14.01□□□□□ -0.17
GDF3-201ENST00000329913 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
GDF3-201ENST00000329913 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
GDF3-201ENST00000329913 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
GDF3-201ENST00000329913 A0A0G2JS52 829 aa14□□□□□ -0.17
GDF3-201ENST00000329913 MYT1Q01538 1121 aa14□□□□□ -0.17
GDF3-201ENST00000329913 SEPT12Q8IYM1 358 aa14□□□□□ -0.17
GDF3-201ENST00000329913 TNKS1BP1Q9C0C2 1729 aaKnown RBP14□□□□□ -0.17
GDF3-201ENST00000329913 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
GDF3-201ENST00000329913 ABCA3Q99758 1704 aa13.99□□□□□ -0.17
GDF3-201ENST00000329913 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
GDF3-201ENST00000329913 FAM182BQ5T319 152 aa13.98□□□□□ -0.17
GDF3-201ENST00000329913 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
GDF3-201ENST00000329913 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
GDF3-201ENST00000329913 C14orf93Q9H972 538 aaKnown RBP13.96□□□□□ -0.17
GDF3-201ENST00000329913 MINK1Q8N4C8 1332 aaPredicted RBP13.95□□□□□ -0.18
GDF3-201ENST00000329913 NRXN1Q9ULB1 1477 aa13.95□□□□□ -0.18
GDF3-201ENST00000329913 FAM83GA6ND36 823 aa13.95□□□□□ -0.18
GDF3-201ENST00000329913 PSME1Q06323 249 aa13.95□□□□□ -0.18
GDF3-201ENST00000329913 FAM98CQ17RN3 349 aaKnown RBP13.95□□□□□ -0.18
GDF3-201ENST00000329913 POGKQ9P215 609 aa13.95□□□□□ -0.18
GDF3-201ENST00000329913 TRAK1Q9UPV9 953 aa13.95□□□□□ -0.18
GDF3-201ENST00000329913 VPS72Q15906 364 aa13.94□□□□□ -0.18
GDF3-201ENST00000329913 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms