RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 PRAG1Q86YV5 1406 aa16.94■□□□□ 0.3
LIN28A-202ENST00000326279 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
LIN28A-202ENST00000326279 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
LIN28A-202ENST00000326279 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
LIN28A-202ENST00000326279 RIPK4P57078 832 aa16.93■□□□□ 0.3
LIN28A-202ENST00000326279 EMILIN1Q9Y6C2 1016 aa16.93■□□□□ 0.3
LIN28A-202ENST00000326279 APBB1O00213 710 aa16.91■□□□□ 0.3
LIN28A-202ENST00000326279 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
LIN28A-202ENST00000326279 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
LIN28A-202ENST00000326279 PREX2Q70Z35 1606 aa16.9■□□□□ 0.3
LIN28A-202ENST00000326279 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
LIN28A-202ENST00000326279 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
LIN28A-202ENST00000326279 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
LIN28A-202ENST00000326279 SULT6B1Q6IMI4 303 aa16.89■□□□□ 0.29
LIN28A-202ENST00000326279 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
LIN28A-202ENST00000326279 USHBP1Q8N6Y0 703 aa16.89■□□□□ 0.29
LIN28A-202ENST00000326279 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
LIN28A-202ENST00000326279 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
LIN28A-202ENST00000326279 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
LIN28A-202ENST00000326279 CABLES1Q8TDN4 633 aa16.88■□□□□ 0.29
LIN28A-202ENST00000326279 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
LIN28A-202ENST00000326279 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
LIN28A-202ENST00000326279 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
LIN28A-202ENST00000326279 ACEP12821 1306 aa16.87■□□□□ 0.29
LIN28A-202ENST00000326279 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
LIN28A-202ENST00000326279 SCAF11Q99590 1463 aaKnown RBP16.87■□□□□ 0.29
LIN28A-202ENST00000326279 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
LIN28A-202ENST00000326279 RRP1P56182 461 aaKnown RBP16.86■□□□□ 0.29
LIN28A-202ENST00000326279 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
LIN28A-202ENST00000326279 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
LIN28A-202ENST00000326279 COL17A1Q9UMD9 1497 aaPredicted RBP16.85■□□□□ 0.29
LIN28A-202ENST00000326279 MLH3Q9UHC1 1453 aa16.85■□□□□ 0.29
LIN28A-202ENST00000326279 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
LIN28A-202ENST00000326279 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
LIN28A-202ENST00000326279 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
LIN28A-202ENST00000326279 EIF2S2P20042 333 aaKnown RBP16.84■□□□□ 0.29
LIN28A-202ENST00000326279 UHRF1BP1Q6BDS2 1440 aa16.84■□□□□ 0.29
LIN28A-202ENST00000326279 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
LIN28A-202ENST00000326279 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
LIN28A-202ENST00000326279 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
LIN28A-202ENST00000326279 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
LIN28A-202ENST00000326279 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.29
LIN28A-202ENST00000326279 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
LIN28A-202ENST00000326279 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
LIN28A-202ENST00000326279 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.28
LIN28A-202ENST00000326279 DCTN1Q14203 1278 aa16.82■□□□□ 0.28
LIN28A-202ENST00000326279 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
LIN28A-202ENST00000326279 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
LIN28A-202ENST00000326279 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
LIN28A-202ENST00000326279 COG6Q9Y2V7 657 aa16.81■□□□□ 0.28
LIN28A-202ENST00000326279 FYB1O15117 783 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 TEFQ10587 303 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
LIN28A-202ENST00000326279 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
LIN28A-202ENST00000326279 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
LIN28A-202ENST00000326279 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 METP08581 1390 aa16.78■□□□□ 0.28
LIN28A-202ENST00000326279 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.28
LIN28A-202ENST00000326279 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
LIN28A-202ENST00000326279 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.28
LIN28A-202ENST00000326279 NPHP1O15259 732 aa16.77■□□□□ 0.27
LIN28A-202ENST00000326279 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.27
LIN28A-202ENST00000326279 E9PSI1 815 aa16.76■□□□□ 0.27
LIN28A-202ENST00000326279 HSP90AA1P07900 732 aaKnown RBP16.76■□□□□ 0.27
LIN28A-202ENST00000326279 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
LIN28A-202ENST00000326279 YTHDC2Q9H6S0 1430 aaKnown RBP16.75■□□□□ 0.27
LIN28A-202ENST00000326279 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
LIN28A-202ENST00000326279 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
LIN28A-202ENST00000326279 BCAR3O75815 825 aa16.73■□□□□ 0.27
LIN28A-202ENST00000326279 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
LIN28A-202ENST00000326279 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
LIN28A-202ENST00000326279 MCM10Q7L590 875 aa16.72■□□□□ 0.27
LIN28A-202ENST00000326279 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
LIN28A-202ENST00000326279 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
LIN28A-202ENST00000326279 STK31Q9BXU1 1019 aa16.71■□□□□ 0.27
LIN28A-202ENST00000326279 ABCA9Q8IUA7 1624 aa16.71■□□□□ 0.27
LIN28A-202ENST00000326279 TSPYL4Q9UJ04 414 aa16.71■□□□□ 0.26
LIN28A-202ENST00000326279 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
LIN28A-202ENST00000326279 CADPS2Q86UW7 1296 aa16.7■□□□□ 0.26
LIN28A-202ENST00000326279 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
LIN28A-202ENST00000326279 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
LIN28A-202ENST00000326279 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
LIN28A-202ENST00000326279 EXOSC9Q06265 439 aaKnown RBP16.69■□□□□ 0.26
LIN28A-202ENST00000326279 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
LIN28A-202ENST00000326279 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
LIN28A-202ENST00000326279 KAT6BQ8WYB5 2073 aa16.68■□□□□ 0.26
LIN28A-202ENST00000326279 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
LIN28A-202ENST00000326279 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
LIN28A-202ENST00000326279 CALD1Q05682 793 aaKnown RBP16.68■□□□□ 0.26
LIN28A-202ENST00000326279 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
LIN28A-202ENST00000326279 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
LIN28A-202ENST00000326279 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
LIN28A-202ENST00000326279 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms