RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 CDC42BPGQ6DT37 1551 aa30.66■■■□□ 2.5
CFD-201ENST00000327726 HRCP23327 699 aa30.65■■■□□ 2.5
CFD-201ENST00000327726 LAMC1P11047 1609 aa30.65■■■□□ 2.5
CFD-201ENST00000327726 MYOM2P54296 1465 aa30.64■■■□□ 2.5
CFD-201ENST00000327726 PNPLA6Q8IY17 1366 aa30.64■■■□□ 2.5
CFD-201ENST00000327726 KNDC1Q76NI1 1749 aa30.64■■■□□ 2.5
CFD-201ENST00000327726 WAPLQ7Z5K2 1190 aa30.63■■■□□ 2.49
CFD-201ENST00000327726 C14orf93Q9H972 538 aaKnown RBP30.63■■■□□ 2.49
CFD-201ENST00000327726 YTHDC2Q9H6S0 1430 aaKnown RBP30.63■■■□□ 2.49
CFD-201ENST00000327726 NRXN1Q9ULB1 1477 aa30.63■■■□□ 2.49
CFD-201ENST00000327726 SOS2Q07890 1332 aaPredicted RBP30.61■■■□□ 2.49
CFD-201ENST00000327726 DHX57Q6P158 1386 aaKnown RBP30.59■■■□□ 2.49
CFD-201ENST00000327726 ESCO1Q5FWF5 840 aa30.59■■■□□ 2.49
CFD-201ENST00000327726 SIRT1Q96EB6 747 aa30.59■■■□□ 2.49
CFD-201ENST00000327726 NPHP3Q7Z494 1330 aa30.56■■■□□ 2.48
CFD-201ENST00000327726 CFAP70Q5T0N1 1121 aa30.56■■■□□ 2.48
CFD-201ENST00000327726 PLEKHH1Q9ULM0 1364 aa30.55■■■□□ 2.48
CFD-201ENST00000327726 AFF2P51816 1311 aa30.53■■■□□ 2.48
CFD-201ENST00000327726 C8orf37Q96NL8 207 aa30.51■■■□□ 2.47
CFD-201ENST00000327726 NUTM2FA1L443 756 aa30.5■■■□□ 2.47
CFD-201ENST00000327726 RXRBP28702 533 aa30.5■■■□□ 2.47
CFD-201ENST00000327726 STAC3Q96MF2 364 aa30.5■■■□□ 2.47
CFD-201ENST00000327726 FOXO3O43524 673 aa30.47■■■□□ 2.47
CFD-201ENST00000327726 FMN2Q9NZ56 1722 aa30.47■■■□□ 2.47
CFD-201ENST00000327726 DCAF11Q8TEB1 546 aa30.46■■■□□ 2.47
CFD-201ENST00000327726 PXDNQ92626 1479 aa30.45■■■□□ 2.47
CFD-201ENST00000327726 ADAMTS2O95450 1211 aa30.45■■■□□ 2.47
CFD-201ENST00000327726 NGLY1Q96IV0 654 aa30.45■■■□□ 2.47
CFD-201ENST00000327726 PRAM1Q96QH2 718 aa30.44■■■□□ 2.46
CFD-201ENST00000327726 KDM2AQ9Y2K7 1162 aa30.44■■■□□ 2.46
CFD-201ENST00000327726 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
CFD-201ENST00000327726 POGKQ9P215 609 aa30.43■■■□□ 2.46
CFD-201ENST00000327726 COL22A1Q8NFW1 1626 aaPredicted RBP30.43■■■□□ 2.46
CFD-201ENST00000327726 CDK12Q9NYV4 1490 aaPredicted RBP30.41■■■□□ 2.46
CFD-201ENST00000327726 KIF1AQ12756 1690 aa30.41■■■□□ 2.46
CFD-201ENST00000327726 XPCQ01831 940 aaPredicted RBP30.4■■■□□ 2.46
CFD-201ENST00000327726 SAFB2Q14151 953 aaKnown RBP eCLIP30.4■■■□□ 2.463e-7■■□□□ 13
CFD-201ENST00000327726 QTRT2Q9H974 415 aaKnown RBP30.4■■■□□ 2.46
CFD-201ENST00000327726 ADGRB1O14514 1584 aa30.39■■■□□ 2.46
CFD-201ENST00000327726 RBM6P78332 1123 aaKnown RBP30.36■■■□□ 2.45
CFD-201ENST00000327726 TRAK1Q9UPV9 953 aa30.36■■■□□ 2.45
CFD-201ENST00000327726 TRIM26Q12899 539 aaPredicted RBP30.35■■■□□ 2.45
CFD-201ENST00000327726 PHF8Q9UPP1 1060 aa30.35■■■□□ 2.45
CFD-201ENST00000327726 KRT28Q7Z3Y7 464 aa30.33■■■□□ 2.45
CFD-201ENST00000327726 USP21Q9UK80 565 aa30.33■■■□□ 2.45
CFD-201ENST00000327726 PSME1Q06323 249 aa30.32■■■□□ 2.44
CFD-201ENST00000327726 FNBP4Q8N3X1 1017 aaPredicted RBP30.32■■■□□ 2.44
CFD-201ENST00000327726 SPATA31A3Q5VYP0 1347 aa30.31■■■□□ 2.44
CFD-201ENST00000327726 ANKARQ7Z5J8 1434 aa30.3■■■□□ 2.44
CFD-201ENST00000327726 ADGRB2O60241 1585 aa30.3■■■□□ 2.44
CFD-201ENST00000327726 TRPC5Q9UL62 973 aaPredicted RBP30.29■■■□□ 2.44
CFD-201ENST00000327726 RGPD8O14715 1765 aaPredicted RBP30.28■■■□□ 2.44
CFD-201ENST00000327726 EIF3AQ14152 1382 aaKnown RBP30.28■■■□□ 2.44
CFD-201ENST00000327726 UPF1Q92900 1129 aaKnown RBP eCLIP30.25■■■□□ 2.438e-7■■■□□ 14.9
CFD-201ENST00000327726 MINK1Q8N4C8 1332 aaPredicted RBP30.24■■■□□ 2.43
CFD-201ENST00000327726 RGS12O14924 1447 aa30.24■■■□□ 2.43
CFD-201ENST00000327726 TNS3Q68CZ2 1445 aa30.24■■■□□ 2.43
CFD-201ENST00000327726 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
CFD-201ENST00000327726 MARF1Q9Y4F3 1742 aaKnown RBP30.23■■■□□ 2.43
CFD-201ENST00000327726 SBNO1A3KN83 1393 aa30.22■■■□□ 2.43
CFD-201ENST00000327726 PMFBP1Q8TBY8 1022 aa30.21■■■□□ 2.43
CFD-201ENST00000327726 WASLO00401 505 aaPredicted RBP30.2■■■□□ 2.43
CFD-201ENST00000327726 USP32Q8NFA0 1604 aa30.2■■■□□ 2.43
CFD-201ENST00000327726 ATRNO75882 1429 aa30.2■■■□□ 2.42
CFD-201ENST00000327726 ARHGEF10O15013 1369 aa30.19■■■□□ 2.42
CFD-201ENST00000327726 HAP1P54257 671 aaPredicted RBP30.19■■■□□ 2.42
CFD-201ENST00000327726 TULP4Q9NRJ4 1543 aa30.18■■■□□ 2.42
CFD-201ENST00000327726 LMOD2Q6P5Q4 547 aa30.17■■■□□ 2.42
CFD-201ENST00000327726 BCL9LQ86UU0 1499 aa30.17■■■□□ 2.42
CFD-201ENST00000327726 ARHGEF28Q8N1W1 1705 aaKnown RBP30.16■■■□□ 2.42
CFD-201ENST00000327726 GPRASP1Q5JY77 1395 aa30.15■■■□□ 2.42
CFD-201ENST00000327726 KIAA1210Q9ULL0 1709 aa30.15■■■□□ 2.42
CFD-201ENST00000327726 PRR36Q9H6K5 1346 aa30.13■■■□□ 2.41
CFD-201ENST00000327726 UNC5CLQ8IV45 518 aa30.11■■■□□ 2.41
CFD-201ENST00000327726 CABLES1Q8TDN4 633 aa30.1■■■□□ 2.41
CFD-201ENST00000327726 GJD4Q96KN9 370 aaPredicted RBP30.1■■■□□ 2.41
CFD-201ENST00000327726 SLIT2O94813 1529 aa30.1■■■□□ 2.41
CFD-201ENST00000327726 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.1■■■□□ 2.41
CFD-201ENST00000327726 NGDNQ8NEJ9 315 aaKnown RBP30.09■■■□□ 2.41
CFD-201ENST00000327726 ATAD2Q6PL18 1390 aa30.08■■■□□ 2.41
CFD-201ENST00000327726 PLEKHG5O94827 1062 aa30.07■■■□□ 2.4
CFD-201ENST00000327726 NUDT16Q96DE0 195 aaKnown RBP30.05■■■□□ 2.4
CFD-201ENST00000327726 TRPM3Q9HCF6 1732 aaPredicted RBP30.05■■■□□ 2.4
CFD-201ENST00000327726 NBPF1Q3BBV0 1214 aa30.04■■■□□ 2.4
CFD-201ENST00000327726 CDK19Q9BWU1 502 aa30.04■■■□□ 2.4
CFD-201ENST00000327726 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
CFD-201ENST00000327726 ATP7BP35670 1465 aa30.03■■■□□ 2.4
CFD-201ENST00000327726 ABCA3Q99758 1704 aa30.02■■■□□ 2.4
CFD-201ENST00000327726 PAK3O75914 559 aaPredicted RBP30■■■□□ 2.39
CFD-201ENST00000327726 ALS2Q96Q42 1657 aa30■■■□□ 2.39
CFD-201ENST00000327726 RALGAPBQ86X10 1494 aa29.99■■■□□ 2.39
CFD-201ENST00000327726 L3MBTL2Q969R5 705 aa29.99■■■□□ 2.39
CFD-201ENST00000327726 NWD2Q9ULI1 1742 aa29.99■■■□□ 2.39
CFD-201ENST00000327726 VPS72Q15906 364 aa29.98■■■□□ 2.39
CFD-201ENST00000327726 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
CFD-201ENST00000327726 CCDC61Q9Y6R9 512 aa29.97■■■□□ 2.39
CFD-201ENST00000327726 PLCH1Q4KWH8 1693 aa29.97■■■□□ 2.39
CFD-201ENST00000327726 FAM83GA6ND36 823 aa29.96■■■□□ 2.39
CFD-201ENST00000327726 CENPJQ9HC77 1338 aaPredicted RBP29.96■■■□□ 2.39
CFD-201ENST00000327726 GLI3P10071 1580 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms