RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 TSPOAP1O95153 1857 aa12.2□□□□□ -0.46
DDX53-201ENST00000327968 TMF1P82094 1093 aa12.2□□□□□ -0.46
DDX53-201ENST00000327968 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX53-201ENST00000327968 FAM69CQ0P6D2 419 aa12.19□□□□□ -0.46
DDX53-201ENST00000327968 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
DDX53-201ENST00000327968 ABCC3O15438 1527 aa12.19□□□□□ -0.46
DDX53-201ENST00000327968 ARHGAP31Q2M1Z3 1444 aa12.19□□□□□ -0.46
DDX53-201ENST00000327968 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
DDX53-201ENST00000327968 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
DDX53-201ENST00000327968 TPRNQ4KMQ1 711 aa12.18□□□□□ -0.46
DDX53-201ENST00000327968 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
DDX53-201ENST00000327968 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
DDX53-201ENST00000327968 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
DDX53-201ENST00000327968 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
DDX53-201ENST00000327968 POLR1AO95602 1720 aaPredicted RBP12.16□□□□□ -0.46
DDX53-201ENST00000327968 TBC1D2Q9BYX2 928 aa12.16□□□□□ -0.46
DDX53-201ENST00000327968 IFT172Q9UG01 1749 aa12.16□□□□□ -0.46
DDX53-201ENST00000327968 DISP3Q9P2K9 1392 aa12.16□□□□□ -0.46
DDX53-201ENST00000327968 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
DDX53-201ENST00000327968 CLTCL1P53675 1640 aa12.15□□□□□ -0.46
DDX53-201ENST00000327968 PPP6R1Q9UPN7 881 aa12.15□□□□□ -0.46
DDX53-201ENST00000327968 RBM10P98175 930 aaKnown RBP12.15□□□□□ -0.47
DDX53-201ENST00000327968 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
DDX53-201ENST00000327968 TRAK2O60296 914 aa12.14□□□□□ -0.47
DDX53-201ENST00000327968 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
DDX53-201ENST00000327968 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
DDX53-201ENST00000327968 CENPJQ9HC77 1338 aaPredicted RBP12.13□□□□□ -0.47
DDX53-201ENST00000327968 PDZRN3Q9UPQ7 1066 aa12.13□□□□□ -0.47
DDX53-201ENST00000327968 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
DDX53-201ENST00000327968 KIF1BO60333 1816 aa12.13□□□□□ -0.47
DDX53-201ENST00000327968 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
DDX53-201ENST00000327968 MROH2AA6NES4 1674 aa12.12□□□□□ -0.47
DDX53-201ENST00000327968 YEATS2Q9ULM3 1422 aa12.12□□□□□ -0.47
DDX53-201ENST00000327968 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
DDX53-201ENST00000327968 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
DDX53-201ENST00000327968 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
DDX53-201ENST00000327968 MCM4P33991 863 aa12.11□□□□□ -0.47
DDX53-201ENST00000327968 ADGRB3O60242 1522 aa12.11□□□□□ -0.47
DDX53-201ENST00000327968 SIGLEC1Q9BZZ2 1709 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 NOS1P29475 1434 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 USP19O94966 1318 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 MYOM2P54296 1465 aa12.1□□□□□ -0.47
DDX53-201ENST00000327968 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
DDX53-201ENST00000327968 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
DDX53-201ENST00000327968 PREX1Q8TCU6 1659 aa12.09□□□□□ -0.47
DDX53-201ENST00000327968 MADDQ8WXG6 1647 aa12.09□□□□□ -0.47
DDX53-201ENST00000327968 HSCBQ8IWL3 235 aa12.09□□□□□ -0.47
DDX53-201ENST00000327968 RLBP1P12271 317 aa12.09□□□□□ -0.47
DDX53-201ENST00000327968 KDM5AP29375 1690 aaKnown RBP12.08□□□□□ -0.48
DDX53-201ENST00000327968 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
DDX53-201ENST00000327968 C22orf23Q9BZE7 217 aa12.08□□□□□ -0.48
DDX53-201ENST00000327968 KIF3BO15066 747 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 SYNMO15061 1565 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 NPATQ14207 1427 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
DDX53-201ENST00000327968 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
DDX53-201ENST00000327968 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
DDX53-201ENST00000327968 ESPNB1AK53 854 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 MPNDQ8N594 471 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 SPATA31D1Q6ZQQ2 1576 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 GPRASP1Q5JY77 1395 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 TESK2Q96S53 571 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 GRPEL1Q9HAV7 217 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 PPLO60437 1756 aa12.06□□□□□ -0.48
DDX53-201ENST00000327968 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
DDX53-201ENST00000327968 E9PSI1 815 aa12.05□□□□□ -0.48
DDX53-201ENST00000327968 CGNL1Q0VF96 1302 aa12.05□□□□□ -0.48
DDX53-201ENST00000327968 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
DDX53-201ENST00000327968 A0A0U1RQG5 324 aaPredicted RBP12.04□□□□□ -0.48
DDX53-201ENST00000327968 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX53-201ENST00000327968 LNPKQ9C0E8 428 aa12.04□□□□□ -0.48
DDX53-201ENST00000327968 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
DDX53-201ENST00000327968 ANP32BQ92688 251 aaKnown RBP12.04□□□□□ -0.48
DDX53-201ENST00000327968 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
DDX53-201ENST00000327968 CLTCQ00610 1675 aaKnown RBP12.03□□□□□ -0.48
DDX53-201ENST00000327968 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
DDX53-201ENST00000327968 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
DDX53-201ENST00000327968 IQGAP1P46940 1657 aa12.03□□□□□ -0.48
DDX53-201ENST00000327968 APBB1O00213 710 aa12.03□□□□□ -0.48
DDX53-201ENST00000327968 TBC1D32Q96NH3 1257 aa12.03□□□□□ -0.48
DDX53-201ENST00000327968 MRE11P49959 708 aa12.02□□□□□ -0.49
DDX53-201ENST00000327968 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.49
DDX53-201ENST00000327968 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.49
DDX53-201ENST00000327968 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
DDX53-201ENST00000327968 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.49
DDX53-201ENST00000327968 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
DDX53-201ENST00000327968 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 U2AF1L5P0DN76 240 aaPredicted RBP12.01□□□□□ -0.49
DDX53-201ENST00000327968 U2AF1Q01081 240 aaKnown RBP eCLIP12.01□□□□□ -0.49
DDX53-201ENST00000327968 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 CLCN1P35523 988 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 GAS2L3Q86XJ1 694 aa12.01□□□□□ -0.49
DDX53-201ENST00000327968 R3HCC1Q9Y3T6 440 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms