RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 USB1Q9BQ65 265 aaKnown RBP3.8□□□□□ -1.8
CCDC144A-201ENST00000328495 GUCA2AQ02747 115 aa3.79□□□□□ -1.8
CCDC144A-201ENST00000328495 TBC1D2Q9BYX2 928 aa3.79□□□□□ -1.8
CCDC144A-201ENST00000328495 MOXD2PA6NHM9 499 aa3.79□□□□□ -1.8
CCDC144A-201ENST00000328495 FAM160A2Q8N612 972 aaPredicted RBP3.79□□□□□ -1.8
CCDC144A-201ENST00000328495 C6orf229H3BNL8 230 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 PPEF1O14829 653 aaPredicted RBP3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 GJA5P36382 358 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 TPRNQ4KMQ1 711 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 RETREG3Q86VR2 466 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 PRDM9Q9NQV7 894 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 NDUFV2P19404 249 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 IRX2Q9BZI1 471 aaPredicted RBP3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 KDM4CQ9H3R0 1056 aa3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 FCF1Q9Y324 198 aaKnown RBP3.78□□□□□ -1.8
CCDC144A-201ENST00000328495 SLC19A1P41440 591 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 RSBN1LQ6PCB5 846 aaPredicted RBP3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 SPDYE5A6NIY4 337 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 MMP16P51512 607 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 DDRGK1Q96HY6 314 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 RSPH6AQ9H0K4 717 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 GPBP1L1Q9HC44 474 aaPredicted RBP3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 PCDHGC3Q9UN70 934 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 SPTLC1O15269 473 aa3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 DXOO77932 396 aaKnown RBP3.77□□□□□ -1.81
CCDC144A-201ENST00000328495 JUNDP17535 347 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 MTMR2Q13614 643 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 RIC3Q7Z5B4 369 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 SYMPKQ92797 1274 aaKnown RBP3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 MYSM1Q5VVJ2 828 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 SHROOM4Q9ULL8 1493 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 NEUROD2Q15784 382 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 ZBTB3Q9H5J0 574 aa3.76□□□□□ -1.81
CCDC144A-201ENST00000328495 ZBTB24O43167 697 aaPredicted RBP3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 RPIAP49247 311 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 CLK2P49760 499 aaKnown RBP3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 LAPTM4AQ15012 233 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 PLA2G2CQ5R387 149 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 PRPF38BQ5VTL8 546 aaKnown RBP3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 SPRYD7Q5W111 196 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 LIAT1Q6ZQX7 453 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 TUSC1Q2TAM9 212 aa3.75□□□□□ -1.81
CCDC144A-201ENST00000328495 CSPP1Q1MSJ5 1256 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 ZNF697Q5TEC3 545 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 ZNF598Q86UK7 904 aaKnown RBP3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 CCDC24Q8N4L8 307 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR7Q8TB68 274 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 EMID1Q96A84 441 aaPredicted RBP3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 NUDT12Q9BQG2 462 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 FAM117AQ9C073 453 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 LIMD1Q9UGP4 676 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 PCDHB15Q9Y5E8 787 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 CD2BP2O95400 341 aaKnown RBP3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 HRCP23327 699 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 SH3D19Q5HYK7 790 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 DESI1Q6ICB0 168 aa3.74□□□□□ -1.81
CCDC144A-201ENST00000328495 HECW2Q9P2P5 1572 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 NUTM2BA6NNL0 878 aaPredicted RBP3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 NUTM2EB1AL46 878 aaPredicted RBP3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 PTPRNQ16849 979 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 NUTM2DQ5VT03 806 aaPredicted RBP3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 NUTM2AQ8IVF1 878 aaPredicted RBP3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 DISP3Q9P2K9 1392 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 GFRA3O60609 400 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 CCNYL3P0C7X3 344 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 CABLES1Q8TDN4 633 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 POLR3EQ9NVU0 708 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 PDZRN3Q9UPQ7 1066 aa3.73□□□□□ -1.81
CCDC144A-201ENST00000328495 SKIV2LQ15477 1246 aaKnown RBP3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 ATP1B4Q9UN42 357 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 BICRAQ9NZM4 1560 aa3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 NRG2O14511 850 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 TRIM32Q13049 653 aa3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 CFAP99D6REC4 459 aa3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 LILRB3O75022 631 aa3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 BRPF1P55201 1214 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 HELBQ8NG08 1087 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-201ENST00000328495 PLEKHG3A1L390 1219 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR20EP86478 221 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR20CP86479 221 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR20DP86480 221 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR20BP86481 221 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 PRR20AP86496 221 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 QPCTQ16769 361 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 TSC1Q92574 1164 aa3.71□□□□□ -1.81
CCDC144A-201ENST00000328495 Q6ZNB5 142 aa3.71□□□□□ -1.82
CCDC144A-201ENST00000328495 GDF9O60383 454 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 KCNH2Q12809 1159 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 FOXC1Q12948 553 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 LYPD8Q6UX82 237 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 TRIM67Q6ZTA4 783 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 EVA1BQ9NVM1 165 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 TNFRSF10AO00220 468 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 CTHP32929 405 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 WNT7BP56706 349 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 RIMBP3CA6NJZ7 1639 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 RIMBP3BA6NNM3 1639 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 RIMBP3Q9UFD9 1639 aa3.7□□□□□ -1.82
CCDC144A-201ENST00000328495 WNT7AO00755 349 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms