RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 ARHGEF28Q8N1W1 1705 aaKnown RBP28.61■■■□□ 2.17
ITM2C-202ENST00000326427 BCAR3O75815 825 aa28.61■■■□□ 2.17
ITM2C-202ENST00000326427 WWC1Q8IX03 1113 aa28.6■■■□□ 2.17
ITM2C-202ENST00000326427 FAM161AQ3B820 660 aa28.59■■■□□ 2.17
ITM2C-202ENST00000326427 MORC1Q86VD1 984 aa28.59■■■□□ 2.17
ITM2C-202ENST00000326427 C8orf34Q49A92 452 aa28.57■■■□□ 2.16
ITM2C-202ENST00000326427 PUS7Q96PZ0 661 aaKnown RBP28.57■■■□□ 2.16
ITM2C-202ENST00000326427 SLC12A5Q9H2X9 1139 aa28.57■■■□□ 2.16
ITM2C-202ENST00000326427 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
ITM2C-202ENST00000326427 PDE3AQ14432 1141 aa28.57■■■□□ 2.16
ITM2C-202ENST00000326427 VIRMAQ69YN4 1812 aaKnown RBP28.56■■■□□ 2.16
ITM2C-202ENST00000326427 NEXMIFQ5QGS0 1516 aa28.56■■■□□ 2.16
ITM2C-202ENST00000326427 GGT6Q6P531 493 aa28.56■■■□□ 2.16
ITM2C-202ENST00000326427 USP35Q9P2H5 1018 aa28.56■■■□□ 2.16
ITM2C-202ENST00000326427 CGNL1Q0VF96 1302 aa28.55■■■□□ 2.16
ITM2C-202ENST00000326427 RUNDC1Q96C34 613 aa28.54■■■□□ 2.16
ITM2C-202ENST00000326427 TULP4Q9NRJ4 1543 aa28.54■■■□□ 2.16
ITM2C-202ENST00000326427 PPM1GO15355 546 aaPredicted RBP28.54■■■□□ 2.16
ITM2C-202ENST00000326427 PHF23Q9BUL5 403 aaPredicted RBP28.54■■■□□ 2.16
ITM2C-202ENST00000326427 TMEM132EQ6IEE7 984 aa28.52■■■□□ 2.16
ITM2C-202ENST00000326427 NEO1Q92859 1461 aa28.51■■■□□ 2.15
ITM2C-202ENST00000326427 NSD2O96028 1365 aa28.51■■■□□ 2.15
ITM2C-202ENST00000326427 LAS1LQ9Y4W2 734 aaKnown RBP28.5■■■□□ 2.15
ITM2C-202ENST00000326427 DIP2CQ9Y2E4 1556 aa28.5■■■□□ 2.15
ITM2C-202ENST00000326427 ANKRD36BQ8N2N9 1353 aa28.49■■■□□ 2.15
ITM2C-202ENST00000326427 ARHGAP31Q2M1Z3 1444 aa28.48■■■□□ 2.15
ITM2C-202ENST00000326427 EVC2Q86UK5 1308 aa28.47■■■□□ 2.15
ITM2C-202ENST00000326427 NCBP3Q53F19 620 aaKnown RBP28.47■■■□□ 2.15
ITM2C-202ENST00000326427 NEFMP07197 916 aa28.46■■■□□ 2.15
ITM2C-202ENST00000326427 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
ITM2C-202ENST00000326427 WDR63Q8IWG1 891 aa28.46■■■□□ 2.15
ITM2C-202ENST00000326427 VGFO15240 615 aaPredicted RBP28.46■■■□□ 2.15
ITM2C-202ENST00000326427 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
ITM2C-202ENST00000326427 TNNT2P45379 298 aaPredicted RBP28.44■■■□□ 2.14
ITM2C-202ENST00000326427 MTHFSP49914 203 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 ADGRB2O60241 1585 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 ZFYVE9O95405 1425 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 IGHDP01880 384 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 RGS3P49796 1198 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 CLUAP1Q96AJ1 413 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 CFAP53Q96M91 514 aa28.44■■■□□ 2.14
ITM2C-202ENST00000326427 RICTORQ6R327 1708 aa28.42■■■□□ 2.14
ITM2C-202ENST00000326427 RARSP54136 660 aaKnown RBP28.41■■■□□ 2.14
ITM2C-202ENST00000326427 AAMPQ13685 434 aa28.41■■■□□ 2.14
ITM2C-202ENST00000326427 CANXP27824 592 aaKnown RBP28.39■■■□□ 2.14
ITM2C-202ENST00000326427 PANK1Q8TE04 598 aa28.39■■■□□ 2.14
ITM2C-202ENST00000326427 RRP7AQ9Y3A4 280 aaKnown RBP28.39■■■□□ 2.14
ITM2C-202ENST00000326427 COG6Q9Y2V7 657 aa28.38■■■□□ 2.13
ITM2C-202ENST00000326427 NEUROD2Q15784 382 aa28.38■■■□□ 2.13
ITM2C-202ENST00000326427 MYO5BQ9ULV0 1848 aa28.37■■■□□ 2.13
ITM2C-202ENST00000326427 OSCARQ8IYS5 282 aa28.37■■■□□ 2.13
ITM2C-202ENST00000326427 MAPK8IP3Q9UPT6 1336 aa28.36■■■□□ 2.13
ITM2C-202ENST00000326427 ANKRD26Q9UPS8 1709 aa28.36■■■□□ 2.13
ITM2C-202ENST00000326427 ABCC11Q96J66 1382 aa28.35■■■□□ 2.13
ITM2C-202ENST00000326427 RAPGEF3O95398 923 aa28.34■■■□□ 2.13
ITM2C-202ENST00000326427 CLTCQ00610 1675 aaKnown RBP28.34■■■□□ 2.13
ITM2C-202ENST00000326427 PREX1Q8TCU6 1659 aa28.33■■■□□ 2.13
ITM2C-202ENST00000326427 TMEM131LA2VDJ0 1609 aa28.33■■■□□ 2.13
ITM2C-202ENST00000326427 NUTM2DQ5VT03 806 aaPredicted RBP28.32■■■□□ 2.12
ITM2C-202ENST00000326427 FRAT1Q92837 279 aaPredicted RBP28.31■■■□□ 2.12
ITM2C-202ENST00000326427 DAXXQ9UER7 740 aaPredicted RBP28.31■■■□□ 2.12
ITM2C-202ENST00000326427 IDI1Q13907 227 aa28.31■■■□□ 2.12
ITM2C-202ENST00000326427 CABP2Q9NPB3 220 aa28.31■■■□□ 2.12
ITM2C-202ENST00000326427 SLC52A1Q9NWF4 448 aa28.31■■■□□ 2.12
ITM2C-202ENST00000326427 A0A1W2PP64 1363 aa28.31■■■□□ 2.12
ITM2C-202ENST00000326427 MYH16Q9H6N6 1097 aa28.3■■■□□ 2.12
ITM2C-202ENST00000326427 PTPRMP28827 1452 aa28.3■■■□□ 2.12
ITM2C-202ENST00000326427 PMFBP1Q8TBY8 1022 aa28.3■■■□□ 2.12
ITM2C-202ENST00000326427 ZMYM3Q14202 1370 aa28.29■■■□□ 2.12
ITM2C-202ENST00000326427 COL3A1P02461 1466 aaPredicted RBP28.29■■■□□ 2.12
ITM2C-202ENST00000326427 SLC4A3P48751 1232 aa28.29■■■□□ 2.12
ITM2C-202ENST00000326427 MED14O60244 1454 aa28.28■■■□□ 2.12
ITM2C-202ENST00000326427 RLBP1P12271 317 aa28.27■■■□□ 2.12
ITM2C-202ENST00000326427 U2AF1L5P0DN76 240 aaPredicted RBP28.27■■■□□ 2.12
ITM2C-202ENST00000326427 U2AF1Q01081 240 aaKnown RBP eCLIP28.27■■■□□ 2.12
ITM2C-202ENST00000326427 USP19O94966 1318 aa28.26■■■□□ 2.11
ITM2C-202ENST00000326427 NFKBIBQ15653 356 aa28.25■■■□□ 2.11
ITM2C-202ENST00000326427 ATAD2Q6PL18 1390 aa28.24■■■□□ 2.11
ITM2C-202ENST00000326427 CT47B1P0C2W7 299 aaPredicted RBP28.24■■■□□ 2.11
ITM2C-202ENST00000326427 YEATS2Q9ULM3 1422 aa28.23■■■□□ 2.11
ITM2C-202ENST00000326427 PCDHB15Q9Y5E8 787 aa28.23■■■□□ 2.11
ITM2C-202ENST00000326427 NLRP1Q9C000 1473 aa28.22■■■□□ 2.11
ITM2C-202ENST00000326427 CD163L1Q9NR16 1453 aa28.22■■■□□ 2.11
ITM2C-202ENST00000326427 TNNQ9UQP3 1299 aa28.22■■■□□ 2.11
ITM2C-202ENST00000326427 PLEKHF1Q96S99 279 aa28.22■■■□□ 2.11
ITM2C-202ENST00000326427 YTHDC2Q9H6S0 1430 aaKnown RBP28.19■■■□□ 2.1
ITM2C-202ENST00000326427 SRPK2P78362 688 aaKnown RBP28.19■■■□□ 2.1
ITM2C-202ENST00000326427 SAFB2Q14151 953 aaKnown RBP eCLIP28.19■■■□□ 2.1
ITM2C-202ENST00000326427 BCL2L13Q9BXK5 485 aa28.19■■■□□ 2.1
ITM2C-202ENST00000326427 KIF20BQ96Q89 1820 aa28.18■■■□□ 2.1
ITM2C-202ENST00000326427 TERF2IPQ9NYB0 399 aa28.17■■■□□ 2.1
ITM2C-202ENST00000326427 STK26Q9P289 416 aa28.17■■■□□ 2.1
ITM2C-202ENST00000326427 MVPQ14764 893 aaKnown RBP28.16■■■□□ 2.1
ITM2C-202ENST00000326427 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
ITM2C-202ENST00000326427 ZKSCAN2Q63HK3 967 aa28.15■■■□□ 2.1
ITM2C-202ENST00000326427 GGNBP2Q9H3C7 697 aa28.15■■■□□ 2.1
ITM2C-202ENST00000326427 RWDD1Q9H446 243 aaPredicted RBP28.15■■■□□ 2.1
ITM2C-202ENST00000326427 FYB1O15117 783 aa28.14■■■□□ 2.1
ITM2C-202ENST00000326427 TMPOP42166 694 aaKnown RBP28.14■■■□□ 2.1
ITM2C-202ENST00000326427 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms