RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 MYO3AQ8NEV4 1616 aa12.75□□□□□ -0.37
SP1-201ENST00000327443 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
SP1-201ENST00000327443 HOMEZQ8IX15 550 aa12.75□□□□□ -0.37
SP1-201ENST00000327443 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SP1-201ENST00000327443 EIF4G2P78344 907 aaKnown RBP eCLIP12.74□□□□□ -0.37
SP1-201ENST00000327443 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
SP1-201ENST00000327443 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
SP1-201ENST00000327443 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SP1-201ENST00000327443 SMAP1Q8IYB5 467 aaPredicted RBP12.73□□□□□ -0.37
SP1-201ENST00000327443 SLC52A1Q9NWF4 448 aa12.73□□□□□ -0.37
SP1-201ENST00000327443 TPM2P07951 284 aa12.72□□□□□ -0.37
SP1-201ENST00000327443 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
SP1-201ENST00000327443 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.37
SP1-201ENST00000327443 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
SP1-201ENST00000327443 ARID3AQ99856 593 aa12.69□□□□□ -0.38
SP1-201ENST00000327443 PDE4AP27815 886 aa12.69□□□□□ -0.38
SP1-201ENST00000327443 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
SP1-201ENST00000327443 USP47Q96K76 1375 aa12.68□□□□□ -0.38
SP1-201ENST00000327443 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
SP1-201ENST00000327443 POGKQ9P215 609 aa12.68□□□□□ -0.38
SP1-201ENST00000327443 ANP32BQ92688 251 aaKnown RBP12.68□□□□□ -0.38
SP1-201ENST00000327443 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
SP1-201ENST00000327443 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
SP1-201ENST00000327443 FER1L4A9Z1Z3 1794 aa12.67□□□□□ -0.38
SP1-201ENST00000327443 HSPA5P11021 654 aaKnown RBP12.66□□□□□ -0.38
SP1-201ENST00000327443 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
SP1-201ENST00000327443 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
SP1-201ENST00000327443 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
SP1-201ENST00000327443 GGT6Q6P531 493 aa12.65□□□□□ -0.38
SP1-201ENST00000327443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
SP1-201ENST00000327443 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
SP1-201ENST00000327443 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
SP1-201ENST00000327443 CNPY4Q8N129 248 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 C3P01024 1663 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 ADAMTSL3P82987 1691 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 MYO5BQ9ULV0 1848 aa12.63□□□□□ -0.39
SP1-201ENST00000327443 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
SP1-201ENST00000327443 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
SP1-201ENST00000327443 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
SP1-201ENST00000327443 DMTNQ08495 405 aa12.62□□□□□ -0.39
SP1-201ENST00000327443 BCCIPQ9P287 314 aaKnown RBP eCLIP12.62□□□□□ -0.39
SP1-201ENST00000327443 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 E9PSI1 815 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
SP1-201ENST00000327443 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
SP1-201ENST00000327443 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
SP1-201ENST00000327443 A2ML1A8K2U0 1454 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
SP1-201ENST00000327443 ZNF142P52746 1687 aaPredicted RBP12.6□□□□□ -0.39
SP1-201ENST00000327443 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
SP1-201ENST00000327443 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
SP1-201ENST00000327443 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
SP1-201ENST00000327443 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
SP1-201ENST00000327443 ESPNB1AK53 854 aa12.59□□□□□ -0.39
SP1-201ENST00000327443 ZBTB22O15209 634 aa12.59□□□□□ -0.39
SP1-201ENST00000327443 MAP7D2Q96T17 732 aa12.59□□□□□ -0.39
SP1-201ENST00000327443 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.39
SP1-201ENST00000327443 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
SP1-201ENST00000327443 RIPK4P57078 832 aa12.58□□□□□ -0.4
SP1-201ENST00000327443 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
SP1-201ENST00000327443 CDK11BP21127 795 aaKnown RBP12.58□□□□□ -0.4
SP1-201ENST00000327443 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
SP1-201ENST00000327443 SLIT1O75093 1534 aa12.58□□□□□ -0.4
SP1-201ENST00000327443 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 TNRQ92752 1358 aa12.57□□□□□ -0.4
SP1-201ENST00000327443 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
SP1-201ENST00000327443 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
SP1-201ENST00000327443 DNTTIP2Q5QJE6 756 aaKnown RBP12.56□□□□□ -0.4
SP1-201ENST00000327443 ARHGAP23Q9P227 1491 aa12.56□□□□□ -0.4
SP1-201ENST00000327443 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
SP1-201ENST00000327443 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
SP1-201ENST00000327443 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
SP1-201ENST00000327443 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
SP1-201ENST00000327443 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
SP1-201ENST00000327443 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
SP1-201ENST00000327443 IDI1Q13907 227 aa12.55□□□□□ -0.4
SP1-201ENST00000327443 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
SP1-201ENST00000327443 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
SP1-201ENST00000327443 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
SP1-201ENST00000327443 ASXL1Q8IXJ9 1541 aa12.54□□□□□ -0.4
SP1-201ENST00000327443 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
SP1-201ENST00000327443 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
SP1-201ENST00000327443 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
SP1-201ENST00000327443 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.4
SP1-201ENST00000327443 TESK2Q96S53 571 aa12.52□□□□□ -0.4
SP1-201ENST00000327443 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.4
SP1-201ENST00000327443 MYOM1P52179 1685 aa12.52□□□□□ -0.41
SP1-201ENST00000327443 ADGRF5Q8IZF2 1346 aa12.52□□□□□ -0.41
SP1-201ENST00000327443 ESF1Q9H501 851 aaKnown RBP12.52□□□□□ -0.41
SP1-201ENST00000327443 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
SP1-201ENST00000327443 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms